Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082567

Identifier: 99082567

GI number: 99082567

Start: 2870342

End: 2871370

Strand: Reverse

Name: 99082567

Synonym: TM1040_2727

Alternate gene names: NA

Gene position: 2871370-2870342 (Counterclockwise)

Preceding gene: 99082568

Following gene: 99082565

Centisome position: 89.7

GC content: 61.22

Gene sequence:

>1029_bases
ATGACCCTAACTGACGTGTTTGGCCTTGTGGGCGCGCTTGGCGTTGCCGTGCTTGGCACATTGATTTTTGAAGCGATTGG
ATTTCCCTCGGCCCCCCTGACCGGTTCAGCGGCAGCGGTGTCTCTGGCTGCACTGTTTGGTTTGCCGATCCGGATGCCCG
TGTGGCTCAGGACCACGGCCTTTGTGCTCTTGGGGATCAATATCGGCAGCAGCGTGACGCGTGAAATGCTGGCCTCGGCG
CTGGCATGGCCCGTGACCATTGCGATCCTTGCAGTGAGCCTCTTTGTGTCTTTGCAGATCAGCCGCATCGGTCTTGAGCG
CTGGATGCGGTTCAGTCCGCGTGATGCGGCTCTGGCGGCTGCGCCGGGGCATCTGAGCTATGTGCTGGCGCTGTCGCTCA
GTGACGGAGGGCAGACCTCTCGGATTGCGGTGGTCCAGAGCATCCGGGTGCTGTTTCTCACCCTTTGTGTGCCGGTGCTG
GTCTCGTTGGTGTTTGGCGCAACGGGTGTGGAGCTCATGCCCGAATATGTGCTCTCAAACTGGCATCTGGCGGCTTTGGT
GGGGGTCACTTTGGTGGTGGGCGCAGTGTTTGATCGATTGAACATTCCCGCCGCCTATTTGCTGGCGGGCATCTTTTGCA
GCGCCGCCGGACATATCTTTGCGGTGACACCGGGGCGACCTCCGGAAGCTGCAACCATTCTGGCGTTTCTGGTGATGGGG
ACGCTGATTGGCTCGCGCTTTGTGGGACAGAGGCTTGCAGATTTGAAGGTCGATTTTGCCGCGGGGCTTTGGGTGACGGG
CATCAATGTCACGGTCACGCTGATCGCGATTGGTGTGGCCATGCAGGTCATGGGCCTGTCTCCGGCCCTGCTGATCGTGG
CGTTTGCCCCCGGCGGGGTAGAGGCCATGGCCGCCATCGCGGTCACCCTCGGGCTTGATCCAGCCTTTGTGGCCGCCCAT
CACGTAATGCGGCTGATGATCCTGACCGTTCTGATGCCGCTGGCATTGCGCCGCGCGAAGGCGGGGTAA

Upstream 100 bases:

>100_bases
TGCCTGTCGCGTTCGGTGGGCATTCTGTCCCACGCATGGGAGCAGCAGCAACAGGGCGGGCGCAACAAGGGACCGACCCC
GCCCAAATACAGATGGACGT

Downstream 100 bases:

>100_bases
AAAATCCCCGGCGCAGCGGGCGCCGGGGATTGTGCAAAGAGGTTATTGAGCCTCCTGCGCCTCTTGTTCGATTTCAGCCC
CGAGGGTGGACACATCGCGG

Product: putative ammonia monooxygenase

Products: NA

Alternate protein names: Ammonia Monooxygenase Superfamily; Monooxygenase; AbrB Family Transcriptional Regulator; AbrB Protein; Ammonia Monooxygenase Superfamily Protein; Membrane-Associated Ammonia Monooxygenase

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTLTDVFGLVGALGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGLPIRMPVWLRTTAFVLLGINIGSSVTREMLASA
LAWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALAAAPGHLSYVLALSLSDGGQTSRIAVVQSIRVLFLTLCVPVL
VSLVFGATGVELMPEYVLSNWHLAALVGVTLVVGAVFDRLNIPAAYLLAGIFCSAAGHIFAVTPGRPPEAATILAFLVMG
TLIGSRFVGQRLADLKVDFAAGLWVTGINVTVTLIAIGVAMQVMGLSPALLIVAFAPGGVEAMAAIAVTLGLDPAFVAAH
HVMRLMILTVLMPLALRRAKAG

Sequences:

>Translated_342_residues
MTLTDVFGLVGALGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGLPIRMPVWLRTTAFVLLGINIGSSVTREMLASA
LAWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALAAAPGHLSYVLALSLSDGGQTSRIAVVQSIRVLFLTLCVPVL
VSLVFGATGVELMPEYVLSNWHLAALVGVTLVVGAVFDRLNIPAAYLLAGIFCSAAGHIFAVTPGRPPEAATILAFLVMG
TLIGSRFVGQRLADLKVDFAAGLWVTGINVTVTLIAIGVAMQVMGLSPALLIVAFAPGGVEAMAAIAVTLGLDPAFVAAH
HVMRLMILTVLMPLALRRAKAG
>Mature_341_residues
TLTDVFGLVGALGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGLPIRMPVWLRTTAFVLLGINIGSSVTREMLASAL
AWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALAAAPGHLSYVLALSLSDGGQTSRIAVVQSIRVLFLTLCVPVLV
SLVFGATGVELMPEYVLSNWHLAALVGVTLVVGAVFDRLNIPAAYLLAGIFCSAAGHIFAVTPGRPPEAATILAFLVMGT
LIGSRFVGQRLADLKVDFAAGLWVTGINVTVTLIAIGVAMQVMGLSPALLIVAFAPGGVEAMAAIAVTLGLDPAFVAAHH
VMRLMILTVLMPLALRRAKAG

Specific function: Unknown

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35471; Mature: 35340

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTDVFGLVGALGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGLPIRMPVWLRTTA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
FVLLGINIGSSVTREMLASALAWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALAA
HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC
APGHLSYVLALSLSDGGQTSRIAVVQSIRVLFLTLCVPVLVSLVFGATGVELMPEYVLSN
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
WHLAALVGVTLVVGAVFDRLNIPAAYLLAGIFCSAAGHIFAVTPGRPPEAATILAFLVMG
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
TLIGSRFVGQRLADLKVDFAAGLWVTGINVTVTLIAIGVAMQVMGLSPALLIVAFAPGGV
HHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
EAMAAIAVTLGLDPAFVAAHHVMRLMILTVLMPLALRRAKAG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLTDVFGLVGALGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGLPIRMPVWLRTTA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
FVLLGINIGSSVTREMLASALAWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALAA
HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC
APGHLSYVLALSLSDGGQTSRIAVVQSIRVLFLTLCVPVLVSLVFGATGVELMPEYVLSN
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
WHLAALVGVTLVVGAVFDRLNIPAAYLLAGIFCSAAGHIFAVTPGRPPEAATILAFLVMG
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
TLIGSRFVGQRLADLKVDFAAGLWVTGINVTVTLIAIGVAMQVMGLSPALLIVAFAPGGV
HHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
EAMAAIAVTLGLDPAFVAAHHVMRLMILTVLMPLALRRAKAG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA