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The map label for this gene is yiaN [C]

Identifier: 16272963

GI number: 16272963

Start: 1094211

End: 1095488

Strand: Reverse

Name: yiaN [C]

Synonym: HI1029

Alternate gene names: 16272963

Gene position: 1095488-1094211 (Counterclockwise)

Preceding gene: 16272964

Following gene: 16272962

Centisome position: 59.86

GC content: 36.78

Gene sequence:

>1278_bases
ATGACAGTGATTATTTTTCTTTCCGTCTTGCTTGGTACCATTATTCTTGGTGTACCTGTTGCCTTTGCCTTGCTAATTTG
TGGAATAGCACTAATGCTCCATCTAGACTTTTTTAATGCACAAATACTTGCACAACAACTTGTCAGTGGCGCAGATAGTT
TTTCTCTAATGGCTATTCCCTTTTTTATCCTTGCTGGTGAAATAATGAATGAGGGAGGACTTTCTAAACGTATTATTGAT
TTACCTATGAAACTTGTAGGTCATAAACGAGGAGGGCTGGGATTTGTTGCTATTTTAAGTGCAATGATTATGGCAAGCTT
ATCTGGTTCGGCTGTTGCTGATACTGCTGCTGTAGCTGCTATGTTACTACCAATGATGAAAACCACAGGATATCCAATAC
ATCGTTCTGCTGGTTTAATCGGCACTGCTGGTATCATTGCTCCTATAATTCCTCCATCAATTCCTTTTATTGTCTTTGGT
GTTGCCAGTGGTGTATCTATCACTAAATTATTTTTAGCAGGTATTTTCCCTGGTGTGATTATGGGATGTTGCCTAGCTAT
TTTATGGCGGTGGCAAGCTAAACGCCTTAATTTAATGACATTTTCAAAAGCAACGAAACAAGATCTTTGTTTTTCTTTTA
AAAATAGTGTTTGGGCATTAATGCTACCAGTAATCATTATAGGAGGATTTCGTTCAGGTATATTTACACCTACTGAAGCT
GGTGTAGTTGCAACATTTTATGCATTAATTGTTTCTCTCTTTATATATCATGAATTACCCTTAAAACATTTGCCAAAAGT
ATTGTTAGCTGCAGCAAAAACCACCGCAGTTGTTATGTTTTTGGTTGCCTCAGCTAATGTAACTGGCTACTTAATTACTG
TTGCTGAACTTCCCACAATGCTGACAATATTGCTTGAACCTTTAATTGAAAATCCAACAATTTTACTTTTGGTCATTATG
CTTGCTGTATTTGTGATAGGAATGGTAATGGATTTAACACCAACAGTCTTAATTTTAACCCCCGTTTTAATGCCACTTGT
GGAAGAAGCTGGAATTGATCCAGTTTATTTCGGCGTATTGTTTATCTTAAATACCTCAATTGGCTTAATTACACCGCCCG
TGGGCAATGTGTTGAACGTTATCACTGGAGTATCAAAGCTTCCTTTTGATCAGGCTGCGAAAGGTATTATGCCCTATTTA
GGGATGATGATTATGTTATTACTTACCTTTATTTTTATTCCAGAACTAATTTTAATGCCACTACAATGGATCCAGTAA

Upstream 100 bases:

>100_bases
TAACTTACTTTGCAAGTGTAATCGCAGGCATTTTAGTTAGCGCAATACTGATTACTCGCTTGATAAGCACAATATTCTTT
ATATTCAGAGGAGAAGTAAA

Downstream 100 bases:

>100_bases
AACAGACTTTCTTAACACAAGGAGACTTTTATGAAACTTTTCAACTTCAAAAAGCTTAGCATGCTAATCGCTGGTTTTAC
GTTAGTTACTTCTCCAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MTVIIFLSVLLGTIILGVPVAFALLICGIALMLHLDFFNAQILAQQLVSGADSFSLMAIPFFILAGEIMNEGGLSKRIID
LPMKLVGHKRGGLGFVAILSAMIMASLSGSAVADTAAVAAMLLPMMKTTGYPIHRSAGLIGTAGIIAPIIPPSIPFIVFG
VASGVSITKLFLAGIFPGVIMGCCLAILWRWQAKRLNLMTFSKATKQDLCFSFKNSVWALMLPVIIIGGFRSGIFTPTEA
GVVATFYALIVSLFIYHELPLKHLPKVLLAAAKTTAVVMFLVASANVTGYLITVAELPTMLTILLEPLIENPTILLLVIM
LAVFVIGMVMDLTPTVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQAAKGIMPYL
GMMIMLLLTFIFIPELILMPLQWIQ

Sequences:

>Translated_425_residues
MTVIIFLSVLLGTIILGVPVAFALLICGIALMLHLDFFNAQILAQQLVSGADSFSLMAIPFFILAGEIMNEGGLSKRIID
LPMKLVGHKRGGLGFVAILSAMIMASLSGSAVADTAAVAAMLLPMMKTTGYPIHRSAGLIGTAGIIAPIIPPSIPFIVFG
VASGVSITKLFLAGIFPGVIMGCCLAILWRWQAKRLNLMTFSKATKQDLCFSFKNSVWALMLPVIIIGGFRSGIFTPTEA
GVVATFYALIVSLFIYHELPLKHLPKVLLAAAKTTAVVMFLVASANVTGYLITVAELPTMLTILLEPLIENPTILLLVIM
LAVFVIGMVMDLTPTVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQAAKGIMPYL
GMMIMLLLTFIFIPELILMPLQWIQ
>Mature_424_residues
TVIIFLSVLLGTIILGVPVAFALLICGIALMLHLDFFNAQILAQQLVSGADSFSLMAIPFFILAGEIMNEGGLSKRIIDL
PMKLVGHKRGGLGFVAILSAMIMASLSGSAVADTAAVAAMLLPMMKTTGYPIHRSAGLIGTAGIIAPIIPPSIPFIVFGV
ASGVSITKLFLAGIFPGVIMGCCLAILWRWQAKRLNLMTFSKATKQDLCFSFKNSVWALMLPVIIIGGFRSGIFTPTEAG
VVATFYALIVSLFIYHELPLKHLPKVLLAAAKTTAVVMFLVASANVTGYLITVAELPTMLTILLEPLIENPTILLLVIML
AVFVIGMVMDLTPTVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQAAKGIMPYLG
MMIMLLLTFIFIPELILMPLQWIQ

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family

Homologues:

Organism=Escherichia coli, GI48994950, Length=425, Percent_Identity=67.5294117647059, Blast_Score=525, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1029_HAEIN (P44993)

Other databases:

- EMBL:   L42023
- PIR:   A64165
- RefSeq:   NP_439189.1
- GeneID:   949652
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1029
- NMPDR:   fig|71421.1.peg.991
- TIGR:   HI_1029
- HOGENOM:   HBG563446
- OMA:   LVGHKRG
- ProtClustDB:   CLSK2299236
- BioCyc:   HINF71421:HI_1029-MONOMER
- GO:   GO:0006810
- InterPro:   IPR010656
- InterPro:   IPR004681
- TIGRFAMs:   TIGR00786

Pfam domain/function: PF06808 DctM

EC number: NA

Molecular weight: Translated: 45469; Mature: 45337

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xde68664)-; HASH(0xddeb9a0)-; HASH(0xd456c28)-; HASH(0xd364c14)-; HASH(0xe1403ac)-; HASH(0xda8404c)-; HASH(0xe1402e0)-; HASH(0xc927c88)-; HASH(0xd7a8d20)-; HASH(0xd64bda8)-; HASH(0xda96ba0)-; HASH(0xcbef0d0)-; HASH(0xdd326c0)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCH
>Mature Secondary Structure 
TVIIFLSVLLGTIILGVPVAFALLICGIALMLHLDFFNAQILAQQLVSGADSFSLMAIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
FFILAGEIMNEGGLSKRIIDLPMKLVGHKRGGLGFVAILSAMIMASLSGSAVADTAAVAA
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
MLLPMMKTTGYPIHRSAGLIGTAGIIAPIIPPSIPFIVFGVASGVSITKLFLAGIFPGVI
HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
MGCCLAILWRWQAKRLNLMTFSKATKQDLCFSFKNSVWALMLPVIIIGGFRSGIFTPTEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCC
GVVATFYALIVSLFIYHELPLKHLPKVLLAAAKTTAVVMFLVASANVTGYLITVAELPTM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
LTILLEPLIENPTILLLVIMLAVFVIGMVMDLTPTVLILTPVLMPLVEEAGIDPVYFGVL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHH
FILNTSIGLITPPVGNVLNVITGVSKLPFDQAAKGIMPYLGMMIMLLLTFIFIPELILMP
HHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQWIQ
HHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800