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The map label for this gene is yiaM [C]

Identifier: 16272964

GI number: 16272964

Start: 1095485

End: 1095970

Strand: Reverse

Name: yiaM [C]

Synonym: HI1030

Alternate gene names: 16272964

Gene position: 1095970-1095485 (Counterclockwise)

Preceding gene: 16272965

Following gene: 16272963

Centisome position: 59.88

GC content: 34.98

Gene sequence:

>486_bases
ATGATGAGATCTCTCGCCCACTTTATTAACAAAGCACTAGAGATACTTTGTATTTCTATTTTAGCCTTGATGTCCATTCT
AGTGTTTTTGAATGTCGTTTTACGCTATGGATTTAATAGTGGTATTAGTATAACTGAAGAAATTTCTCGTTATCTCTTTA
TTTGGCTGGCATTTTTAGGTGCGGTGTTAGCTTTCAATGAGAATCAACACGTTAGTGTCACTGTTTTGGTAAACAAGCTG
CCTCCATTTGGTCAAGCTATACTTAAATTTATTACAGATATGATGATGCTGATTTGTTGCTATCTCATCATTGAGGGCAG
TTGGATTCAATTTCAGCTTAATCTTAATAATTTCGCTCCTATTTCTGGATTACCTCAGGGACTAACTTACTTTGCAAGTG
TAATCGCAGGCATTTTAGTTAGCGCAATACTGATTACTCGCTTGATAAGCACAATATTCTTTATATTCAGAGGAGAAGTA
AAATGA

Upstream 100 bases:

>100_bases
GAGTTTGGGCAAAATTAAAGACGTTATAACAGCAATATGTTTCCAGTAAAACGCCATAATATAAAACGAATCACATTTGT
GATAATCAATTGGAGGTGTA

Downstream 100 bases:

>100_bases
CAGTGATTATTTTTCTTTCCGTCTTGCTTGGTACCATTATTCTTGGTGTACCTGTTGCCTTTGCCTTGCTAATTTGTGGA
ATAGCACTAATGCTCCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MMRSLAHFINKALEILCISILALMSILVFLNVVLRYGFNSGISITEEISRYLFIWLAFLGAVLAFNENQHVSVTVLVNKL
PPFGQAILKFITDMMMLICCYLIIEGSWIQFQLNLNNFAPISGLPQGLTYFASVIAGILVSAILITRLISTIFFIFRGEV
K

Sequences:

>Translated_161_residues
MMRSLAHFINKALEILCISILALMSILVFLNVVLRYGFNSGISITEEISRYLFIWLAFLGAVLAFNENQHVSVTVLVNKL
PPFGQAILKFITDMMMLICCYLIIEGSWIQFQLNLNNFAPISGLPQGLTYFASVIAGILVSAILITRLISTIFFIFRGEV
K
>Mature_161_residues
MMRSLAHFINKALEILCISILALMSILVFLNVVLRYGFNSGISITEEISRYLFIWLAFLGAVLAFNENQHVSVTVLVNKL
PPFGQAILKFITDMMMLICCYLIIEGSWIQFQLNLNNFAPISGLPQGLTYFASVIAGILVSAILITRLISTIFFIFRGEV
K

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family

Homologues:

Organism=Escherichia coli, GI1790002, Length=133, Percent_Identity=39.0977443609023, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1030_HAEIN (P44994)

Other databases:

- EMBL:   L42023
- PIR:   B64165
- RefSeq:   NP_439190.1
- GeneID:   950014
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1030
- NMPDR:   fig|71421.1.peg.992
- TIGR:   HI_1030
- HOGENOM:   HBG537868
- OMA:   GSMAAET
- ProtClustDB:   CLSK870420
- BioCyc:   HINF71421:HI_1030-MONOMER
- GO:   GO:0006810
- InterPro:   IPR007387

Pfam domain/function: PF04290 DctQ

EC number: NA

Molecular weight: Translated: 18070; Mature: 18070

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd4f9350)-; HASH(0xda8da2c)-; HASH(0xcd9a23c)-; HASH(0xdadb078)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSLAHFINKALEILCISILALMSILVFLNVVLRYGFNSGISITEEISRYLFIWLAFLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AVLAFNENQHVSVTVLVNKLPPFGQAILKFITDMMMLICCYLIIEGSWIQFQLNLNNFAP
HHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
ISGLPQGLTYFASVIAGILVSAILITRLISTIFFIFRGEVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MMRSLAHFINKALEILCISILALMSILVFLNVVLRYGFNSGISITEEISRYLFIWLAFLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AVLAFNENQHVSVTVLVNKLPPFGQAILKFITDMMMLICCYLIIEGSWIQFQLNLNNFAP
HHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
ISGLPQGLTYFASVIAGILVSAILITRLISTIFFIFRGEVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800