| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is hemR [H]
Identifier: 16272087
GI number: 16272087
Start: 120441
End: 122675
Strand: Direct
Name: hemR [H]
Synonym: HI0113
Alternate gene names: 16272087
Gene position: 120441-122675 (Clockwise)
Preceding gene: 16272085
Following gene: 16273671
Centisome position: 6.58
GC content: 32.63
Gene sequence:
>2235_bases ATGAATATTTTAATTAATAAACGTATCTTTTTATTAGTTACCCTTGTAGGTATTCAACTAAATGTAACCGCAAAACAAAA TTCTTCTAATTCTAATAGAGAGGAGTTATTACCTATTATTGTGAACACTAATGATGATAGTAATAAACTACCTGGTCGTT CAGTATTAAAACAGAAAAATATCGAACAACKACAAGCGGATAATGCAGCAAATTTAATTAATATCTTGCCAGGTGTGAAT ATGGCTGGCGGGTTTCGCCCTGGTGGGCAAACATTAAATATTAATGGAATGGGTGATGCTGAAGATGTTAGAGTGCAGTT AGATGGGGCTACAAAAAGTTTTGAAAAATACCAACAGGGTTCTATTTTTATTGAGCCTGAATTATTAAGAAGAGTAACAG TAGACAAAGGAAATTATTCTCCTCAATATGGTAATGGTGGTTTTGCTGGAACAGTAAAATTTGAAACTAAGGATGCTAGG GATTTCTTGCAAGAAAACCAGAAAATAGGTGGTTTTTTAAAGTATGGAAATAATAGCAATAATAACCAAAAAACTTATAG TACTGCACTAGTTTTACAAAATGAACAAAAAAATATTGATTTATTACTATTTGGTTCTGTAAGAAATGCTGGCGATTATA AAAGACCCGATAATAGCAAAATTCTTTTTTCAAAAAATAATCAAAAAACCGGATTAATAAAATTAAATTGGCAAATTTCA CCCGAGCATTTACTCACATTATCGAGTGTTTATGGTATTCATAAAGGCTGGGAGCCTTTCGCAGCGAAAAGAGATATCCT ACCTAAACCAAGTTTGAGTGATATAATGCGTTATGGTACTGATATAGCGTGGAAACGTAAACTGGTTTATCGAGATCAAA AAGATGAAAATTACACATTAAAATACAACTATCTACCTGAAAATAACCCATGGATTAACTTATCTACTCAGTTCAGCTAC AGTAAAACCACACAAAATGATATGCGTCCCAAAGAAGCATCTTCAGGATTAGTGGGTAGCTTAGGTAATCAAAGCTGGAT AACTTATTCAGATCTTACTTTTGATATAAATAACACAAGTACTTTTAATATCAAAACTACTGTTCATGAACTATTATTTG GTTTGCAATGGTTAAAAAACACAAGAAATACTTTAATGTATGATAAAAGTAAAGTGAGAAAAGCGGATTATAATTATGGC TATTTCCAACCCTATTATATGCCATCTGGACGTCAATATACACAGGCGTTTTATTTACAAGATCAAATAAAATGGAAGAA TATAATTTTTAGCACAGGAGTGCGTTATGACCATATCAATAATATAGGGCAGAAAAATTTAGCACTAAAATATAATGATA TCTCTGCAGGACATGATTATAGCCAGAAAAATTATAATGGTTGGTCTTATTATTTAGGTTTAAATTATGATGTAAACCAT TATTTAAGTTTATTTACGAATTTTAGTAAAACTTGGCGAGCACCTGTTATTGATGAACAGTATGAGACGCAATTTAAGCA ATCTTCTGTGCCTGCAACCTCTTTAAATTTAGAAAAAGAAATGATTAATCAAACGAGAGTGGGTGGAATTATTACTCTCA ATCATCTATTTCAGGAAAATGATGCTTTTCAATTTAGAACTACTTATTTTTACAATCGCGGCAAGAATGAAATATTTAAA ACCAGAGGAGTTAATTGTGTAGGCAATGCTGCAGATACCAATAATAAGGTTTGTCCTAAAATCATTGAAAATTATCGTAA TTTGCCAGGTTATGTTATTCAAGGTGCAGAGTTAGAAGCTTATTATCAATCTACTTATTTATTTGGTGAGATAACATATT CTTATGTAAAAGGAAAACGTGACACCTCACCAAGAAACCCATGGGGTAAAACCTCAACATGGATTGCTGAAATTCCCCCT AGAAAAGCAACTACTGCTTTAGGTTTCAATGTTCCAAAATATTATCTCACAGTAGGTTGGCGTGCTGAGTTTGTAAGAAG ACAAGATCGATCGCCATTATCTGGTGATCCTAAAGCATCATCTTGGTCATTGCCAGCTTCAAGAGGATACAGCCTACATA ACCTATTCCTTTCTTGGAGCCCTGCAAAAATTAAAGGTATGAATGTTAAGATTACAGTGGATAATTTATTCAATCGAGCA TACAACCCTTATCTAGGCGAATTGGCTTCTGGAACAGGTAGGAATATCAAATTTAGCCTATCTCAGAAATTTTAG
Upstream 100 bases:
>100_bases GCATCTTACAATTAATTTATATAAGTAAAAATATCTTGCTTTTATCATCGTTAAACTTAGAATAAATATAAATAATTATC ATTAAGATTTAAGGGTATAT
Downstream 100 bases:
>100_bases AATAAATAGCCCGATTGAATCTAATCGGGCTTTATCATAACTATAATTAGATCATAAAAAAATGTAGAGATAATAAATAT AATTTCCTATACTAATTTTA
Product: hemin receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 744; Mature: 744
Protein sequence:
>744_residues MNILINKRIFLLVTLVGIQLNVTAKQNSSNSNREELLPIIVNTNDDSNKLPGRSVLKQKNIEQXQADNAANLINILPGVN MAGGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQGSIFIEPELLRRVTVDKGNYSPQYGNGGFAGTVKFETKDAR DFLQENQKIGGFLKYGNNSNNNQKTYSTALVLQNEQKNIDLLLFGSVRNAGDYKRPDNSKILFSKNNQKTGLIKLNWQIS PEHLLTLSSVYGIHKGWEPFAAKRDILPKPSLSDIMRYGTDIAWKRKLVYRDQKDENYTLKYNYLPENNPWINLSTQFSY SKTTQNDMRPKEASSGLVGSLGNQSWITYSDLTFDINNTSTFNIKTTVHELLFGLQWLKNTRNTLMYDKSKVRKADYNYG YFQPYYMPSGRQYTQAFYLQDQIKWKNIIFSTGVRYDHINNIGQKNLALKYNDISAGHDYSQKNYNGWSYYLGLNYDVNH YLSLFTNFSKTWRAPVIDEQYETQFKQSSVPATSLNLEKEMINQTRVGGIITLNHLFQENDAFQFRTTYFYNRGKNEIFK TRGVNCVGNAADTNNKVCPKIIENYRNLPGYVIQGAELEAYYQSTYLFGEITYSYVKGKRDTSPRNPWGKTSTWIAEIPP RKATTALGFNVPKYYLTVGWRAEFVRRQDRSPLSGDPKASSWSLPASRGYSLHNLFLSWSPAKIKGMNVKITVDNLFNRA YNPYLGELASGTGRNIKFSLSQKF
Sequences:
>Translated_744_residues MNILINKRIFLLVTLVGIQLNVTAKQNSSNSNREELLPIIVNTNDDSNKLPGRSVLKQKNIEQXQADNAANLINILPGVN MAGGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQGSIFIEPELLRRVTVDKGNYSPQYGNGGFAGTVKFETKDAR DFLQENQKIGGFLKYGNNSNNNQKTYSTALVLQNEQKNIDLLLFGSVRNAGDYKRPDNSKILFSKNNQKTGLIKLNWQIS PEHLLTLSSVYGIHKGWEPFAAKRDILPKPSLSDIMRYGTDIAWKRKLVYRDQKDENYTLKYNYLPENNPWINLSTQFSY SKTTQNDMRPKEASSGLVGSLGNQSWITYSDLTFDINNTSTFNIKTTVHELLFGLQWLKNTRNTLMYDKSKVRKADYNYG YFQPYYMPSGRQYTQAFYLQDQIKWKNIIFSTGVRYDHINNIGQKNLALKYNDISAGHDYSQKNYNGWSYYLGLNYDVNH YLSLFTNFSKTWRAPVIDEQYETQFKQSSVPATSLNLEKEMINQTRVGGIITLNHLFQENDAFQFRTTYFYNRGKNEIFK TRGVNCVGNAADTNNKVCPKIIENYRNLPGYVIQGAELEAYYQSTYLFGEITYSYVKGKRDTSPRNPWGKTSTWIAEIPP RKATTALGFNVPKYYLTVGWRAEFVRRQDRSPLSGDPKASSWSLPASRGYSLHNLFLSWSPAKIKGMNVKITVDNLFNRA YNPYLGELASGTGRNIKFSLSQKF >Mature_744_residues MNILINKRIFLLVTLVGIQLNVTAKQNSSNSNREELLPIIVNTNDDSNKLPGRSVLKQKNIEQXQADNAANLINILPGVN MAGGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQGSIFIEPELLRRVTVDKGNYSPQYGNGGFAGTVKFETKDAR DFLQENQKIGGFLKYGNNSNNNQKTYSTALVLQNEQKNIDLLLFGSVRNAGDYKRPDNSKILFSKNNQKTGLIKLNWQIS PEHLLTLSSVYGIHKGWEPFAAKRDILPKPSLSDIMRYGTDIAWKRKLVYRDQKDENYTLKYNYLPENNPWINLSTQFSY SKTTQNDMRPKEASSGLVGSLGNQSWITYSDLTFDINNTSTFNIKTTVHELLFGLQWLKNTRNTLMYDKSKVRKADYNYG YFQPYYMPSGRQYTQAFYLQDQIKWKNIIFSTGVRYDHINNIGQKNLALKYNDISAGHDYSQKNYNGWSYYLGLNYDVNH YLSLFTNFSKTWRAPVIDEQYETQFKQSSVPATSLNLEKEMINQTRVGGIITLNHLFQENDAFQFRTTYFYNRGKNEIFK TRGVNCVGNAADTNNKVCPKIIENYRNLPGYVIQGAELEAYYQSTYLFGEITYSYVKGKRDTSPRNPWGKTSTWIAEIPP RKATTALGFNVPKYYLTVGWRAEFVRRQDRSPLSGDPKASSWSLPASRGYSLHNLFLSWSPAKIKGMNVKITVDNLFNRA YNPYLGELASGTGRNIKFSLSQKF
Specific function: Heme receptor [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR011276 - InterPro: IPR010949 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 84991; Mature: 84991
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILINKRIFLLVTLVGIQLNVTAKQNSSNSNREELLPIIVNTNDDSNKLPGRSVLKQKN CCEEECCHHEEEEEEECEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCC IEQXQADNAANLINILPGVNMAGGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQG CHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHHHHHCC SIFIEPELLRRVTVDKGNYSPQYGNGGFAGTVKFETKDARDFLQENQKIGGFLKYGNNSN CEEECHHHHHEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCEEEEECCCCC NNQKTYSTALVLQNEQKNIDLLLFGSVRNAGDYKRPDNSKILFSKNNQKTGLIKLNWQIS CCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEC PEHLLTLSSVYGIHKGWEPFAAKRDILPKPSLSDIMRYGTDIAWKRKLVYRDQKDENYTL HHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHCCCHHEEEEEEECCCCCCCEEE KYNYLPENNPWINLSTQFSYSKTTQNDMRPKEASSGLVGSLGNQSWITYSDLTFDINNTS EEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHCCCCEECCCCCCEEEEEEEEEEECCCE TFNIKTTVHELLFGLQWLKNTRNTLMYDKSKVRKADYNYGYFQPYYMPSGRQYTQAFYLQ EEEEHHHHHHHHHHHHHHHCCCHHEEECHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEH DQIKWKNIIFSTGVRYDHINNIGQKNLALKYNDISAGHDYSQKNYNGWSYYLGLNYDVNH HCCCEEEEEEECCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHH YLSLFTNFSKTWRAPVIDEQYETQFKQSSVPATSLNLEKEMINQTRVGGIITLNHLFQEN HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHCCC DAFQFRTTYFYNRGKNEIFKTRGVNCVGNAADTNNKVCPKIIENYRNLPGYVIQGAELEA CCEEEEEEEEEECCCCHHHHHCCCCEECCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEE YYQSTYLFGEITYSYVKGKRDTSPRNPWGKTSTWIAEIPPRKATTALGFNVPKYYLTVGW EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCEEEEEECC RAEFVRRQDRSPLSGDPKASSWSLPASRGYSLHNLFLSWSPAKIKGMNVKITVDNLFNRA HHHHHHHHCCCCCCCCCCCCCCCCCHHCCCEEEEEEEEECCCEEECCEEEEEHHHHHHHC YNPYLGELASGTGRNIKFSLSQKF CCCHHHHHCCCCCCEEEEEECCCC >Mature Secondary Structure MNILINKRIFLLVTLVGIQLNVTAKQNSSNSNREELLPIIVNTNDDSNKLPGRSVLKQKN CCEEECCHHEEEEEEECEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCC IEQXQADNAANLINILPGVNMAGGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQG CHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHHHHHCC SIFIEPELLRRVTVDKGNYSPQYGNGGFAGTVKFETKDARDFLQENQKIGGFLKYGNNSN CEEECHHHHHEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCEEEEECCCCC NNQKTYSTALVLQNEQKNIDLLLFGSVRNAGDYKRPDNSKILFSKNNQKTGLIKLNWQIS CCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEC PEHLLTLSSVYGIHKGWEPFAAKRDILPKPSLSDIMRYGTDIAWKRKLVYRDQKDENYTL HHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHCCCHHEEEEEEECCCCCCCEEE KYNYLPENNPWINLSTQFSYSKTTQNDMRPKEASSGLVGSLGNQSWITYSDLTFDINNTS EEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHCCCCEECCCCCCEEEEEEEEEEECCCE TFNIKTTVHELLFGLQWLKNTRNTLMYDKSKVRKADYNYGYFQPYYMPSGRQYTQAFYLQ EEEEHHHHHHHHHHHHHHHCCCHHEEECHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEH DQIKWKNIIFSTGVRYDHINNIGQKNLALKYNDISAGHDYSQKNYNGWSYYLGLNYDVNH HCCCEEEEEEECCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHH YLSLFTNFSKTWRAPVIDEQYETQFKQSSVPATSLNLEKEMINQTRVGGIITLNHLFQEN HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHCCC DAFQFRTTYFYNRGKNEIFKTRGVNCVGNAADTNNKVCPKIIENYRNLPGYVIQGAELEA CCEEEEEEEEEECCCCHHHHHCCCCEECCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEE YYQSTYLFGEITYSYVKGKRDTSPRNPWGKTSTWIAEIPPRKATTALGFNVPKYYLTVGW EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCEEEEEECC RAEFVRRQDRSPLSGDPKASSWSLPASRGYSLHNLFLSWSPAKIKGMNVKITVDNLFNRA HHHHHHHHCCCCCCCCCCCCCCCCCHHCCCEEEEEEEEECCCEEECCEEEEEHHHHHHHC YNPYLGELASGTGRNIKFSLSQKF CCCHHHHHCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA