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The map label for this gene is yiaO [C]

Identifier: 16272026

GI number: 16272026

Start: 52628

End: 53614

Strand: Reverse

Name: yiaO [C]

Synonym: HI0052

Alternate gene names: 16272026

Gene position: 53614-52628 (Counterclockwise)

Preceding gene: 16272027

Following gene: 16272025

Centisome position: 2.93

GC content: 28.88

Gene sequence:

>987_bases
ATGAAATCAATTAAAGGCTTAGGTAAATTATTACTTGCTTCAAGTATATTGTTTAGTAGCAGTGCATTTGCAAAAACAAT
TATTAAGTTAGGACATTATAATTCTGATATTCATCCATCACATATTGCATTACAGGAATATTTTAAGAAAACAATTGAAA
ATGAAACAAATCATAAATATGAGATTAGACTTTATCCTAATAATCAACTTGGCGGTGAAGATCAAATTGTAAATGGATTA
CGTAATGGCACTATAGAAGCAGGTATTACAGGTTTATTATTGCAAAATGTAGATCCTATTTTTGGAGTTTGGGAATGGCC
TTATTTATTTAAGGATAATCAAGAGGCTAAAAAAGTATTGGAATCTCCAATCGCAAATAAAATTGGTCAAAAAATGGAGA
AGTATGGAATTAAATTACTTGCCTATGGTATGAATGGATTTCGTGTTATTTCATCTAATAAAAAATTAGAGAAATTTGAC
GATTTTAAAGGTTTACGTTTAAGAGTTCCGCTGAATTCACTTTTTGTTGATTGGGCTAAAGCAATGAATATAAATCCACA
AAGCATGCCGCTCAGTGAAGTTTTTACTGCATTAGAACAAAAGGTAATTGATGGTCAAGAAAATCCGTATATGTTAATTA
AAGACTCTGGGTTATATGAAGTACAAAAATATATTATCCAAAGTAACCATATTTTCTCTCCAGGATTATTACAAATTAGC
TTAAAAACTTGGAATAAAATTCCAAAAGAAGATCAAATTATTTTTGAAAAAGCAGCTAAATTGTATCAAGAGAAAGAGTG
GGAATTAGCAATTAAAACAGAATTAGAAGTTAAAGATTATCTAGCTAAACATGGAAATGAAATTATCGTACCAAGTGAAG
CATTTAAAAATGACATGGTGAATGCATCTAAGGTGCTTTATGATAGTTTTTATAAAAAATATGATTGGGCTAAGGATGTA
GTCCAAAAAATTAACGAAGCTAAATAA

Upstream 100 bases:

>100_bases
AAGAAATTCCTAGTTTTATTTCTGATTTATCTGATCATCCAGAAAATTATTTAAAAATTAATGCAGTTTTCTAAAAAACA
TAATCAATAAGGAGAAAGTT

Downstream 100 bases:

>100_bases
TTAATAAGATCCCCTATGTTCAATTTTATAAATTGCTCATGGGGGATAAAGAAGGAGCTTGTTTTATGAAAATAGCAAAG
TATTTAGACAAAGCATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKSIKGLGKLLLASSILFSSSAFAKTIIKLGHYNSDIHPSHIALQEYFKKTIENETNHKYEIRLYPNNQLGGEDQIVNGL
RNGTIEAGITGLLLQNVDPIFGVWEWPYLFKDNQEAKKVLESPIANKIGQKMEKYGIKLLAYGMNGFRVISSNKKLEKFD
DFKGLRLRVPLNSLFVDWAKAMNINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLYEVQKYIIQSNHIFSPGLLQIS
LKTWNKIPKEDQIIFEKAAKLYQEKEWELAIKTELEVKDYLAKHGNEIIVPSEAFKNDMVNASKVLYDSFYKKYDWAKDV
VQKINEAK

Sequences:

>Translated_328_residues
MKSIKGLGKLLLASSILFSSSAFAKTIIKLGHYNSDIHPSHIALQEYFKKTIENETNHKYEIRLYPNNQLGGEDQIVNGL
RNGTIEAGITGLLLQNVDPIFGVWEWPYLFKDNQEAKKVLESPIANKIGQKMEKYGIKLLAYGMNGFRVISSNKKLEKFD
DFKGLRLRVPLNSLFVDWAKAMNINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLYEVQKYIIQSNHIFSPGLLQIS
LKTWNKIPKEDQIIFEKAAKLYQEKEWELAIKTELEVKDYLAKHGNEIIVPSEAFKNDMVNASKVLYDSFYKKYDWAKDV
VQKINEAK
>Mature_328_residues
MKSIKGLGKLLLASSILFSSSAFAKTIIKLGHYNSDIHPSHIALQEYFKKTIENETNHKYEIRLYPNNQLGGEDQIVNGL
RNGTIEAGITGLLLQNVDPIFGVWEWPYLFKDNQEAKKVLESPIANKIGQKMEKYGIKLLAYGMNGFRVISSNKKLEKFD
DFKGLRLRVPLNSLFVDWAKAMNINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLYEVQKYIIQSNHIFSPGLLQIS
LKTWNKIPKEDQIIFEKAAKLYQEKEWELAIKTELEVKDYLAKHGNEIIVPSEAFKNDMVNASKVLYDSFYKKYDWAKDV
VQKINEAK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family

Homologues:

Organism=Escherichia coli, GI1790004, Length=323, Percent_Identity=26.9349845201238, Blast_Score=146, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y052_HAEIN (P71336)

Other databases:

- EMBL:   L42023
- PIR:   E64141
- RefSeq:   NP_438225.1
- ProteinModelPortal:   P71336
- SMR:   P71336
- GeneID:   950947
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0052
- NMPDR:   fig|71421.1.peg.51
- TIGR:   HI_0052
- HOGENOM:   HBG662660
- OMA:   EFRIAVG
- ProtClustDB:   CLSK628386
- BioCyc:   HINF71421:HI_0052-MONOMER
- GO:   GO:0006810
- InterPro:   IPR018389
- InterPro:   IPR004682
- TIGRFAMs:   TIGR00787

Pfam domain/function: PF03480 SBP_bac_7

EC number: NA

Molecular weight: Translated: 37617; Mature: 37617

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKGLGKLLLASSILFSSSAFAKTIIKLGHYNSDIHPSHIALQEYFKKTIENETNHKY
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEE
EIRLYPNNQLGGEDQIVNGLRNGTIEAGITGLLLQNVDPIFGVWEWPYLFKDNQEAKKVL
EEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCEEECCCHHHHHHH
ESPIANKIGQKMEKYGIKLLAYGMNGFRVISSNKKLEKFDDFKGLRLRVPLNSLFVDWAK
HHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCHHHHHCCCCCEEECCHHHHHHHHHH
AMNINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLYEVQKYIIQSNHIFSPGLLQIS
HCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEE
LKTWNKIPKEDQIIFEKAAKLYQEKEWELAIKTELEVKDYLAKHGNEIIVPSEAFKNDMV
EHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCEEEECCHHHHHHCC
NASKVLYDSFYKKYDWAKDVVQKINEAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSIKGLGKLLLASSILFSSSAFAKTIIKLGHYNSDIHPSHIALQEYFKKTIENETNHKY
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEE
EIRLYPNNQLGGEDQIVNGLRNGTIEAGITGLLLQNVDPIFGVWEWPYLFKDNQEAKKVL
EEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCEEECCCHHHHHHH
ESPIANKIGQKMEKYGIKLLAYGMNGFRVISSNKKLEKFDDFKGLRLRVPLNSLFVDWAK
HHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCHHHHHCCCCCEEECCHHHHHHHHHH
AMNINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLYEVQKYIIQSNHIFSPGLLQIS
HCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEE
LKTWNKIPKEDQIIFEKAAKLYQEKEWELAIKTELEVKDYLAKHGNEIIVPSEAFKNDMV
EHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCEEEECCHHHHHHCC
NASKVLYDSFYKKYDWAKDVVQKINEAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023