Definition Haemophilus influenzae Rd KW20 chromosome, complete genome.
Accession NC_000907
Length 1,830,138

Click here to switch to the map view.

The map label for this gene is ycbK [C]

Identifier: 16273552

GI number: 16273552

Start: 1733968

End: 1734090

Strand: Reverse

Name: ycbK [C]

Synonym: HI1665

Alternate gene names: 16273552

Gene position: 1734090-1733968 (Counterclockwise)

Preceding gene: 16273553

Following gene: 30995468

Centisome position: 94.75

GC content: 43.9

Gene sequence:

>123_bases
GTGCCTTTGATTAAAGTGAAATCTTCTGCGGAAAGTCTGCGAAATGGTGGCGTGGGTTATTATCCAACCAGTAATTTCAT
TCACGTAGATACAGGCCCTGTGAGAACTTGGAAAGGCGTGTAA

Upstream 100 bases:

>100_bases
GTTCAGCCTCTACTAATGCAATGCGTCGTCGCCAAAGTCGTGCGTAGCGAAAAATAGTTATCACATTAAAGGAAAAGCCA
TTGATTTTCGTATTGCGGGT

Downstream 100 bases:

>100_bases
AACAAATGTAAAATTAACCGCACTTTTGTGCGGTTTTTCATTGGAAAAGAAATGTTATTTGACAGCCATCTTCATTTAGA
CCAACTCTCTGACGAGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 39

Protein sequence:

>40_residues
MPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV

Sequences:

>Translated_40_residues
MPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV
>Mature_39_residues
PLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1665_HAEIN (P44283)

Other databases:

- EMBL:   L42023
- PIR:   E64039
- RefSeq:   NP_439807.1
- ProteinModelPortal:   P44283
- GeneID:   950493
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1665
- TIGR:   HI_1665
- BioCyc:   HINF71421:HI_1665-MONOMER
- InterPro:   IPR010275
- InterPro:   IPR009045
- Gene3D:   G3DSA:3.30.1380.10

Pfam domain/function: PF05951 Peptidase_M15_2

EC number: NA

Molecular weight: Translated: 4363; Mature: 4232

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV
CCEEECCCCCHHHHCCCCCCCCCCCEEEECCCCCEEECCC
>Mature Secondary Structure 
PLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV
CEEECCCCCHHHHCCCCCCCCCCCEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800