BacMap

Definition	Cupriavidus metallidurans CH34 chromosome, complete genome.
Accession	NC_007973
Length	3,928,089

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The map label for this gene is ywqA [H]

Identifier: 94309439

GI number: 94309439

Start: 520891

End: 523968

Strand: Direct

Name: ywqA [H]

Synonym: Rmet_0494

Alternate gene names: 94309439

Gene position: 520891-523968 (Clockwise)

Preceding gene: 94309432

Following gene: 94309440

Centisome position: 13.26

GC content: 70.05

Gene sequence:

>3078_bases
ATGGTCGTCTCCCTCTGCAGCCCAGGTAAATGTCGCAAAGGCACCATTGTAAGCCGCGCGTCCTTGCGTGCCAACGAAGG
GCGGCGGATAGAGCGTTCTACAATCGCACCTTCCGACCTTCCACCGTTCCGCAGCCGCGTGTCCCAACCCGAACTCCCCG
TCGAGCGTGCCGATCATGATGCCGATTCCGTCGCGGATGGCGGCTGGCAGGCCACGCTTTGCGCACTTGAGGCATTGGCG
GGGGGCGTGGATGAAGCCGCCGGCACCGGCGACGGACGCCGCCTGCTCTGGGCGCTGACCCTCGATGCAGACGGTGTGGT
CGGGACGATCGAGCCGCTGGAGCAGACTCACGGGGCGCGTGGCTGGAGCAAGCCCAGGCCGGTGCCGCTGGCCCGTGTGG
CCGAGGACGACACCCTGCCACAGTGGGATGTCCGCGTCGCCCGTGCCATCCGCCGGGACGCATCGCGCAACCGGCGTCAC
GTGCTGGACCGCGCCGCCGCCGTGGTGGCGCTGGTGGGGCATCCGGCCGTGGTGCTGTCCCATGCGCCGACGGTGCCGAT
GGAAGTGGTCGAGTCCGCGCCTTCGCTCGAGGCGGTGCGCGAGGGCGACCGCTACGTGCTGCGGATCGTGCCGCCACTGC
GCGAGGCGCTGGCCATGGAGGACTTCCTGCCCGCCGCCGCGCGTCAGGAAGCCGAGTCGCTACGCCAGATCACCGTGCTG
CAGGATGGTCCGCGCCGGCTGCGCGTGGTCCGCTTCACGCCGGCGCAGCAGGGCGCGGCCAAGCTCATCGCGGGCGGACT
CTCCGTGCCGGCCGATGCCCAGGCGCGGCTCGACAGCACGTTGCGCGCGCTGGCGGGCCACTTCCAGATTCACGCCGACA
GCTCGGGCGAGGCACGCGAGCGCGACCCGGAGTCGCGGCTGCGTGCCGAGGTGGCGCCGGTTGGGCGCGGCATCAGCCTG
CGGCTGGTGGTGACGCCGCTTGGCGTGCTCGGGCCCAGGCTCGCGCCGGGCCACGGCCGCGCGCAACTGATGGCGACGAT
TGGCGGCGAGACGCACGTGACGTACCGCGATCTCGATGCCGAGCACGCGCACGTGGCCGAGGTATTCGAGGCGTTGCCGT
TCCTCGTGCAGCAGGCCCCCGCAGGCGGCGAGCACACCTGGACGCTGGACGATCCCGAGGACGCGCTGACCGCCATCGAG
GTGTTGCCCGGACTGGCCGGCGTGATCGATCTCGAATGGCCGCGTGGCCGTGAGTTGCGCGTCTTGCCGGCTGATATCGC
GCAGCTTGCCGTCAGCGTGGAGACCGGCAGCGAATGGTTCAAGCTCGTGGGCGAACTGCGCGTGGCCGAGGGGCTGGTGA
TCTCGCTCGAAAAACTGGTCGCGTGGGCGCACGGCCATGCGGGCCGCTTCATGCCGATGGCGCACGGCGTCTACGTGGCG
CTGACCCGCCAGTTGCGAGACCGGCTGCGCGATCTGGCCGGCGTGGGCGATGGCGTCCGGGACGGCATCCGTGTGCCGCT
GGTGGCCGCGCCCTGGCTCGACGACGTGCTGGCTGGCGCCGGTATCGACCCCGACGCGCACTTCCGCACCCGCGTGAAGC
AACTGCGTGCCGCGCGTGGTCACGATGCGCCGGTGCCGCCGACGCTGGTGGCGGAGTTGCGGCCGTATCAGCTCGAAGGC
TTCCGCTGGATGATGTCGCTGGCAGAAGCCGGCTTTGGCGCATGCCTGGCCGATGACATGGGCCTGGGCAAGACGCTGCA
GTCGCTGGCCGTGCTGCTGGCGCGGGCGGCGGGTGGCCCGGCCCTGGTTGTCGCGCCAACCTCGGTCTGCGGCAACTGGG
CCACAGAGGCGCGTCGCTTCGCCCCGGCGTTGCGGGTCCACGTCTATGCCGATGGCGACCGCGAGGCGATCGTCGGGCAG
GCCGCCGCGCACGATCTGGTGATCGTCTCGTACAACCTGCTGCAACAGGCCCGCAAGGCTTTCTGCGACCGTCACTGGCA
TACGGTCGTGGCTGACGAGGCGCAGTCGTTCAAGAATCCGTCTTCGCGCCGCGCACAGGCGATGTTCGCGCTGCCGGCCG
ATTGCCGCATCGCGCTTTCCGGTACACCAGTCGAAAACCGTCTTGCCGAACTCTGGGCCGTGATGCGTTTCTGCGTGCCG
GGGTTGCTTGGCTCGCTGGCACGCTTCAACGAGCATTTCGCGAATCCGATCGAACGCAGCGGCGCACGCGATCCGCGTCA
GCGGCTCCGGCGCATGATTGCCCCGTTCGTGTTGCGCCGGACCAAGGCGCAGGTCCTCGACGAATTGCCGCCGCGCACGG
AACTGGTGATTCGCGTCACGCCCGAGCCCACGGAAGCCGCCCACTACGAGGCGCTGCGCCGGCAGGCGCTTTCCGAGGCG
GAACGGGCGCTGCTGCGTCCGCGCAAGGACAAGAAGGCGCCCGCTGCCATGACCGAGCCCGAGGCGCGCATCCATGTGCT
TGCCCAGTTGATGCGGATGCGCCGTGCCGCGTGCGATCCGCGACTGGTCACGCCCGATGTAGGGCAGCCCGGCGCCAAGG
TGCGGGCATTCGCCGAACTGGCGGCCACGCTGGCCGCCAACGGGCATAAGACGCTGGTCTTCAGCCAGTTCGTCGATTTC
CTGCAGATGCTGCGGCAGGCGCTCGTTGACGCGGGTCTGGCGTGGCAGTACCTCGACGGCGCGACACCGGCCGGCGAGCG
CACGCGACGCGTGGCGGCATTTCAGGCGGGCGAGGGCGATGTGTTCCTGATCAGCCTGAAGGCAGGCGGGTTCGGCCTGA
ACCTGACCGCCGCCGACTACATCGTGATTGCCGATCCCTGGTGGAACCCGGCTGCCGAGGATCAGGCGATGGGCCGCGCG
CACCGCATCGGCCAGCAGCGGCCGGTCACGGTCTACCGGCTGATCGCGGCCGGCACGATCGAGGAGCGCATCGTCGATCT
GCACCAGGGCAAGCGGGCGCTGGCGGACGGCGTGCTCGACGCGATGGATGGCGAGGCGATCGGCCGCGATGTGCCGTTGC
CCGATGTCGATGAACTGGTAGGGCTGCTGCGGCGATGA

Upstream 100 bases:

>100_bases
GCCGTAATGCAGCGTGTGCGTGAGTACGTGAATCTTTGCGTCACGCCACTCAATCAGCTTGCCATCCATCCAGATCTTGC
CGTCGCGATCTGCCATCGAC

Downstream 100 bases:

>100_bases
GCGATACGCCGCTCAGGCACCAAACGGTATACAAAACGGCTCCCATGCATGGTGCATCGCACCATCAATCCGCCACCTGA
TTTCCCCTCATTTCCCTTTT

Product: Superfamily II DNA/RNA helicase, SNF2 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1025; Mature: 1025

Protein sequence:

>1025_residues
MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHDADSVADGGWQATLCALEALA
GGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGARGWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRH
VLDRAAAVVALVGHPAVVLSHAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL
QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARERDPESRLRAEVAPVGRGISL
RLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDAEHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIE
VLPGLAGVIDLEWPRGRELRVLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA
LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARGHDAPVPPTLVAELRPYQLEG
FRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGPALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQ
AAAHDLVIVSYNLLQQARKAFCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP
GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVTPEPTEAAHYEALRRQALSEA
ERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDPRLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDF
LQMLRQALVDAGLAWQYLDGATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA
HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELVGLLRR

Sequences:

>Translated_1025_residues
MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHDADSVADGGWQATLCALEALA
GGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGARGWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRH
VLDRAAAVVALVGHPAVVLSHAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL
QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARERDPESRLRAEVAPVGRGISL
RLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDAEHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIE
VLPGLAGVIDLEWPRGRELRVLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA
LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARGHDAPVPPTLVAELRPYQLEG
FRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGPALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQ
AAAHDLVIVSYNLLQQARKAFCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP
GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVTPEPTEAAHYEALRRQALSEA
ERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDPRLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDF
LQMLRQALVDAGLAWQYLDGATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA
HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELVGLLRR
>Mature_1025_residues
MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHDADSVADGGWQATLCALEALA
GGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGARGWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRH
VLDRAAAVVALVGHPAVVLSHAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL
QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARERDPESRLRAEVAPVGRGISL
RLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDAEHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIE
VLPGLAGVIDLEWPRGRELRVLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA
LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARGHDAPVPPTLVAELRPYQLEG
FRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGPALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQ
AAAHDLVIVSYNLLQQARKAFCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP
GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVTPEPTEAAHYEALRRQALSEA
ERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDPRLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDF
LQMLRQALVDAGLAWQYLDGATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA
HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELVGLLRR

Specific function: Transcription Regulator That Activates Transcription By Stimulating RNA Polymerase (Rnap) Recycling In Case Of Stress Conditions Such As Supercoiled DNA Or High Salt Concentrations. Probably Acts By Releasing The Rnap, When It Is Trapped Or Immobilized On

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI164419749, Length=469, Percent_Identity=33.6886993603412, Blast_Score=260, Evalue=4e-69,
Organism=Homo sapiens, GI21071044, Length=483, Percent_Identity=32.9192546583851, Blast_Score=253, Evalue=1e-66,
Organism=Homo sapiens, GI21071058, Length=499, Percent_Identity=31.8637274549098, Blast_Score=246, Evalue=6e-65,
Organism=Homo sapiens, GI21914927, Length=525, Percent_Identity=29.3333333333333, Blast_Score=244, Evalue=3e-64,
Organism=Homo sapiens, GI27477070, Length=557, Percent_Identity=30.7001795332136, Blast_Score=239, Evalue=7e-63,
Organism=Homo sapiens, GI148612870, Length=487, Percent_Identity=30.5954825462012, Blast_Score=226, Evalue=8e-59,
Organism=Homo sapiens, GI6912622, Length=515, Percent_Identity=28.5436893203883, Blast_Score=221, Evalue=3e-57,
Organism=Homo sapiens, GI24308089, Length=490, Percent_Identity=29.3877551020408, Blast_Score=217, Evalue=4e-56,
Organism=Homo sapiens, GI58219008, Length=533, Percent_Identity=29.6435272045028, Blast_Score=217, Evalue=5e-56,
Organism=Homo sapiens, GI118421089, Length=575, Percent_Identity=28.695652173913, Blast_Score=217, Evalue=6e-56,
Organism=Homo sapiens, GI192807320, Length=493, Percent_Identity=28.1947261663286, Blast_Score=216, Evalue=7e-56,
Organism=Homo sapiens, GI192807318, Length=493, Percent_Identity=28.1947261663286, Blast_Score=216, Evalue=8e-56,
Organism=Homo sapiens, GI192807314, Length=493, Percent_Identity=28.1947261663286, Blast_Score=216, Evalue=8e-56,
Organism=Homo sapiens, GI192807316, Length=493, Percent_Identity=28.1947261663286, Blast_Score=216, Evalue=8e-56,
Organism=Homo sapiens, GI192807312, Length=493, Percent_Identity=28.1947261663286, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI21071056, Length=493, Percent_Identity=28.1947261663286, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI192807323, Length=493, Percent_Identity=28.1947261663286, Blast_Score=215, Evalue=2e-55,
Organism=Homo sapiens, GI48255898, Length=493, Percent_Identity=27.789046653144, Blast_Score=213, Evalue=6e-55,
Organism=Homo sapiens, GI48255900, Length=493, Percent_Identity=27.789046653144, Blast_Score=213, Evalue=7e-55,
Organism=Homo sapiens, GI52630322, Length=524, Percent_Identity=28.4351145038168, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI52630326, Length=524, Percent_Identity=28.4351145038168, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI158420731, Length=524, Percent_Identity=28.4351145038168, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI190358536, Length=519, Percent_Identity=29.4797687861272, Blast_Score=209, Evalue=1e-53,
Organism=Homo sapiens, GI190358532, Length=519, Percent_Identity=29.4797687861272, Blast_Score=209, Evalue=1e-53,
Organism=Homo sapiens, GI51599156, Length=489, Percent_Identity=29.4478527607362, Blast_Score=208, Evalue=2e-53,
Organism=Homo sapiens, GI190358534, Length=512, Percent_Identity=27.734375, Blast_Score=208, Evalue=2e-53,
Organism=Homo sapiens, GI4557565, Length=507, Percent_Identity=30.3747534516765, Blast_Score=208, Evalue=2e-53,
Organism=Homo sapiens, GI68299795, Length=483, Percent_Identity=29.6066252587992, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI29244924, Length=518, Percent_Identity=28.5714285714286, Blast_Score=207, Evalue=4e-53,
Organism=Homo sapiens, GI114326455, Length=491, Percent_Identity=29.1242362525458, Blast_Score=206, Evalue=1e-52,
Organism=Homo sapiens, GI282165704, Length=491, Percent_Identity=29.1242362525458, Blast_Score=205, Evalue=2e-52,
Organism=Homo sapiens, GI58331268, Length=536, Percent_Identity=30.2238805970149, Blast_Score=203, Evalue=8e-52,
Organism=Homo sapiens, GI54112403, Length=509, Percent_Identity=29.0766208251473, Blast_Score=202, Evalue=2e-51,
Organism=Homo sapiens, GI95147342, Length=486, Percent_Identity=28.6008230452675, Blast_Score=200, Evalue=7e-51,
Organism=Homo sapiens, GI216548193, Length=532, Percent_Identity=27.4436090225564, Blast_Score=179, Evalue=1e-44,
Organism=Homo sapiens, GI216548186, Length=532, Percent_Identity=27.4436090225564, Blast_Score=179, Evalue=1e-44,
Organism=Homo sapiens, GI38708321, Length=277, Percent_Identity=37.1841155234657, Blast_Score=176, Evalue=1e-43,
Organism=Homo sapiens, GI40807471, Length=611, Percent_Identity=25.0409165302782, Blast_Score=173, Evalue=8e-43,
Organism=Homo sapiens, GI146219843, Length=320, Percent_Identity=33.125, Blast_Score=166, Evalue=9e-41,
Organism=Homo sapiens, GI62860046, Length=454, Percent_Identity=26.431718061674, Blast_Score=145, Evalue=2e-34,
Organism=Homo sapiens, GI187761314, Length=498, Percent_Identity=27.9116465863454, Blast_Score=138, Evalue=2e-32,
Organism=Homo sapiens, GI21071060, Length=498, Percent_Identity=27.9116465863454, Blast_Score=138, Evalue=2e-32,
Organism=Homo sapiens, GI56549696, Length=311, Percent_Identity=29.2604501607717, Blast_Score=117, Evalue=6e-26,
Organism=Homo sapiens, GI21071052, Length=133, Percent_Identity=41.3533834586466, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI21071054, Length=133, Percent_Identity=41.3533834586466, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI20336209, Length=180, Percent_Identity=32.7777777777778, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI20336205, Length=180, Percent_Identity=32.7777777777778, Blast_Score=96, Evalue=2e-19,
Organism=Homo sapiens, GI168823443, Length=157, Percent_Identity=33.1210191082803, Blast_Score=95, Evalue=3e-19,
Organism=Homo sapiens, GI289547541, Length=143, Percent_Identity=33.5664335664336, Blast_Score=82, Evalue=4e-15,
Organism=Homo sapiens, GI27436873, Length=143, Percent_Identity=33.5664335664336, Blast_Score=81, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25144179, Length=475, Percent_Identity=30.3157894736842, Blast_Score=240, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17539642, Length=478, Percent_Identity=29.7071129707113, Blast_Score=231, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17551114, Length=494, Percent_Identity=28.7449392712551, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI32563629, Length=483, Percent_Identity=31.2629399585921, Blast_Score=221, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71988744, Length=548, Percent_Identity=27.1897810218978, Blast_Score=218, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17569817, Length=527, Percent_Identity=27.8937381404175, Blast_Score=215, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI193204424, Length=507, Percent_Identity=30.1775147928994, Blast_Score=210, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17562600, Length=527, Percent_Identity=27.5142314990512, Blast_Score=203, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI193203140, Length=533, Percent_Identity=29.0806754221388, Blast_Score=199, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17508659, Length=539, Percent_Identity=27.2727272727273, Blast_Score=191, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI71995707, Length=499, Percent_Identity=27.6553106212425, Blast_Score=177, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI115534248, Length=320, Percent_Identity=31.875, Blast_Score=176, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI71991518, Length=480, Percent_Identity=26.6666666666667, Blast_Score=174, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI25148958, Length=454, Percent_Identity=27.0925110132159, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI25148960, Length=454, Percent_Identity=27.0925110132159, Blast_Score=140, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17552194, Length=454, Percent_Identity=27.0925110132159, Blast_Score=140, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17540630, Length=184, Percent_Identity=33.695652173913, Blast_Score=114, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI193203249, Length=184, Percent_Identity=32.6086956521739, Blast_Score=107, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17561718, Length=178, Percent_Identity=33.1460674157303, Blast_Score=95, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17538806, Length=169, Percent_Identity=33.1360946745562, Blast_Score=89, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI71980419, Length=181, Percent_Identity=29.8342541436464, Blast_Score=84, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324864, Length=477, Percent_Identity=29.769392033543, Blast_Score=238, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6324879, Length=466, Percent_Identity=30.4721030042918, Blast_Score=238, Evalue=5e-63,
Organism=Saccharomyces cerevisiae, GI6319722, Length=468, Percent_Identity=29.4871794871795, Blast_Score=236, Evalue=2e-62,
Organism=Saccharomyces cerevisiae, GI6325175, Length=533, Percent_Identity=28.1425891181989, Blast_Score=232, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6321153, Length=526, Percent_Identity=29.0874524714829, Blast_Score=229, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6321012, Length=513, Percent_Identity=30.2144249512671, Blast_Score=223, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6322065, Length=484, Percent_Identity=29.5454545454545, Blast_Score=221, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6322495, Length=555, Percent_Identity=28.2882882882883, Blast_Score=214, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6321275, Length=564, Percent_Identity=27.6595744680851, Blast_Score=194, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6319300, Length=527, Percent_Identity=28.6527514231499, Blast_Score=188, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6319547, Length=551, Percent_Identity=27.5862068965517, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6321289, Length=344, Percent_Identity=29.0697674418605, Blast_Score=163, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6320541, Length=359, Percent_Identity=29.2479108635098, Blast_Score=160, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6319590, Length=372, Percent_Identity=25.5376344086022, Blast_Score=121, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6323060, Length=153, Percent_Identity=37.2549019607843, Blast_Score=106, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6324765, Length=202, Percent_Identity=30.1980198019802, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281361889, Length=533, Percent_Identity=30.7692307692308, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24653134, Length=497, Percent_Identity=31.58953722334, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24653132, Length=497, Percent_Identity=31.58953722334, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI17737463, Length=497, Percent_Identity=31.58953722334, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24664914, Length=495, Percent_Identity=28.2828282828283, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI17985967, Length=495, Percent_Identity=28.2828282828283, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24664907, Length=495, Percent_Identity=28.2828282828283, Blast_Score=216, Evalue=6e-56,
Organism=Drosophila melanogaster, GI28574896, Length=495, Percent_Identity=28.2828282828283, Blast_Score=216, Evalue=6e-56,
Organism=Drosophila melanogaster, GI85724914, Length=519, Percent_Identity=30.8285163776493, Blast_Score=215, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24583161, Length=520, Percent_Identity=30.5769230769231, Blast_Score=214, Evalue=2e-55,
Organism=Drosophila melanogaster, GI17137266, Length=520, Percent_Identity=28.4615384615385, Blast_Score=203, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24666729, Length=528, Percent_Identity=26.3257575757576, Blast_Score=202, Evalue=8e-52,
Organism=Drosophila melanogaster, GI17136368, Length=527, Percent_Identity=27.7039848197343, Blast_Score=196, Evalue=5e-50,
Organism=Drosophila melanogaster, GI281366478, Length=492, Percent_Identity=26.4227642276423, Blast_Score=194, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24667055, Length=492, Percent_Identity=26.4227642276423, Blast_Score=194, Evalue=4e-49,
Organism=Drosophila melanogaster, GI62472261, Length=492, Percent_Identity=26.4227642276423, Blast_Score=194, Evalue=4e-49,
Organism=Drosophila melanogaster, GI221330583, Length=486, Percent_Identity=28.3950617283951, Blast_Score=183, Evalue=6e-46,
Organism=Drosophila melanogaster, GI17986031, Length=486, Percent_Identity=28.3950617283951, Blast_Score=183, Evalue=7e-46,
Organism=Drosophila melanogaster, GI28573600, Length=250, Percent_Identity=36.8, Blast_Score=167, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24648168, Length=275, Percent_Identity=34.5454545454545, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24656962, Length=249, Percent_Identity=36.5461847389558, Blast_Score=152, Evalue=8e-37,
Organism=Drosophila melanogaster, GI24656966, Length=249, Percent_Identity=36.5461847389558, Blast_Score=152, Evalue=8e-37,
Organism=Drosophila melanogaster, GI24581780, Length=472, Percent_Identity=27.1186440677966, Blast_Score=134, Evalue=4e-31,
Organism=Drosophila melanogaster, GI85724912, Length=370, Percent_Identity=28.3783783783784, Blast_Score=127, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24644932, Length=181, Percent_Identity=33.7016574585635, Blast_Score=108, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281361297, Length=161, Percent_Identity=39.1304347826087, Blast_Score=104, Evalue=4e-22,
Organism=Drosophila melanogaster, GI62484263, Length=151, Percent_Identity=34.4370860927152, Blast_Score=97, Evalue=7e-20,
Organism=Drosophila melanogaster, GI21356675, Length=180, Percent_Identity=32.7777777777778, Blast_Score=92, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24650076, Length=180, Percent_Identity=32.7777777777778, Blast_Score=92, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR022138
- InterPro:   IPR000330 [H]

Pfam domain/function: PF12419 DUF3670; PF00271 Helicase_C; PF00176 SNF2_N [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 111134; Mature: 111134

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHD
CEEECCCCCCCCCCCEEEHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCHHHCCCC
ADSVADGGWQATLCALEALAGGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGAR
HHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCEECCHHHHHHCCCC
GWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRHVLDRAAAVVALVGHPAVVLS
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
HAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL
CCCCCHHHHHHCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHEEHEE
QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARE
CCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCC
RDPESRLRAEVAPVGRGISLRLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDA
CCHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCCCEEEEEEECCCEEEEEECCCC
EHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIEVLPGLAGVIDLEWPRGRELR
CHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEE
VLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA
EEHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARG
HHHHHHHHHHHHHCCCCCHHCCCCCCEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCC
HDAPVPPTLVAELRPYQLEGFRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGP
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCC
ALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQAAAHDLVIVSYNLLQQARKA
EEEEECHHHHCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHH
FCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP
HHHCCCHHHHHHHHHHCCCCCHHHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHH
GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVT
HHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PEPTEAAHYEALRRQALSEAERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
RLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDFLQMLRQALVDAGLAWQYLDG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCC
ATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA
CCCCCHHHHEEHEEECCCCCEEEEEEECCCCEEEEEECCEEEEECCCCCCCCHHHHHHHH
HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELV
HHCCCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
GLLRR
HHHCC
>Mature Secondary Structure
MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHD
CEEECCCCCCCCCCCEEEHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCHHHCCCC
ADSVADGGWQATLCALEALAGGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGAR
HHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCEECCHHHHHHCCCC
GWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRHVLDRAAAVVALVGHPAVVLS
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
HAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL
CCCCCHHHHHHCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHEEHEE
QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARE
CCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCC
RDPESRLRAEVAPVGRGISLRLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDA
CCHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCCCEEEEEEECCCEEEEEECCCC
EHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIEVLPGLAGVIDLEWPRGRELR
CHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEE
VLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA
EEHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARG
HHHHHHHHHHHHHCCCCCHHCCCCCCEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCC
HDAPVPPTLVAELRPYQLEGFRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGP
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCC
ALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQAAAHDLVIVSYNLLQQARKA
EEEEECHHHHCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHH
FCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP
HHHCCCHHHHHHHHHHCCCCCHHHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHH
GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVT
HHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PEPTEAAHYEALRRQALSEAERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
RLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDFLQMLRQALVDAGLAWQYLDG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCC
ATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA
CCCCCHHHHEEHEEECCCCCEEEEEEECCCCEEEEEECCEEEEECCCCCCCCHHHHHHHH
HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELV
HHCCCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
GLLRR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9353933 [H]