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The map label for this gene is yiaM [C]

Identifier: 16272025

GI number: 16272025

Start: 52092

End: 52589

Strand: Reverse

Name: yiaM [C]

Synonym: HI0051

Alternate gene names: 16272025

Gene position: 52589-52092 (Counterclockwise)

Preceding gene: 16272026

Following gene: 16273630

Centisome position: 2.87

GC content: 31.33

Gene sequence:

>498_bases
ATGGGGGATAAAGAAGGAGCTTGTTTTATGAAAATAGCAAAGTATTTAGACAAAGCATTAGAATATCTTTCTATCTTGGC
ATTAGTTATTATGATTTCTCTCGTGTTTTTTAATTCTGTCTTGAGGTACTTCTTTGATTCTGGAATTGCATTTTCTGAAG
AGTTTTCTAGGATTTGTTTTGTATATATGATTTCCTTTGGGATTATACTTGTTGCCAAGGATAAAGCTCATCTTACTGTT
GATATTATTATTCCTGCGTTGCCTGAGCAGTATAGAAAAATAGTCTTAATAGTTGCAAATATATGCGTTCTGATTGCAAT
GATTTTTATAGCTTATGGTGCATTACAACTGATGTCTTTGACCTATACTCAACAAATGCCAGCTACAGGTATATCTTCAT
CTTTTTTATATTTAGCTGCTGTTATATCTGCCGTATCTTACTTTTTTATTGTCATGTTTAGCATGATTAAAGACTATAAA
GAATCCTCTGATAAATAG

Upstream 100 bases:

>100_bases
GTTTTTATAAAAAATATGATTGGGCTAAGGATGTAGTCCAAAAAATTAACGAAGCTAAATAATTAATAAGATCCCCTATG
TTCAATTTTATAAATTGCTC

Downstream 100 bases:

>100_bases
GAGCTTATAATGTTACTATTATTTTGTGTAGTTTATTCTTATTGTTATTTCTTGGTGTACCTGTAGCACTATCAATGCTG
TTGAGTGCGAGTATTATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MGDKEGACFMKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICFVYMISFGIILVAKDKAHLTV
DIIIPALPEQYRKIVLIVANICVLIAMIFIAYGALQLMSLTYTQQMPATGISSSFLYLAAVISAVSYFFIVMFSMIKDYK
ESSDK

Sequences:

>Translated_165_residues
MGDKEGACFMKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICFVYMISFGIILVAKDKAHLTV
DIIIPALPEQYRKIVLIVANICVLIAMIFIAYGALQLMSLTYTQQMPATGISSSFLYLAAVISAVSYFFIVMFSMIKDYK
ESSDK
>Mature_164_residues
GDKEGACFMKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICFVYMISFGIILVAKDKAHLTVD
IIIPALPEQYRKIVLIVANICVLIAMIFIAYGALQLMSLTYTQQMPATGISSSFLYLAAVISAVSYFFIVMFSMIKDYKE
SSDK

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y051_HAEIN (P44484)

Other databases:

- EMBL:   L42023
- PIR:   D64141
- RefSeq:   NP_438224.1
- GeneID:   950946
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0051
- NMPDR:   fig|71421.1.peg.50
- TIGR:   HI_0051
- HOGENOM:   HBG495101
- OMA:   RICFVYM
- ProtClustDB:   CLSK808375
- BioCyc:   HINF71421:HI_0051-MONOMER
- GO:   GO:0006810
- InterPro:   IPR007387

Pfam domain/function: PF04290 DctQ

EC number: NA

Molecular weight: Translated: 18581; Mature: 18449

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb1b277c)-; HASH(0xbbf93e0)-; HASH(0xbd61214)-; HASH(0xbe15158)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDKEGACFMKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VYMISFGIILVAKDKAHLTVDIIIPALPEQYRKIVLIVANICVLIAMIFIAYGALQLMSL
HHHHHHHHHEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYTQQMPATGISSSFLYLAAVISAVSYFFIVMFSMIKDYKESSDK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
GDKEGACFMKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VYMISFGIILVAKDKAHLTVDIIIPALPEQYRKIVLIVANICVLIAMIFIAYGALQLMSL
HHHHHHHHHEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYTQQMPATGISSSFLYLAAVISAVSYFFIVMFSMIKDYKESSDK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800