| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99080593
Identifier: 99080593
GI number: 99080593
Start: 808785
End: 809177
Strand: Direct
Name: 99080593
Synonym: TM1040_0752
Alternate gene names: NA
Gene position: 808785-809177 (Clockwise)
Preceding gene: 99080592
Following gene: 99080594
Centisome position: 25.27
GC content: 59.03
Gene sequence:
>393_bases GTGATCCGCACGGCGCTCATATCGCTTTTGGGGCTCAACCTCATCGCCTGCACGGATGTCACGGGTGATGAGGTAAGCCG TGCCGCGCCCGACTATCTGGGCGTGAATACCAGTCTCCTCGATGGGGATCTGGTCCAGTTCCATGTGACCATGGACCGGG TTGGGGCGCTTGAGGATCTTAATGACTATGCCGACTGCGCAGCAGCACAATATGCGCTGATCCGCGGCTATGGCTTCGCG CGTCATGTGCGCACAAAAACGAAACAAGAGGCTGGTATTTGGGAGGCCGATGCGGTCTACACCATCTCGCCCGCCTTACC GCGCGGTTTGCGCACCCTCGACGCAGAAGTCGTGGTGCAGGACTGCAAGGCAAACGGAATACCTACGGTGTGA
Upstream 100 bases:
>100_bases ACGACTTTTACCTGACCAACCCGATTGCACGCGCATCGCAGCTGATGGCGGAGCTCTCCGCTCAGGCCAAGGCGCGCCGC GAAACGGCGCTGGCGGCAGA
Downstream 100 bases:
>100_bases GGACCCATGGCTGAATTCTTTAACACCCCAGGCGGCATTGCTGTCATCATCCTGGCGCAGACCCTGGCGGTTGTCGCCTT TGTGATGATCTCGCTTCTGT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MIRTALISLLGLNLIACTDVTGDEVSRAAPDYLGVNTSLLDGDLVQFHVTMDRVGALEDLNDYADCAAAQYALIRGYGFA RHVRTKTKQEAGIWEADAVYTISPALPRGLRTLDAEVVVQDCKANGIPTV
Sequences:
>Translated_130_residues MIRTALISLLGLNLIACTDVTGDEVSRAAPDYLGVNTSLLDGDLVQFHVTMDRVGALEDLNDYADCAAAQYALIRGYGFA RHVRTKTKQEAGIWEADAVYTISPALPRGLRTLDAEVVVQDCKANGIPTV >Mature_130_residues MIRTALISLLGLNLIACTDVTGDEVSRAAPDYLGVNTSLLDGDLVQFHVTMDRVGALEDLNDYADCAAAQYALIRGYGFA RHVRTKTKQEAGIWEADAVYTISPALPRGLRTLDAEVVVQDCKANGIPTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13996; Mature: 13996
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTALISLLGLNLIACTDVTGDEVSRAAPDYLGVNTSLLDGDLVQFHVTMDRVGALEDL CHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCCCCCCEECCCCEEEEEEEHHHHCCHHHH NDYADCAAAQYALIRGYGFARHVRTKTKQEAGIWEADAVYTISPALPRGLRTLDAEVVVQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHH DCKANGIPTV HHCCCCCCCC >Mature Secondary Structure MIRTALISLLGLNLIACTDVTGDEVSRAAPDYLGVNTSLLDGDLVQFHVTMDRVGALEDL CHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCCCCCCEECCCCEEEEEEEHHHHCCHHHH NDYADCAAAQYALIRGYGFARHVRTKTKQEAGIWEADAVYTISPALPRGLRTLDAEVVVQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHH DCKANGIPTV HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA