Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yqeB [C]

Identifier: 99080338

GI number: 99080338

Start: 520423

End: 521358

Strand: Reverse

Name: yqeB [C]

Synonym: TM1040_0497

Alternate gene names: 99080338

Gene position: 521358-520423 (Counterclockwise)

Preceding gene: 99080339

Following gene: 99080337

Centisome position: 16.29

GC content: 63.35

Gene sequence:

>936_bases
ATGGGGTTTGACGTCGAAGCGCTGAAGGCGGCCTTAGAGGCCCATGGTCGGGTGATCCGCGTGGTGGTGGCCGAGGTCAA
AGGCTCTGCGCCGCGTGAAGTCGGTGCAGCCATGCTGGTTTGGGACGGCGGGCAATCTGGCACCATTGGCGGTGGGACGC
TGGAATTTGAAGCCGCAGACGCCGCAAGACGTCAGGATGCGCCATACCGGCTTTCGACGCATGCATTGGGCCCAGATCTG
GGGCAATGCTGCGGGGGCGCTGTCACCCTGTTGAGCGAAGTCTACACCGAAGTGAACATCGCGCAGCTCACAGGCCAAGT
GATCTCACGGGCGGTGGCTCCCGGACCGGAGCCTTTGGCGGTAAGCCGGATTCTGAACCATGCCCGCGCGCAAGGGCTTG
CGCCAGCGCCACAATTGATTGCTGGCTGGATGATCGAACCGGTCGCCTGCGCGACGCGACCCTTGTGGATCTGGGGCGCC
GGCCATGTGGGGCGTGCGCTTGTTGAGGTGCTGGCACCTCTGCCGGATTACGCGATCACCTGGGTCGATGTGATGCGGTC
AAAGTACCCGCAGGAGATCCCCGCATCCGTCACGGCCCTACCCGCGCAGGAGCCGGGCCGTCTGGTGCCACATGCGCCCA
CGGAAGCCTATCATCTGATCCTGACCTATTCCCATCAGCTGGATCTGGCGCTATGCCACCGGCTGTTGGAGCATGGGTTT
GATTTTGCAGGTCTGATCGGATCCAAGACCAAATGGGCCCGGTTTCGCGCGCGCCTTGCAGCGCTGGGCCATCGCCCGGA
GCAGATCGCGCGCCTTACCTGCCCGATCGGCATGCCCGAACTGGGCAAACATCCACATGCCATCGCCATCGGCGTGGCGG
CAGAACTCATGGCGCTCTCGCAGCGTTTGGACTTGAAAAAGGAGCATAGCGCGTGA

Upstream 100 bases:

>100_bases
GCGCTCTCGGATGCGGTGTCTCGTTTCGGCGAAGGGCATCCACATTTGAACGCGCCTGCGACGGCGGAAGAGATCTGGCG
GGCAACAGAGACACTACGCC

Downstream 100 bases:

>100_bases
GCACGCCTCCCCTTCTGACCCTTGACGGCCTCACCAAGGCCTATCCCGGCGTCGTCGCCAATGACCAGGTCTCCTTCACC
ATCGGCACAGGCGAGGTGCA

Product: molybdenum cofactor sulfurylase

Products: NA

Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Xanthine Dehydrogenase Accessory Factor; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; XdhC Protein; Xanthine Dehydrogenase Xdh C Protein; Xanthine Dehydrogenase; Xanthine And CO Dehydrogenases Maturation Factor; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Xanthine Dehydrogenase Accessory Protein Xdhc; Dehydrogenase; Chaperone XdhC; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MGFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAADAARRQDAPYRLSTHALGPDL
GQCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLAVSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGA
GHVGRALVEVLAPLPDYAITWVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGF
DFAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALSQRLDLKKEHSA

Sequences:

>Translated_311_residues
MGFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAADAARRQDAPYRLSTHALGPDL
GQCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLAVSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGA
GHVGRALVEVLAPLPDYAITWVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGF
DFAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALSQRLDLKKEHSA
>Mature_310_residues
GFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAADAARRQDAPYRLSTHALGPDLG
QCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLAVSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGAG
HVGRALVEVLAPLPDYAITWVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGFD
FAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALSQRLDLKKEHSA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=291, Percent_Identity=26.1168384879725, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33182; Mature: 33051

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAAD
CCCCHHHHHHHHHHCCCEEEEEEEHHCCCCCHHHCCEEEEEECCCCCCCCCCEEEEECHH
AARRQDAPYRLSTHALGPDLGQCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLA
HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGAGHVGRALVEVLAPLPDYAIT
HHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCEEEEECCHHHHHHHHHHHCCCCHHHH
WVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGF
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC
DFAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALS
CEEHHCCCCHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCEEHHHHHHHHHHHH
QRLDLKKEHSA
HHHCCHHHCCC
>Mature Secondary Structure 
GFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAAD
CCCHHHHHHHHHHCCCEEEEEEEHHCCCCCHHHCCEEEEEECCCCCCCCCCEEEEECHH
AARRQDAPYRLSTHALGPDLGQCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLA
HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGAGHVGRALVEVLAPLPDYAIT
HHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCEEEEECCHHHHHHHHHHHCCCCHHHH
WVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGF
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC
DFAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALS
CEEHHCCCCHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCEEHHHHHHHHHHHH
QRLDLKKEHSA
HHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA