| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yqeY [H]
Identifier: 99082133
GI number: 99082133
Start: 2412068
End: 2412541
Strand: Reverse
Name: yqeY [H]
Synonym: TM1040_2293
Alternate gene names: 99082133
Gene position: 2412541-2412068 (Counterclockwise)
Preceding gene: 99082136
Following gene: 99082130
Centisome position: 75.37
GC content: 59.7
Gene sequence:
>474_bases ATGGATACGCGAACTCGGGTCAACGAGGCCCTCAAACAGGCGATGAAGGACAAGGCGATGGAGCGTCTCTGCACTCTGCG CCTGATCAATGCTGCCATCAAGGACCGTGAAATCGCTGCGCGCGGTGACGGGGAAGAAGGCGGCATCGGCGATGAAGAGA TCCTCGCCATCCTCGGCAAGATGACCAAGCAGCGCAAGGAAAGCGTGCGCGCCTATGAGGAGGGCGGACGGCTCGACCTC GCCGAGCGCGAGATGAACGAGATTGAGATCATTGAGGAATTCCTGCCCAAACAGCTCTCTGAGGATGAGGTGTCGAACGC AGTGAAGGCCGCCGTTGATGAAACGGGTGCTGAATCCATCCGCGACATGGGCAAGGTCATGGGCGCGCTCAAGGCCAAAT ACACCGGCCAGATGGACTTTGGCAAAGTGGGCCCGATGGTCAAGGATCAGCTCTGCTCGGCAGGGGGCTGCTGA
Upstream 100 bases:
>100_bases CGATACCGGCCCTGCGTCTCGCACAATTGGGGGAGCTTGAATATTGCGGTGGATTTGAATAATACTGCCTCTTCTTGCTC CACCTGGACGAAGAGAAAAC
Downstream 100 bases:
>100_bases GGCCTTCGATTGCCATAACTGGCGTGGACATCGCGACGACAGATGAACCCCGGCTCTGACCCCAGAGCCGGGTTTTTTGT ACCTGTGGCTTCGATGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGKMTKQRKESVRAYEEGGRLDL AEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESIRDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC
Sequences:
>Translated_157_residues MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGKMTKQRKESVRAYEEGGRLDL AEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESIRDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC >Mature_157_residues MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGKMTKQRKESVRAYEEGGRLDL AEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESIRDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 17227; Mature: 17227
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH MTKQRKESVRAYEEGGRLDLAEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC HHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHCCCC >Mature Secondary Structure MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH MTKQRKESVRAYEEGGRLDLAEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC HHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]