| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16272397
Identifier: 16272397
GI number: 16272397
Start: 472451
End: 472987
Strand: Reverse
Name: 16272397
Synonym: HI0449
Alternate gene names: NA
Gene position: 472987-472451 (Counterclockwise)
Preceding gene: 16272398
Following gene: 16272396
Centisome position: 25.84
GC content: 37.06
Gene sequence:
>537_bases ATGACTATGTTTAAAAAAATCTCTGTTTTATTTTTTACGTTAATATTGGCAGGTTGTTCTTCTTGGTCATCGGTTACTAA CTATATTCCATTTATGGGGAACGATAAAAAAGTGATTGATTTAGATAAAGATAAAATCGATCAAAAATCTTATGCAGCTG CTTATGAAGCGACTGTGGCGACATATAAAGGTCGCGTGAATGAAAATTTTTTTGTAGATAATTTTGCAAGTGGTGCGAAT GACTGGTATTTAGGCCGTATTTTAGTTCCAGTGAAACAAATTCAGGATAAACTTTATACAGGCGGCCATGATTCTGATGT ATATGCCTATTATAGCGGCGTGTTACATGCGGAAGCATTGCAAGCGAACCTTAAACGTTTGAGCGCAAATTGTTGGGAAA AAGTGGATTCGCAAAGTATGGCTCAAGGTATTTATGATGCGATGCGTGATTTACAAAAAGGCGAAGCGCGCGGAGAAAAT GATGAATATATTGTGCAAGGTAGTGAAGCGCTGCTGAAAGCCTGTACATCTAAATAA
Upstream 100 bases:
>100_bases TTATACGAAATTAACATTTGCCTAGATAAGCCTTACAGGCTTCCTTGCTTAATCCCCTTTAGACAGTATAATGGCGGCGT TTTATTAACTTTAATCGGGT
Downstream 100 bases:
>100_bases TTGTTTTTCAATAAGCTGCTGGTCGATTTGTTTCATCCGCAGCTTTCTTTTTAAATTATTAAGGAGCAAGAATGTTAGAA CTTTCGGAAAGCAACATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTMFKKISVLFFTLILAGCSSWSSVTNYIPFMGNDKKVIDLDKDKIDQKSYAAAYEATVATYKGRVNENFFVDNFASGAN DWYLGRILVPVKQIQDKLYTGGHDSDVYAYYSGVLHAEALQANLKRLSANCWEKVDSQSMAQGIYDAMRDLQKGEARGEN DEYIVQGSEALLKACTSK
Sequences:
>Translated_178_residues MTMFKKISVLFFTLILAGCSSWSSVTNYIPFMGNDKKVIDLDKDKIDQKSYAAAYEATVATYKGRVNENFFVDNFASGAN DWYLGRILVPVKQIQDKLYTGGHDSDVYAYYSGVLHAEALQANLKRLSANCWEKVDSQSMAQGIYDAMRDLQKGEARGEN DEYIVQGSEALLKACTSK >Mature_177_residues TMFKKISVLFFTLILAGCSSWSSVTNYIPFMGNDKKVIDLDKDKIDQKSYAAAYEATVATYKGRVNENFFVDNFASGAND WYLGRILVPVKQIQDKLYTGGHDSDVYAYYSGVLHAEALQANLKRLSANCWEKVDSQSMAQGIYDAMRDLQKGEARGEND EYIVQGSEALLKACTSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y449_HAEIN (P43997)
Other databases:
- EMBL: L42023 - PIR: F64007 - RefSeq: NP_438610.1 - GeneID: 949746 - GenomeReviews: L42023_GR - KEGG: hin:HI0449 - NMPDR: fig|71421.1.peg.423 - TIGR: HI_0449 - HOGENOM: HBG495031 - OMA: SGANDWY - ProtClustDB: CLSK870620 - BioCyc: HINF71421:HI_0449-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19919; Mature: 19787
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMFKKISVLFFTLILAGCSSWSSVTNYIPFMGNDKKVIDLDKDKIDQKSYAAAYEATVA CCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH TYKGRVNENFFVDNFASGANDWYLGRILVPVKQIQDKLYTGGHDSDVYAYYSGVLHAEAL HHCCCCCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QANLKRLSANCWEKVDSQSMAQGIYDAMRDLQKGEARGENDEYIVQGSEALLKACTSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCC >Mature Secondary Structure TMFKKISVLFFTLILAGCSSWSSVTNYIPFMGNDKKVIDLDKDKIDQKSYAAAYEATVA CHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH TYKGRVNENFFVDNFASGANDWYLGRILVPVKQIQDKLYTGGHDSDVYAYYSGVLHAEAL HHCCCCCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QANLKRLSANCWEKVDSQSMAQGIYDAMRDLQKGEARGENDEYIVQGSEALLKACTSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800