| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is sbp [H]
Identifier: 93006216
GI number: 93006216
Start: 1699193
End: 1700290
Strand: Reverse
Name: sbp [H]
Synonym: Pcryo_1390
Alternate gene names: 93006216
Gene position: 1700290-1699193 (Counterclockwise)
Preceding gene: 93006217
Following gene: 93006215
Centisome position: 55.57
GC content: 44.35
Gene sequence:
>1098_bases ATGACATCATATACCGCAGGTTATAAAAATAAGACACTTAGCGCCCTAAGTATCGCCGGTGTGGCGCTCACTTTAGGTAT TGCAGGCTGTAGCAACAACGAAAAAACTGAGCCAGCTGCCAATGCAGAGGGCACGCCAGCAGCGACAGAAGGGCAGGACA TCGAAATATTGAACGTCTCCTACGATGTCGCCCGTGATTTTTATAAAGACTACAATCCATTATTTGTTGATCATTACAAA AGCGAGCACCCAAACAGCAATATTCTTATCAAGCAGTCGCATGGTGGTTCGAGTAAACAAGCCCTGTCGGTCGCGAATGG TTTACAAGCCGATGTCGCAACCATGAACCAAGGCTCTGATATTGAGCTGCTTGAGAAAAAAGGCTTGGTTGAGTCAGATT GGGAAAGCAAATTCCCAGACAATGCCGTACCTTTTACCAGTACCATCGTCTTTTTAGTGCGCAAAGACAATCCAAAAGGC ATCAATGATTGGGCAGATTTGACCAAAGAGGGTGTTGAGATTGTCATGGCAAACCCAAAAGTGACGGGTAACGGTCGCTA TGCCTTCTTAGGTGCTTATGGTTATGGTTTACATGCTTTTAATAAAGATGAAGCACAAGCAGAAAAATACGTCAAAGACA TGCTAAAAAACGTCAAAGTCTATGAAAGTGGCGGACGTGCGGCGACTACGACGTTTGTACAACGTGGTATCGGTGATGTC TTGGTAACATTTGAGAACGAAGCCAACCTTGCGGCAAAAGATTTTGGCGTCGGTCAAGTCGATATTGTTTATCCAAAATA CTCAATAAAATCTGAAAGCCCAGTTGCTATTGTAAAAACCGTCACTGATAAAAAAGGCACCACAGATGCCGCCAAAGCCT ATCTTGATTTCTTATGGAGCGATGCAGCCCAGCAATTGGCAGCTGACTTATACTTGCGCCCAAGTGTGAAGAGTGTTCTT GATAAAAACAGTGATAAATTGCCACCTATCGACACCTTCCGTCCGAATGACGCTTTTGGCACTTGGGATGAGATCATGAG CACCTATTTCAGTGATGGTGGTTTGTTTGATAAGTTAGCGGTTAATGCGCCTCAGTAA
Upstream 100 bases:
>100_bases TTCCATTTTGGCAATAACATACACATATTCATCATTAAACATAATAAGATAGCACTGTTAGCATACTTACATTACTTATC AGACATTTTTTGAGGCAGCC
Downstream 100 bases:
>100_bases CAACGGTAGTACTGTGAGTAACCGACGATAAAAGCCGTTACTTATTCAAGAATTTATTTGAGTACAGCGACTGCATTATT TGACTATTAATCAGTAACGC
Product: thiosulfate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MTSYTAGYKNKTLSALSIAGVALTLGIAGCSNNEKTEPAANAEGTPAATEGQDIEILNVSYDVARDFYKDYNPLFVDHYK SEHPNSNILIKQSHGGSSKQALSVANGLQADVATMNQGSDIELLEKKGLVESDWESKFPDNAVPFTSTIVFLVRKDNPKG INDWADLTKEGVEIVMANPKVTGNGRYAFLGAYGYGLHAFNKDEAQAEKYVKDMLKNVKVYESGGRAATTTFVQRGIGDV LVTFENEANLAAKDFGVGQVDIVYPKYSIKSESPVAIVKTVTDKKGTTDAAKAYLDFLWSDAAQQLAADLYLRPSVKSVL DKNSDKLPPIDTFRPNDAFGTWDEIMSTYFSDGGLFDKLAVNAPQ
Sequences:
>Translated_365_residues MTSYTAGYKNKTLSALSIAGVALTLGIAGCSNNEKTEPAANAEGTPAATEGQDIEILNVSYDVARDFYKDYNPLFVDHYK SEHPNSNILIKQSHGGSSKQALSVANGLQADVATMNQGSDIELLEKKGLVESDWESKFPDNAVPFTSTIVFLVRKDNPKG INDWADLTKEGVEIVMANPKVTGNGRYAFLGAYGYGLHAFNKDEAQAEKYVKDMLKNVKVYESGGRAATTTFVQRGIGDV LVTFENEANLAAKDFGVGQVDIVYPKYSIKSESPVAIVKTVTDKKGTTDAAKAYLDFLWSDAAQQLAADLYLRPSVKSVL DKNSDKLPPIDTFRPNDAFGTWDEIMSTYFSDGGLFDKLAVNAPQ >Mature_364_residues TSYTAGYKNKTLSALSIAGVALTLGIAGCSNNEKTEPAANAEGTPAATEGQDIEILNVSYDVARDFYKDYNPLFVDHYKS EHPNSNILIKQSHGGSSKQALSVANGLQADVATMNQGSDIELLEKKGLVESDWESKFPDNAVPFTSTIVFLVRKDNPKGI NDWADLTKEGVEIVMANPKVTGNGRYAFLGAYGYGLHAFNKDEAQAEKYVKDMLKNVKVYESGGRAATTTFVQRGIGDVL VTFENEANLAAKDFGVGQVDIVYPKYSIKSESPVAIVKTVTDKKGTTDAAKAYLDFLWSDAAQQLAADLYLRPSVKSVLD KNSDKLPPIDTFRPNDAFGTWDEIMSTYFSDGGLFDKLAVNAPQ
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=309, Percent_Identity=45.6310679611651, Blast_Score=300, Evalue=9e-83, Organism=Escherichia coli, GI1788765, Length=309, Percent_Identity=45.9546925566343, Blast_Score=292, Evalue=2e-80,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 39622; Mature: 39490
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSYTAGYKNKTLSALSIAGVALTLGIAGCSNNEKTEPAANAEGTPAATEGQDIEILNVS CCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECH YDVARDFYKDYNPLFVDHYKSEHPNSNILIKQSHGGSSKQALSVANGLQADVATMNQGSD HHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHCCCCCC IELLEKKGLVESDWESKFPDNAVPFTSTIVFLVRKDNPKGINDWADLTKEGVEIVMANPK CHHHHHCCCCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCEEEEECCE VTGNGRYAFLGAYGYGLHAFNKDEAQAEKYVKDMLKNVKVYESGGRAATTTFVQRGIGDV EECCCCEEEEEEECCCEECCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCCCEE LVTFENEANLAAKDFGVGQVDIVYPKYSIKSESPVAIVKTVTDKKGTTDAAKAYLDFLWS EEEEECCCCCEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH DAAQQLAADLYLRPSVKSVLDKNSDKLPPIDTFRPNDAFGTWDEIMSTYFSDGGLFDKLA HHHHHHHHHHEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHC VNAPQ CCCCC >Mature Secondary Structure TSYTAGYKNKTLSALSIAGVALTLGIAGCSNNEKTEPAANAEGTPAATEGQDIEILNVS CCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECH YDVARDFYKDYNPLFVDHYKSEHPNSNILIKQSHGGSSKQALSVANGLQADVATMNQGSD HHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHCCCCCC IELLEKKGLVESDWESKFPDNAVPFTSTIVFLVRKDNPKGINDWADLTKEGVEIVMANPK CHHHHHCCCCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCEEEEECCE VTGNGRYAFLGAYGYGLHAFNKDEAQAEKYVKDMLKNVKVYESGGRAATTTFVQRGIGDV EECCCCEEEEEEECCCEECCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCCCEE LVTFENEANLAAKDFGVGQVDIVYPKYSIKSESPVAIVKTVTDKKGTTDAAKAYLDFLWS EEEEECCCCCEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH DAAQQLAADLYLRPSVKSVLDKNSDKLPPIDTFRPNDAFGTWDEIMSTYFSDGGLFDKLA HHHHHHHHHHEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHC VNAPQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]