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The map label for this gene is comD

Identifier: 16272384

GI number: 16272384

Start: 458314

End: 458727

Strand: Reverse

Name: comD

Synonym: HI0436

Alternate gene names: 16272384

Gene position: 458727-458314 (Counterclockwise)

Preceding gene: 16272385

Following gene: 16272383

Centisome position: 25.07

GC content: 36.96

Gene sequence:

>414_bases
ATGAAACATTGGTTTTTCCTGATTATATTATTTTTTATGAATTGCAGTTGGGGACAAGATCCTTTCGATAAAACACAGCG
TAACCGTTCTCAGTTTGATAACGCACAAACAGTAATGGAGCAAACAGAAATAATTTCCTCAGATGTGCCTAATAATCTAT
GCGGAGCGGATGAAAATCGCCAAGCGGCTGAAATTCCTTTGAACGCTTTAAAATTGGTGGGGGTAGTGATTTCTAAAGAT
AAAGCCTTTGCCTTGTTGCAAGATCAAGGTTTGCAAGTTTACAGCGTTTTAGAGGGCGTTGATGTGGCTCAAGAGGGCTA
TATTGTAGAAAAAATCAACCAAAACAATGTTCAATTTATGCGTAAGCTAGGAGAGCAATGTGATAGTAGTGAATGGAAAA
AATTAAGTTTTTAA

Upstream 100 bases:

>100_bases
CTAATTCGTCACAGCTTTCTGTAAGTCGGTTGCAATTTATGAAACCCGAAGACGGCCCATTGCAAACCGAGATCATTTTT
CAGCTAGATAAGGAAACAAA

Downstream 100 bases:

>100_bases
AGGAAGATTATGAAGAAATATTTTTTAAAGTGCGGTTATTTTTTAGTATGTTTTTGTTTGCCATTAATCGTTTTTGCTAA
TCCTAAAACAGATAACGAAC

Product: competence protein D

Products: NA

Alternate protein names: DNA transformation protein ComD

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKHWFFLIILFFMNCSWGQDPFDKTQRNRSQFDNAQTVMEQTEIISSDVPNNLCGADENRQAAEIPLNALKLVGVVISKD
KAFALLQDQGLQVYSVLEGVDVAQEGYIVEKINQNNVQFMRKLGEQCDSSEWKKLSF

Sequences:

>Translated_137_residues
MKHWFFLIILFFMNCSWGQDPFDKTQRNRSQFDNAQTVMEQTEIISSDVPNNLCGADENRQAAEIPLNALKLVGVVISKD
KAFALLQDQGLQVYSVLEGVDVAQEGYIVEKINQNNVQFMRKLGEQCDSSEWKKLSF
>Mature_137_residues
MKHWFFLIILFFMNCSWGQDPFDKTQRNRSQFDNAQTVMEQTEIISSDVPNNLCGADENRQAAEIPLNALKLVGVVISKD
KAFALLQDQGLQVYSVLEGVDVAQEGYIVEKINQNNVQFMRKLGEQCDSSEWKKLSF

Specific function: Involved in transformation (competence for DNA uptake)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COMD_HAEIN (P31771)

Other databases:

- EMBL:   M62809
- EMBL:   L42023
- PIR:   I64067
- RefSeq:   NP_438597.1
- GeneID:   950663
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0436
- NMPDR:   fig|71421.1.peg.410
- TIGR:   HI_0436
- HOGENOM:   HBG095890
- ProtClustDB:   CLSK808412
- BioCyc:   HINF71421:HI_0436-MONOMER
- InterPro:   IPR016506
- InterPro:   IPR007446
- PIRSF:   PIRSF007059

Pfam domain/function: PF04351 PilP

EC number: NA

Molecular weight: Translated: 15682; Mature: 15682

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHWFFLIILFFMNCSWGQDPFDKTQRNRSQFDNAQTVMEQTEIISSDVPNNLCGADENR
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QAAEIPLNALKLVGVVISKDKAFALLQDQGLQVYSVLEGVDVAQEGYIVEKINQNNVQFM
CHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCHHHCCEEEEECCCCHHHHH
RKLGEQCDSSEWKKLSF
HHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MKHWFFLIILFFMNCSWGQDPFDKTQRNRSQFDNAQTVMEQTEIISSDVPNNLCGADENR
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QAAEIPLNALKLVGVVISKDKAFALLQDQGLQVYSVLEGVDVAQEGYIVEKINQNNVQFM
CHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCHHHCCEEEEECCCCHHHHH
RKLGEQCDSSEWKKLSF
HHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800