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The map label for this gene is selD [H]

Identifier: 16273684

GI number: 16273684

Start: 215881

End: 216921

Strand: Direct

Name: selD [H]

Synonym: HI0200m

Alternate gene names: 16273684

Gene position: 215881-216921 (Clockwise)

Preceding gene: 16272163

Following gene: 16272168

Centisome position: 11.8

GC content: 40.92

Gene sequence:

>1041_bases
ATGGAAGAAAAAATTCGGCTGACGCAATACAGCCATGGTGCAGGTTGAGGCTGTAAAATTTCGCCTAAGGTGTTAGGGAC
AATTTTACATTCAGAACTGGAAAAATTTTATGATCCAAATCTGATCGTTGGCAATGAAACTGCAGACGATGCGGCGGTGT
ATGATCTTGGTAATGGAACTGCAATTATCAGTACCACAGACTTTTTCATGCCGATTGTGGATGATCCTTTTGATTTTGGA
CGAATTGCTGCGACCAATGCCATCAGTGATATTTTTGCTATGGGCGGTAAGCCGATAATGGGAATTGCTATTTTAGGTTT
TCCAACCAATGTATTACCTGCAGAAGTTGCACAGAAAATTGTTGATGGTGGGCGTTTTGCTTGCCATCAAGCGGGGATTG
CTTTGGCGGGTGGACATTCCATTGATTCGCCTGAACCTATTTTTGGTTTAGCCGTGACAGGCGTGATTGACACTGAAAAA
GTGAAACGTAATGCTTCTGCAAAATCAGGTTGTAAGCTTTATATGACGAAACCGCTTGGTATTGGTATTTTGACGACGGC
GGAAAAAAAAGGAAAACTAAAACCAGAACATCAAGGTTTAGCCACTGCCGCTATGTGCCAAATGAATTCTATTGGTAGTC
AATTTTCCCAAGTGGATGGCGTCACCGCAATGACGGATGTCACTGGATTTGGTTTACTTGGTCATTTAATTGAAATCTGT
GAAGGTTCAAATCTAAGTGCGGTAGTTTTTTCGGACAAAATTAAAACCTTGGACGGTGTAAAAGATTATATTGCTCAAGG
TTGCGTACCGGGTGGAACAGGGCGTAATTTTGACAGTTATGGACATAAAGTTGGGATATTGACGGAAGAACAAAAAGCGA
TTTTGTGTGATCCTCAAACATCAGGCGGCTTATTAGTGGCAGTTGAGCTTAATAGCGTTCAAACAGTAATTGACATAGCC
AAAGATGCGGGGATTGATTTATATGAAGTGGGTAAATTGAAACCTAAATCAGAATCCGATATCGTTGTTGAAGTAAAATA
A

Upstream 100 bases:

>100_bases
ATTATTGCGTACAAGGAAAGATGGCGAAGATCTTTATGATTAAAAATAGGGTTTGAAAGTCATATTCTCGAAAACGGATA
TTCAATAAGGTAAATAAGAA

Downstream 100 bases:

>100_bases
GGAATTTTAATCGATCCTCCCTAATGATTAATTAAATTACCATGATCCACATAGCAAAAAACCTTGGAATATCCCAAGGT
TTTTTAGATTATCATTAAAT

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MEEKIRLTQYSHGAGXGCKISPKVLGTILHSELEKFYDPNLIVGNETADDAAVYDLGNGTAIISTTDFFMPIVDDPFDFG
RIAATNAISDIFAMGGKPIMGIAILGFPTNVLPAEVAQKIVDGGRFACHQAGIALAGGHSIDSPEPIFGLAVTGVIDTEK
VKRNASAKSGCKLYMTKPLGIGILTTAEKKGKLKPEHQGLATAAMCQMNSIGSQFSQVDGVTAMTDVTGFGLLGHLIEIC
EGSNLSAVVFSDKIKTLDGVKDYIAQGCVPGGTGRNFDSYGHKVGILTEEQKAILCDPQTSGGLLVAVELNSVQTVIDIA
KDAGIDLYEVGKLKPKSESDIVVEVK

Sequences:

>Translated_346_residues
MEEKIRLTQYSHGAG*GCKISPKVLGTILHSELEKFYDPNLIVGNETADDAAVYDLGNGTAIISTTDFFMPIVDDPFDFG
RIAATNAISDIFAMGGKPIMGIAILGFPTNVLPAEVAQKIVDGGRFACHQAGIALAGGHSIDSPEPIFGLAVTGVIDTEK
VKRNASAKSGCKLYMTKPLGIGILTTAEKKGKLKPEHQGLATAAMCQMNSIGSQFSQVDGVTAMTDVTGFGLLGHLIEIC
EGSNLSAVVFSDKIKTLDGVKDYIAQGCVPGGTGRNFDSYGHKVGILTEEQKAILCDPQTSGGLLVAVELNSVQTVIDIA
KDAGIDLYEVGKLKPKSESDIVVEVK
>Mature_346_residues
MEEKIRLTQYSHGAG*GCKISPKVLGTILHSELEKFYDPNLIVGNETADDAAVYDLGNGTAIISTTDFFMPIVDDPFDFG
RIAATNAISDIFAMGGKPIMGIAILGFPTNVLPAEVAQKIVDGGRFACHQAGIALAGGHSIDSPEPIFGLAVTGVIDTEK
VKRNASAKSGCKLYMTKPLGIGILTTAEKKGKLKPEHQGLATAAMCQMNSIGSQFSQVDGVTAMTDVTGFGLLGHLIEIC
EGSNLSAVVFSDKIKTLDGVKDYIAQGCVPGGTGRNFDSYGHKVGILTEEQKAILCDPQTSGGLLVAVELNSVQTVIDIA
KDAGIDLYEVGKLKPKSESDIVVEVK

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=265, Percent_Identity=30.188679245283, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI15011844, Length=196, Percent_Identity=32.6530612244898, Blast_Score=86, Evalue=4e-17,
Organism=Escherichia coli, GI1788062, Length=345, Percent_Identity=66.9565217391304, Blast_Score=478, Evalue=1e-136,
Organism=Caenorhabditis elegans, GI17543426, Length=360, Percent_Identity=25, Blast_Score=95, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24653602, Length=268, Percent_Identity=27.9850746268657, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24653604, Length=268, Percent_Identity=27.9850746268657, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28574118, Length=305, Percent_Identity=27.8688524590164, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28574119, Length=373, Percent_Identity=26.0053619302949, Blast_Score=82, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36232; Mature: 36232

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKIRLTQYSHGAGGCKISPKVLGTILHSELEKFYDPNLIVGNETADDAAVYDLGNGTA
CCCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEECCCCEE
IISTTDFFMPIVDDPFDFGRIAATNAISDIFAMGGKPIMGIAILGFPTNVLPAEVAQKIV
EEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHH
DGGRFACHQAGIALAGGHSIDSPEPIFGLAVTGVIDTEKVKRNASAKSGCKLYMTKPLGI
CCCCEEEHHCCEEEECCCCCCCCCCEEEEEEECEECHHHHHHCCCCCCCCEEEEECCCCE
GILTTAEKKGKLKPEHQGLATAAMCQMNSIGSQFSQVDGVTAMTDVTGFGLLGHLIEICE
EEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHC
GSNLSAVVFSDKIKTLDGVKDYIAQGCVPGGTGRNFDSYGHKVGILTEEQKAILCDPQTS
CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCEEEEEECCCCEEEECCCCC
GGLLVAVELNSVQTVIDIAKDAGIDLYEVGKLKPKSESDIVVEVK
CCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MEEKIRLTQYSHGAGGCKISPKVLGTILHSELEKFYDPNLIVGNETADDAAVYDLGNGTA
CCCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEECCCCEE
IISTTDFFMPIVDDPFDFGRIAATNAISDIFAMGGKPIMGIAILGFPTNVLPAEVAQKIV
EEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHH
DGGRFACHQAGIALAGGHSIDSPEPIFGLAVTGVIDTEKVKRNASAKSGCKLYMTKPLGI
CCCCEEEHHCCEEEECCCCCCCCCCEEEEEEECEECHHHHHHCCCCCCCCEEEEECCCCE
GILTTAEKKGKLKPEHQGLATAAMCQMNSIGSQFSQVDGVTAMTDVTGFGLLGHLIEICE
EEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHC
GSNLSAVVFSDKIKTLDGVKDYIAQGCVPGGTGRNFDSYGHKVGILTEEQKAILCDPQTS
CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCEEEEEECCCCEEEECCCCC
GGLLVAVELNSVQTVIDIAKDAGIDLYEVGKLKPKSESDIVVEVK
CCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA