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The map label for this gene is comC

Identifier: 16272385

GI number: 16272385

Start: 458724

End: 459245

Strand: Reverse

Name: comC

Synonym: HI0437

Alternate gene names: 16272385

Gene position: 459245-458724 (Counterclockwise)

Preceding gene: 16272386

Following gene: 16272384

Centisome position: 25.09

GC content: 37.74

Gene sequence:

>522_bases
ATGAAAGCTTTTTTTAACGATCCTTTTACTCCTTTTGGAAAATGGCTAAGTCAGCCTTTTTATGTGCACGGTTTAACCTT
TTTATTGCTATTAAGTGCGGTGATTTTTCGCCCCGTTTTAGATTATATAGAGGGGAGTTCACGTTTCCATGAAATTGAAA
ATGAGTTAGCGGTGAAACGTTCAGAATTGTTGCATCAACAGAAAATTTTAACCTCTTTACAACAGCAGTCGGAAAGTCGA
AAACTTTCTCCAGAACTGGCTGCACAAATTATTCCTTTGAATAAACAAATTCAACGTTTAGCTGCGCGTAACGGTTTATC
TCAGCATTTACGTTGGGAAATGGGGCAAAAGCCTATTTTGCATTTACAGCTTACAGGTCATTTTGAAAAAACGAAGACAT
TTTTATCCGCACTTTTGGCTAATTCGTCACAGCTTTCTGTAAGTCGGTTGCAATTTATGAAACCCGAAGACGGCCCATTG
CAAACCGAGATCATTTTTCAGCTAGATAAGGAAACAAAATGA

Upstream 100 bases:

>100_bases
AATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTTGAT
GTGGAACAAGGGGCGGAAAA

Downstream 100 bases:

>100_bases
AACATTGGTTTTTCCTGATTATATTATTTTTTATGAATTGCAGTTGGGGACAAGATCCTTTCGATAAAACACAGCGTAAC
CGTTCTCAGTTTGATAACGC

Product: competence protein C

Products: NA

Alternate protein names: DNA transformation protein ComC

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKRSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLSALLANSSQLSVSRLQFMKPEDGPL
QTEIIFQLDKETK

Sequences:

>Translated_173_residues
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKRSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLSALLANSSQLSVSRLQFMKPEDGPL
QTEIIFQLDKETK
>Mature_173_residues
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKRSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLSALLANSSQLSVSRLQFMKPEDGPL
QTEIIFQLDKETK

Specific function: Involved in transformation (competence for DNA uptake)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COMC_HAEIN (P31770)

Other databases:

- EMBL:   M62809
- EMBL:   L42023
- PIR:   A64068
- RefSeq:   NP_438598.1
- GeneID:   950528
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0437
- NMPDR:   fig|71421.1.peg.411
- TIGR:   HI_0437
- HOGENOM:   HBG495328
- OMA:   HINARIS
- ProtClustDB:   CLSK870406
- BioCyc:   HINF71421:HI_0437-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19941; Mature: 19941

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKR
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SELLHQQKILTSLQQQSESRKLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPIL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCEE
HLQLTGHFEKTKTFLSALLANSSQLSVSRLQFMKPEDGPLQTEIIFQLDKETK
EEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHEEECCCCC
>Mature Secondary Structure
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKR
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SELLHQQKILTSLQQQSESRKLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPIL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCEE
HLQLTGHFEKTKTFLSALLANSSQLSVSRLQFMKPEDGPLQTEIIFQLDKETK
EEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800