Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is trpG [H]

Identifier: 99080982

GI number: 99080982

Start: 1227024

End: 1227605

Strand: Reverse

Name: trpG [H]

Synonym: TM1040_1141

Alternate gene names: 99080982

Gene position: 1227605-1227024 (Counterclockwise)

Preceding gene: 99080984

Following gene: 99080981

Centisome position: 38.35

GC content: 59.62

Gene sequence:

>582_bases
ATGTTGCTGCTTATCGACAACTACGACTCCTTCACCTACAACCTCGTGCATTATCTGGGCGAATTGGGCGCCGAGATCGA
GGTCTGGCGAAACGATGCGTTGGACGTGCAGCAAGCCATGGCGATGAAGCCTGCGGGCATCCTGTTGAGCCCTGGCCCCT
GTGACCCGGATCAGGCCGGGATCTGCCTTGCATTGACAGAGGCCGCCGCCGAAACCCGCACGCCGCTTTTGGGAGTCTGC
CTTGGTCATCAGACCATCGGCCAGTCTTTTGGCGGCAAGGTCGTGCGCTGCCATGAGATCGTGCATGGCAAGATGGGCAA
AATGCACCACACCGACAAAGGTCTCTTCAAGGGTCTGCCGTCGCCCTTTGATGCCACCCGCTATCACTCACTGGTGGTGG
AGCGCGAGAGCCTGCCCGACTGCCTGGAGATCACCGCAGAGCTGGAGGATGGCACCATCATGGGGCTGCAGCACAAGGAG
CTGCCCATCCACGGCGTGCAGTTCCACCCGGAATCCATTGCCTCCGAGCATGGGCATGCGCTGCTGCAAAACTTCCTGAA
TGAAATGAAAGTGCCGGCATGA

Upstream 100 bases:

>100_bases
ATGTGCCCTTGACGCTGCCGCGCATCCCTGAACATGTATGGTCCCACACACTATACTGCGGCGCGCACCCCGCCCGCCAC
CCTTAAAAGAGCGTCCCAAG

Downstream 100 bases:

>100_bases
GTGATGCGTTGAAACCCCTGATCGGTCTGGCCGCGGATCGCGCCCTGACCCGAACCGAAGCCGAAACCGCCTTTGCCGCG
CTGTTCAATGGCGAAGCCAC

Product: anthranilate synthase component II

Products: NA

Alternate protein names: Anthranilate synthase component II; Glutamine amido-transferase [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAGICLALTEAAAETRTPLLGVC
LGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLPSPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKE
LPIHGVQFHPESIASEHGHALLQNFLNEMKVPA

Sequences:

>Translated_193_residues
MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAGICLALTEAAAETRTPLLGVC
LGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLPSPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKE
LPIHGVQFHPESIASEHGHALLQNFLNEMKVPA
>Mature_193_residues
MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAGICLALTEAAAETRTPLLGVC
LGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLPSPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKE
LPIHGVQFHPESIASEHGHALLQNFLNEMKVPA

Specific function: Participates in the tryptophan-dependent indole-3-acetic acid production, which is a phytohormone released by A.brasilense [H]

COG id: COG0512

COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Homo sapiens, GI18105007, Length=184, Percent_Identity=32.6086956521739, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=55.8510638297872, Blast_Score=218, Evalue=2e-58,
Organism=Escherichia coli, GI1787517, Length=188, Percent_Identity=37.7659574468085, Blast_Score=126, Evalue=9e-31,
Organism=Escherichia coli, GI1786215, Length=155, Percent_Identity=29.0322580645161, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788854, Length=194, Percent_Identity=26.2886597938144, Blast_Score=65, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322638, Length=190, Percent_Identity=45.2631578947368, Blast_Score=178, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6324361, Length=208, Percent_Identity=35.5769230769231, Blast_Score=95, Evalue=9e-21,
Organism=Saccharomyces cerevisiae, GI6323873, Length=147, Percent_Identity=30.6122448979592, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006220
- InterPro:   IPR001317
- InterPro:   IPR011702
- InterPro:   IPR017926
- InterPro:   IPR000991
- InterPro:   IPR006221 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: =4.1.3.27 [H]

Molecular weight: Translated: 21129; Mature: 21129

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAG
CEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCCCC
ICLALTEAAAETRTPLLGVCLGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLP
EEEEEEHHHHHHCCCEEEEECCHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCHHHCCCC
SPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKELPIHGVQFHPESIASEHGHA
CCCCHHHHHHHEEECCCCCHHHHHHEECCCCEEECCCCCCCCCCCEEECHHHHHHHHHHH
LLQNFLNEMKVPA
HHHHHHHHHCCCC
>Mature Secondary Structure
MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAG
CEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCCCC
ICLALTEAAAETRTPLLGVCLGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLP
EEEEEEHHHHHHCCCEEEEECCHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCHHHCCCC
SPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKELPIHGVQFHPESIASEHGHA
CCCCHHHHHHHEEECCCCCHHHHHHEECCCCEEECCCCCCCCCCCEEECHHHHHHHHHHH
LLQNFLNEMKVPA
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1896020 [H]