| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
Click here to switch to the map view.
The map label for this gene is 16272168
Identifier: 16272168
GI number: 16272168
Start: 219308
End: 220081
Strand: Direct
Name: 16272168
Synonym: HI0205
Alternate gene names: NA
Gene position: 219308-220081 (Clockwise)
Preceding gene: 16273684
Following gene: 16272169
Centisome position: 11.98
GC content: 31.14
Gene sequence:
>774_bases ATGAAAATTAGTTTTCATTCTGTGTTAATTGGATTAGCATCATTTATTGGTGTTCAACAAGGTGTAATAGCTAATCCGTC TTCTCATCAATCAATATCCACTGAATCAGCTGAGGCTTTGAAGCAACAATTTTCAATGGCTTTAGCTAAACAAGATAAAC AACAAATTACAAATTTACAAAAAAAACTTACCGCACTTTTTTCTTTACCTCCCCAATTTCTTGATAATCAGATCCAAATA AGCGAAAAAATCCTCACTCGCATTTTTAAAACAGATAAAAATCTCACGCCTAAATTTCTTGATTACTTATACTTTGAGCC AATAAATACTGTTGATGCTAATTTAATTCAGGAAATGAAGAAAAACTTACTGGTGTCTTTTTTAGCAAATGATCAGGCAA AAATTTATATTCGTCAAACAGATAATTCAGAGCAATTTGTTCAGACTTTAATGGAGCGGGGAGCAAAAGCAGATCAAATT ATATTACTGTCTTTGAATGCCAAAGGTATATTTCAAAAAATTATTGAACAAATACGTCAAGATTTTCCGAATCAGACTAT TTTTTCGATTACTGAAAATCGTATTAGTTTGATTACTCCTTCTTCAGAAATTAAGTCTCGCCTTGCTTTAGCAAATATGA TGTTCAATCGCCAATTTAAAGGTGTGGAAGTTGATGATTTCTCATATTTAGATCAACCTCGAGAAAATTTACAGCACAAT AATGATGCAATTCGTTACAAAACCTTTCAAGCAATGCTAGAAGGTTTAAATTAA
Upstream 100 bases:
>100_bases GTTTTACGATATAATACGAGGCATCCAGCTGTTTTAGGTCAAATTTACGCGTATAGCGGTATTTTAGCTTGATAAAATAT CAGTTAAATGAGGTTTATAT
Downstream 100 bases:
>100_bases TCCCTTACCAATAGGAGTTTTTATGCTTTTATCCAAAAAATCAGCCTCCTTTGCACTCAGTGCATTTGCGATGCTTTTCA CTAGTGTAGCTCTTGCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKISFHSVLIGLASFIGVQQGVIANPSSHQSISTESAEALKQQFSMALAKQDKQQITNLQKKLTALFSLPPQFLDNQIQI SEKILTRIFKTDKNLTPKFLDYLYFEPINTVDANLIQEMKKNLLVSFLANDQAKIYIRQTDNSEQFVQTLMERGAKADQI ILLSLNAKGIFQKIIEQIRQDFPNQTIFSITENRISLITPSSEIKSRLALANMMFNRQFKGVEVDDFSYLDQPRENLQHN NDAIRYKTFQAMLEGLN
Sequences:
>Translated_257_residues MKISFHSVLIGLASFIGVQQGVIANPSSHQSISTESAEALKQQFSMALAKQDKQQITNLQKKLTALFSLPPQFLDNQIQI SEKILTRIFKTDKNLTPKFLDYLYFEPINTVDANLIQEMKKNLLVSFLANDQAKIYIRQTDNSEQFVQTLMERGAKADQI ILLSLNAKGIFQKIIEQIRQDFPNQTIFSITENRISLITPSSEIKSRLALANMMFNRQFKGVEVDDFSYLDQPRENLQHN NDAIRYKTFQAMLEGLN >Mature_257_residues MKISFHSVLIGLASFIGVQQGVIANPSSHQSISTESAEALKQQFSMALAKQDKQQITNLQKKLTALFSLPPQFLDNQIQI SEKILTRIFKTDKNLTPKFLDYLYFEPINTVDANLIQEMKKNLLVSFLANDQAKIYIRQTDNSEQFVQTLMERGAKADQI ILLSLNAKGIFQKIIEQIRQDFPNQTIFSITENRISLITPSSEIKSRLALANMMFNRQFKGVEVDDFSYLDQPRENLQHN NDAIRYKTFQAMLEGLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y205_HAEIN (P43963)
Other databases:
- EMBL: L42023 - PIR: H64003 - RefSeq: NP_438374.1 - GeneID: 951114 - GenomeReviews: L42023_GR - KEGG: hin:HI0205 - NMPDR: fig|71421.1.peg.195 - TIGR: HI_0205 - HOGENOM: HBG495277 - OMA: ITENRIS - ProtClustDB: CLSK808389 - BioCyc: HINF71421:HI_0205-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29411; Mature: 29411
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISFHSVLIGLASFIGVQQGVIANPSSHQSISTESAEALKQQFSMALAKQDKQQITNLQ CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KKLTALFSLPPQFLDNQIQISEKILTRIFKTDKNLTPKFLDYLYFEPINTVDANLIQEMK HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH KNLLVSFLANDQAKIYIRQTDNSEQFVQTLMERGAKADQIILLSLNAKGIFQKIIEQIRQ HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHH DFPNQTIFSITENRISLITPSSEIKSRLALANMMFNRQFKGVEVDDFSYLDQPRENLQHN HCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCCC NDAIRYKTFQAMLEGLN CCHHHHHHHHHHHHCCC >Mature Secondary Structure MKISFHSVLIGLASFIGVQQGVIANPSSHQSISTESAEALKQQFSMALAKQDKQQITNLQ CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KKLTALFSLPPQFLDNQIQISEKILTRIFKTDKNLTPKFLDYLYFEPINTVDANLIQEMK HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH KNLLVSFLANDQAKIYIRQTDNSEQFVQTLMERGAKADQIILLSLNAKGIFQKIIEQIRQ HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHH DFPNQTIFSITENRISLITPSSEIKSRLALANMMFNRQFKGVEVDDFSYLDQPRENLQHN HCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCCC NDAIRYKTFQAMLEGLN CCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023