| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is merA [H]
Identifier: 93005805
GI number: 93005805
Start: 1163995
End: 1166163
Strand: Reverse
Name: merA [H]
Synonym: Pcryo_0977
Alternate gene names: 93005805
Gene position: 1166163-1163995 (Counterclockwise)
Preceding gene: 93005806
Following gene: 93005804
Centisome position: 38.11
GC content: 44.54
Gene sequence:
>2169_bases ATGATTAAAAAAATAGTTTTGATATTCGCGGTCTTGATTGGCGTCATTGGCTTTTTTTATTTTGACCTCAATGAATTATT AACACTTGAGGGCTTAAAAGGCTCGATGGATCAGTTTGAGCAATACAAAACACAGTCGCCATGGTTAGTCATCGGCGGCT TTTTTTTGGTCTACATCTTAGTTACCGCATTATCTTTACCCGGCGCCGCTATTTTAACTTTGGCAGCCGGTGCTTTATTT GGTTTAGTACAAGGTGTATTGGTCGCCTCATTTGCCTCCAGTATCGGTGCCACCCTCGCCTTTTTGACTTCGCGTTATTT GTTACGCGATACCATTAAACAGCGTTTTCCTGACCGTCTTGCTTCCATCGATGCTGGGGTAAAAAAAGAAGGCGGATTTT ATTTATTTACGTTACGTTTGGTACCGATATTCCCCTTTTTCCTTATCAACTTATTGATGGGTCTGACTGCTATCAAAGCA AGGACCTTTTATTGGGTCAGCCAAATCGGTATGCTTGCCGGCACTTTTGTATTTGTGAATGCTGGTACGCAATTGGCACA AATCGAGCAGTTATCTGGCATTTTGTCTTTTAATCTTCTGGCTTCATTTGCATTATTAGGATTATTTCCGCTAATAGCGA AAGGCATATTAACGATACTAAAAAAACGCCGTGTCTATAAGAACTATAATAAACCAAAAAAATTCGACCGGAATATGATT GTGATTGGTGCTGGTGCTGGCGGACTTGTTACCAGCTATATTGCTGCGACCGTCAAAGCAAAAGTCACCTTGATTGAGGC AGGTGAGATGGGCGGCGACTGCTTAAACTATGGCTGCGTCCCCAGTAAAGCGCTGATAAAAAGTGCAAAAGTAGTCGAAC AGATACGCCATGGCGAACGTTATGGACTCAATAATAGCCAACCGGATTTTGCATTCAAGAACATCATGTCTCGCATTCAT AAAGTCATTGCTGATATCGCCCCAAATGACAGTGTTGAGCGTTATACAGATTTGGGTGTCGAGGTATTGAAAGGCTATGC AAAGCTCATTGATCCATGGACGGTTGAGATTGCCCTCAATGATGGTAGCACTCAGACATTAACCGCGCGCTCTATCGTTA TCGCGACGGGCGCACGTCCCTTTGTCCCAGATCTACCGGGTTTAGATGAGACAGGTTATGTGACAAGCGATACTCTCTGG GATAAGTTTGCAAAACTTGATAAAGCGCCGAGCAAGCTGGTCGTACTTGGCGGCGGACCCATTGGCTGTGAGCTGGCACA AGCCTTTGCTCGTTTAGGTTCTGCTGTGACCCAAATCGAAAGAGGCACGCGACTGATGAAAAAAGAGGATGTCGAGGTTT CTGTATTTGCGCAAGAAGCACTGACTGAGAGTGGCGTTACTATCCTAACCTCACAGCAAGCAATTCGCTGTGAAACTCGT GATGGCAAAAAACATATTATCGTTGCACCAAAAGGCAGCACTGATGATCAACAAGAAACTGCCATTGAGTATGACGAGTT GATTTGTGCAGTCGGTCGTAGTGCGCGCTTAGAAGGTTACGGGCTTGACACCTTGGGCATCGATACTGAGCGTACCATCA GTACAGATGAGTATCTTGAAACGCTTTACCCCAATATCTATGCGGCAGGTGATGTCGTAGGTCCCTATCAATTCACCCAT GTGGCTGCCCATCAAGCATGGTACGCTGCGGTCAATGGCTTATTTGGTCATCTTAAAAAATTCAAAGTAGATTATCGGGT GATTCCATGGACGACGTTTATTGACCCAGAAGTAGCACGAGTGGGCTTAAATGAGCAAGAAGCGATTGATAAAGGCATCG ATTTTGAAATCACACGTTATGACTTTAAAGACTTAGATCGGGCGGTAACCGAAAGCGCCAATCATGGCTTTATCAAGGTC ATTACCCCAAAGGGCAAAGATAAAATATTGGGTGTGACCATCGTCGCTGAACATGCCGGCGACTTGATGGCTGAGTTTGT ATTGGCCATGAAACACAATCTAGGGCTGAATAAAATACTGGGTACCATTCATATCTATCCAACATGGGCGGAAGGCAATA AGTATGCAGCTGGCGAATGGAAACGCAATCATGCGCCTAAAAAAGCGCTACAGTTGCTTGAGAAGTATCATACTTGGCGT CGAGGTTAA
Upstream 100 bases:
>100_bases TAACTATATGAAAAACTAGCTTATAGTAGGAATACAGCGTTATTCTTTGCTAAGTGATTCTTTATTACATGATGTTTTAT ATTATTTATCTGGATAATCC
Downstream 100 bases:
>100_bases TTCATGCAACCTCCTAGCTTGCCAGCAGCCTTTACAATACCAAAAAAACTGAGCCGCTATAGCGCCTTTATCATAGTGCT TGGTATATGTGTTGGCATCT
Product: pyridine nucleotide-disulfide oxidoreductase dimerisation region
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MIKKIVLIFAVLIGVIGFFYFDLNELLTLEGLKGSMDQFEQYKTQSPWLVIGGFFLVYILVTALSLPGAAILTLAAGALF GLVQGVLVASFASSIGATLAFLTSRYLLRDTIKQRFPDRLASIDAGVKKEGGFYLFTLRLVPIFPFFLINLLMGLTAIKA RTFYWVSQIGMLAGTFVFVNAGTQLAQIEQLSGILSFNLLASFALLGLFPLIAKGILTILKKRRVYKNYNKPKKFDRNMI VIGAGAGGLVTSYIAATVKAKVTLIEAGEMGGDCLNYGCVPSKALIKSAKVVEQIRHGERYGLNNSQPDFAFKNIMSRIH KVIADIAPNDSVERYTDLGVEVLKGYAKLIDPWTVEIALNDGSTQTLTARSIVIATGARPFVPDLPGLDETGYVTSDTLW DKFAKLDKAPSKLVVLGGGPIGCELAQAFARLGSAVTQIERGTRLMKKEDVEVSVFAQEALTESGVTILTSQQAIRCETR DGKKHIIVAPKGSTDDQQETAIEYDELICAVGRSARLEGYGLDTLGIDTERTISTDEYLETLYPNIYAAGDVVGPYQFTH VAAHQAWYAAVNGLFGHLKKFKVDYRVIPWTTFIDPEVARVGLNEQEAIDKGIDFEITRYDFKDLDRAVTESANHGFIKV ITPKGKDKILGVTIVAEHAGDLMAEFVLAMKHNLGLNKILGTIHIYPTWAEGNKYAAGEWKRNHAPKKALQLLEKYHTWR RG
Sequences:
>Translated_722_residues MIKKIVLIFAVLIGVIGFFYFDLNELLTLEGLKGSMDQFEQYKTQSPWLVIGGFFLVYILVTALSLPGAAILTLAAGALF GLVQGVLVASFASSIGATLAFLTSRYLLRDTIKQRFPDRLASIDAGVKKEGGFYLFTLRLVPIFPFFLINLLMGLTAIKA RTFYWVSQIGMLAGTFVFVNAGTQLAQIEQLSGILSFNLLASFALLGLFPLIAKGILTILKKRRVYKNYNKPKKFDRNMI VIGAGAGGLVTSYIAATVKAKVTLIEAGEMGGDCLNYGCVPSKALIKSAKVVEQIRHGERYGLNNSQPDFAFKNIMSRIH KVIADIAPNDSVERYTDLGVEVLKGYAKLIDPWTVEIALNDGSTQTLTARSIVIATGARPFVPDLPGLDETGYVTSDTLW DKFAKLDKAPSKLVVLGGGPIGCELAQAFARLGSAVTQIERGTRLMKKEDVEVSVFAQEALTESGVTILTSQQAIRCETR DGKKHIIVAPKGSTDDQQETAIEYDELICAVGRSARLEGYGLDTLGIDTERTISTDEYLETLYPNIYAAGDVVGPYQFTH VAAHQAWYAAVNGLFGHLKKFKVDYRVIPWTTFIDPEVARVGLNEQEAIDKGIDFEITRYDFKDLDRAVTESANHGFIKV ITPKGKDKILGVTIVAEHAGDLMAEFVLAMKHNLGLNKILGTIHIYPTWAEGNKYAAGEWKRNHAPKKALQLLEKYHTWR RG >Mature_722_residues MIKKIVLIFAVLIGVIGFFYFDLNELLTLEGLKGSMDQFEQYKTQSPWLVIGGFFLVYILVTALSLPGAAILTLAAGALF GLVQGVLVASFASSIGATLAFLTSRYLLRDTIKQRFPDRLASIDAGVKKEGGFYLFTLRLVPIFPFFLINLLMGLTAIKA RTFYWVSQIGMLAGTFVFVNAGTQLAQIEQLSGILSFNLLASFALLGLFPLIAKGILTILKKRRVYKNYNKPKKFDRNMI VIGAGAGGLVTSYIAATVKAKVTLIEAGEMGGDCLNYGCVPSKALIKSAKVVEQIRHGERYGLNNSQPDFAFKNIMSRIH KVIADIAPNDSVERYTDLGVEVLKGYAKLIDPWTVEIALNDGSTQTLTARSIVIATGARPFVPDLPGLDETGYVTSDTLW DKFAKLDKAPSKLVVLGGGPIGCELAQAFARLGSAVTQIERGTRLMKKEDVEVSVFAQEALTESGVTILTSQQAIRCETR DGKKHIIVAPKGSTDDQQETAIEYDELICAVGRSARLEGYGLDTLGIDTERTISTDEYLETLYPNIYAAGDVVGPYQFTH VAAHQAWYAAVNGLFGHLKKFKVDYRVIPWTTFIDPEVARVGLNEQEAIDKGIDFEITRYDFKDLDRAVTESANHGFIKV ITPKGKDKILGVTIVAEHAGDLMAEFVLAMKHNLGLNKILGTIHIYPTWAEGNKYAAGEWKRNHAPKKALQLLEKYHTWR RG
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=502, Percent_Identity=30.2788844621514, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI50301238, Length=471, Percent_Identity=28.4501061571125, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI22035672, Length=432, Percent_Identity=26.8518518518519, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI148277065, Length=482, Percent_Identity=26.1410788381743, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI33519430, Length=482, Percent_Identity=26.1410788381743, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI33519428, Length=482, Percent_Identity=26.1410788381743, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI33519426, Length=482, Percent_Identity=26.1410788381743, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI148277071, Length=482, Percent_Identity=26.1410788381743, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI291045266, Length=434, Percent_Identity=25.8064516129032, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI291045268, Length=432, Percent_Identity=23.1481481481481, Blast_Score=76, Evalue=1e-13, Organism=Escherichia coli, GI1786307, Length=469, Percent_Identity=29.637526652452, Blast_Score=176, Evalue=4e-45, Organism=Escherichia coli, GI87082354, Length=476, Percent_Identity=27.9411764705882, Blast_Score=155, Evalue=9e-39, Organism=Escherichia coli, GI1789915, Length=454, Percent_Identity=29.295154185022, Blast_Score=148, Evalue=1e-36, Organism=Escherichia coli, GI87081717, Length=457, Percent_Identity=25.382932166302, Blast_Score=132, Evalue=6e-32, Organism=Escherichia coli, GI1789065, Length=182, Percent_Identity=33.5164835164835, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI87081964, Length=210, Percent_Identity=30.4761904761905, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32565766, Length=482, Percent_Identity=32.1576763485477, Blast_Score=213, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17557007, Length=498, Percent_Identity=29.3172690763052, Blast_Score=165, Evalue=8e-41, Organism=Caenorhabditis elegans, GI71982272, Length=443, Percent_Identity=26.1851015801354, Blast_Score=119, Evalue=5e-27, Organism=Caenorhabditis elegans, GI71983419, Length=444, Percent_Identity=26.3513513513513, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71983429, Length=444, Percent_Identity=26.3513513513513, Blast_Score=116, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17532687, Length=192, Percent_Identity=28.6458333333333, Blast_Score=86, Evalue=9e-17, Organism=Caenorhabditis elegans, GI115533785, Length=170, Percent_Identity=25.8823529411765, Blast_Score=66, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6325166, Length=473, Percent_Identity=29.5983086680761, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6321091, Length=508, Percent_Identity=27.755905511811, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6325240, Length=477, Percent_Identity=25.7861635220126, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI21358499, Length=471, Percent_Identity=31.2101910828025, Blast_Score=208, Evalue=1e-53, Organism=Drosophila melanogaster, GI24640553, Length=495, Percent_Identity=28.4848484848485, Blast_Score=158, Evalue=2e-38, Organism=Drosophila melanogaster, GI24640551, Length=492, Percent_Identity=28.6585365853659, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI24640549, Length=479, Percent_Identity=28.6012526096033, Blast_Score=156, Evalue=5e-38, Organism=Drosophila melanogaster, GI17737741, Length=478, Percent_Identity=27.4058577405858, Blast_Score=146, Evalue=4e-35,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 79337; Mature: 79337
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKIVLIFAVLIGVIGFFYFDLNELLTLEGLKGSMDQFEQYKTQSPWLVIGGFFLVYIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHH VTALSLPGAAILTLAAGALFGLVQGVLVASFASSIGATLAFLTSRYLLRDTIKQRFPDRL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ASIDAGVKKEGGFYLFTLRLVPIFPFFLINLLMGLTAIKARTFYWVSQIGMLAGTFVFVN HHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE AGTQLAQIEQLSGILSFNLLASFALLGLFPLIAKGILTILKKRRVYKNYNKPKKFDRNMI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEE VIGAGAGGLVTSYIAATVKAKVTLIEAGEMGGDCLNYGCVPSKALIKSAKVVEQIRHGER EEECCCCHHHHHHHHHHHHEEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCC YGLNNSQPDFAFKNIMSRIHKVIADIAPNDSVERYTDLGVEVLKGYAKLIDPWTVEIALN CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC DGSTQTLTARSIVIATGARPFVPDLPGLDETGYVTSDTLWDKFAKLDKAPSKLVVLGGGP CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC IGCELAQAFARLGSAVTQIERGTRLMKKEDVEVSVFAQEALTESGVTILTSQQAIRCETR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCEEEECCCCEEEECC DGKKHIIVAPKGSTDDQQETAIEYDELICAVGRSARLEGYGLDTLGIDTERTISTDEYLE CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHH TLYPNIYAAGDVVGPYQFTHVAAHQAWYAAVNGLFGHLKKFKVDYRVIPWTTFIDPEVAR HHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECEEEECCCHHHH VGLNEQEAIDKGIDFEITRYDFKDLDRAVTESANHGFIKVITPKGKDKILGVTIVAEHAG CCCCHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEHHHH DLMAEFVLAMKHNLGLNKILGTIHIYPTWAEGNKYAAGEWKRNHAPKKALQLLEKYHTWR HHHHHHHHHHHHCCCHHHHEEEEEEEEEECCCCCEECCCCHHCCCHHHHHHHHHHHHHHC RG CC >Mature Secondary Structure MIKKIVLIFAVLIGVIGFFYFDLNELLTLEGLKGSMDQFEQYKTQSPWLVIGGFFLVYIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHH VTALSLPGAAILTLAAGALFGLVQGVLVASFASSIGATLAFLTSRYLLRDTIKQRFPDRL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ASIDAGVKKEGGFYLFTLRLVPIFPFFLINLLMGLTAIKARTFYWVSQIGMLAGTFVFVN HHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE AGTQLAQIEQLSGILSFNLLASFALLGLFPLIAKGILTILKKRRVYKNYNKPKKFDRNMI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEE VIGAGAGGLVTSYIAATVKAKVTLIEAGEMGGDCLNYGCVPSKALIKSAKVVEQIRHGER EEECCCCHHHHHHHHHHHHEEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCC YGLNNSQPDFAFKNIMSRIHKVIADIAPNDSVERYTDLGVEVLKGYAKLIDPWTVEIALN CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC DGSTQTLTARSIVIATGARPFVPDLPGLDETGYVTSDTLWDKFAKLDKAPSKLVVLGGGP CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC IGCELAQAFARLGSAVTQIERGTRLMKKEDVEVSVFAQEALTESGVTILTSQQAIRCETR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCEEEECCCCEEEECC DGKKHIIVAPKGSTDDQQETAIEYDELICAVGRSARLEGYGLDTLGIDTERTISTDEYLE CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHH TLYPNIYAAGDVVGPYQFTHVAAHQAWYAAVNGLFGHLKKFKVDYRVIPWTTFIDPEVAR HHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECEEEECCCHHHH VGLNEQEAIDKGIDFEITRYDFKDLDRAVTESANHGFIKVITPKGKDKILGVTIVAEHAG CCCCHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEHHHH DLMAEFVLAMKHNLGLNKILGTIHIYPTWAEGNKYAAGEWKRNHAPKKALQLLEKYHTWR HHHHHHHHHHHHCCCHHHHEEEEEEEEEECCCCCEECCCCHHCCCHHHHHHHHHHHHHHC RG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536669; 10559175; 2067577 [H]