| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080300
Identifier: 99080300
GI number: 99080300
Start: 476638
End: 477012
Strand: Direct
Name: 99080300
Synonym: TM1040_0459
Alternate gene names: NA
Gene position: 476638-477012 (Clockwise)
Preceding gene: 99080299
Following gene: 99080301
Centisome position: 14.89
GC content: 62.4
Gene sequence:
>375_bases ATGACGCAGCCGGCGGGTGACATTCTGGTGCTTGAAGATGACATCACGCTTGGACAGCTCTTGTGCAATATGATCCGGAT GTATCGGCTTGGGGATCCGTACCTTTCCCTGAGCGAAGTGGATGCCTGCCAGATGCTCCGGGAGCGGGACTTCAAGCTGT GCTTTCTGGGGCTGCGGCTGCGTTCGGGGGTGTGCAAGCGCGCAGTGGCTGAGGCGGATGCGCGGATGGTTCCAACCCTG CTGATGGTCGACTCCGAAGGGCTGGAGGAACTCGTGCCGCCGCCACGCCGCGGGTTGGTCCTCCAGATGCCAGCCCGTGA GGAAGTGATCCGCGCCGCTGCGGTCACGCTTTTGGAGCAAAACGCAGCCGACTGA
Upstream 100 bases:
>100_bases GCGGATTGTGCTCAATTCCATTGGAGGTGTCATATATGTGTTGTTGTGGGGAGAGCTTGCCAAGCGCGACACCCTTTGGG TTTGCAAAGGACTGCACGAG
Downstream 100 bases:
>100_bases GCGCGCGCCGGTATAAATTTTTGAACTTTAAGTGATTTTCACCGGTGCCGGTCCGTGCTAGCGTAATTCTGCGCGGCTGT CAGAGTTCCTTCCACGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRLRSGVCKRAVAEADARMVPTL LMVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQNAAD
Sequences:
>Translated_124_residues MTQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRLRSGVCKRAVAEADARMVPTL LMVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQNAAD >Mature_123_residues TQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRLRSGVCKRAVAEADARMVPTLL MVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQNAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13801; Mature: 13670
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRL CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH RSGVCKRAVAEADARMVPTLLMVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQ HHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHH NAAD CCCC >Mature Secondary Structure TQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRL CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH RSGVCKRAVAEADARMVPTLLMVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQ HHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHH NAAD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA