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The map label for this gene is ynjB [H]

Identifier: 93005804

GI number: 93005804

Start: 1162684

End: 1163991

Strand: Reverse

Name: ynjB [H]

Synonym: Pcryo_0976

Alternate gene names: 93005804

Gene position: 1163991-1162684 (Counterclockwise)

Preceding gene: 93005805

Following gene: 93005803

Centisome position: 38.04

GC content: 46.41

Gene sequence:

>1308_bases
ATGCAACCTCCTAGCTTGCCAGCAGCCTTTACAATACCAAAAAAACTGAGCCGCTATAGCGCCTTTATCATAGTGCTTGG
TATATGTGTTGGCATCTCTGCAAGTACCGCTTCGACTCCCACTGCTATGGATAATAAAGATACCTCGCAGTGGCAGCAGA
CAGTACAAGCTGGTGAAAATCAGGATGTTTACTTTCATACCTGGGGCGGGGATCCGCAAATTAATGCCTATATTCAGTGG
ACTGCAAAAGCGGTCGATAAAAAATATAATATTAACTTGGTTCATGTCAAATTAAGCGACACCAGTGAAGCTGTCAGCCG
TGTCCTTGCAGAAAAATCTGCCAATAATAATAAAAAAGGTAGCGTTGATTTAATTTGGATCAACGGTGCGAACTTTGCCG
CTATGAGTGAGAATAAATTACTATTAAAGGACTGGGCATCTACTCTGCCAAACTTTGCGCTGACTGATCCTGATAACAAC
CCCTCTGTCACGCTTGATTTTGGTTTACCTACTGACGGTATGGAAGCGCCATGGGGACAAGCATCACTGACTTTTTATTA
TGATAACTTAGCGATAGATAAACCGCCTGCTACCTTGCAGCAATTAAGCGCTTGGGCACAGCAGAACCCCGGACGTTTTG
GCTACCCAAAGCCGCCTGATTTTTTGGGTATGAGTTTTTTGAAGTATGCTTTGGTCATGCTGCATGAGCAAAACGATAGT
AAGAATGGAACCACTCTCAGAGCAGAGCTTAACCAGCCGGTAAATGCACAAAACAAAGATTTGATACTCAATCCGCTGTG
GGACTTTTTGGATGAGCTGCATCCCATGCTATGGCGAAAAGGTGAGCAATTCCTGCAAAGCGGCGCACAAATGCGCCGTT
TGGTAGATGATACGGAGCTAAGCTTGGCCTTTACCTTTTCAGGACCCGAAATACCAGCTGCCGTTCAGCGCTATGATTTG
CCGCCCAGTATTCGCAGTTATGCCATGACAGATGGCAGTTTGAGCAATACTCACTTCGTTGCTATTCCTTATAACGCAAG
CCATGCAGCCGCAGCACAATTGGTGGCAAACTTTTTATTAAGCCCAGACGCACAGGCGCATAAACAAAACCCAGCTGTCT
GGGGAGATAAAACCGTGCTGGTTCAATCGACACTGAGCGCCGAGCAGCAAGCACTCTTTAAAGCCAATAAACCGCATGCA
AGCGCCCTACCTTTTGATGCTATCAAACGAACCGTCAGTGAACCACACCCCAGCTGGGTTGACGCCATTATGCAAGGTTG
GCAAGCACGCTACGGGGTTAGCGAATGA

Upstream 100 bases:

>100_bases
AGGCAATAAGTATGCAGCTGGCGAATGGAAACGCAATCATGCGCCTAAAAAAGCGCTACAGTTGCTTGAGAAGTATCATA
CTTGGCGTCGAGGTTAATTC

Downstream 100 bases:

>100_bases
AAAAATCCGTTCATAAAAGCAAGGTTAATACTGATAACAACAATATTAATGGCGTGAATACTGATACTCTTAATGCTGCT
ATCATTCATTCTAATTTAAG

Product: putative ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MQPPSLPAAFTIPKKLSRYSAFIIVLGICVGISASTASTPTAMDNKDTSQWQQTVQAGENQDVYFHTWGGDPQINAYIQW
TAKAVDKKYNINLVHVKLSDTSEAVSRVLAEKSANNNKKGSVDLIWINGANFAAMSENKLLLKDWASTLPNFALTDPDNN
PSVTLDFGLPTDGMEAPWGQASLTFYYDNLAIDKPPATLQQLSAWAQQNPGRFGYPKPPDFLGMSFLKYALVMLHEQNDS
KNGTTLRAELNQPVNAQNKDLILNPLWDFLDELHPMLWRKGEQFLQSGAQMRRLVDDTELSLAFTFSGPEIPAAVQRYDL
PPSIRSYAMTDGSLSNTHFVAIPYNASHAAAAQLVANFLLSPDAQAHKQNPAVWGDKTVLVQSTLSAEQQALFKANKPHA
SALPFDAIKRTVSEPHPSWVDAIMQGWQARYGVSE

Sequences:

>Translated_435_residues
MQPPSLPAAFTIPKKLSRYSAFIIVLGICVGISASTASTPTAMDNKDTSQWQQTVQAGENQDVYFHTWGGDPQINAYIQW
TAKAVDKKYNINLVHVKLSDTSEAVSRVLAEKSANNNKKGSVDLIWINGANFAAMSENKLLLKDWASTLPNFALTDPDNN
PSVTLDFGLPTDGMEAPWGQASLTFYYDNLAIDKPPATLQQLSAWAQQNPGRFGYPKPPDFLGMSFLKYALVMLHEQNDS
KNGTTLRAELNQPVNAQNKDLILNPLWDFLDELHPMLWRKGEQFLQSGAQMRRLVDDTELSLAFTFSGPEIPAAVQRYDL
PPSIRSYAMTDGSLSNTHFVAIPYNASHAAAAQLVANFLLSPDAQAHKQNPAVWGDKTVLVQSTLSAEQQALFKANKPHA
SALPFDAIKRTVSEPHPSWVDAIMQGWQARYGVSE
>Mature_435_residues
MQPPSLPAAFTIPKKLSRYSAFIIVLGICVGISASTASTPTAMDNKDTSQWQQTVQAGENQDVYFHTWGGDPQINAYIQW
TAKAVDKKYNINLVHVKLSDTSEAVSRVLAEKSANNNKKGSVDLIWINGANFAAMSENKLLLKDWASTLPNFALTDPDNN
PSVTLDFGLPTDGMEAPWGQASLTFYYDNLAIDKPPATLQQLSAWAQQNPGRFGYPKPPDFLGMSFLKYALVMLHEQNDS
KNGTTLRAELNQPVNAQNKDLILNPLWDFLDELHPMLWRKGEQFLQSGAQMRRLVDDTELSLAFTFSGPEIPAAVQRYDL
PPSIRSYAMTDGSLSNTHFVAIPYNASHAAAAQLVANFLLSPDAQAHKQNPAVWGDKTVLVQSTLSAEQQALFKANKPHA
SALPFDAIKRTVSEPHPSWVDAIMQGWQARYGVSE

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=385, Percent_Identity=40.5194805194805, Blast_Score=265, Evalue=6e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47978; Mature: 47978

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPPSLPAAFTIPKKLSRYSAFIIVLGICVGISASTASTPTAMDNKDTSQWQQTVQAGEN
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
QDVYFHTWGGDPQINAYIQWTAKAVDKKYNINLVHVKLSDTSEAVSRVLAEKSANNNKKG
CCEEEEECCCCCCEEEEEEEEEHHCCCEECEEEEEEEECCHHHHHHHHHHHHCCCCCCCC
SVDLIWINGANFAAMSENKLLLKDWASTLPNFALTDPDNNPSVTLDFGLPTDGMEAPWGQ
CEEEEEECCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCC
ASLTFYYDNLAIDKPPATLQQLSAWAQQNPGRFGYPKPPDFLGMSFLKYALVMLHEQNDS
CEEEEEEECEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
KNGTTLRAELNQPVNAQNKDLILNPLWDFLDELHPMLWRKGEQFLQSGAQMRRLVDDTEL
CCCCEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
SLAFTFSGPEIPAAVQRYDLPPSIRSYAMTDGSLSNTHFVAIPYNASHAAAAQLVANFLL
EEEEEECCCCCCHHHHHCCCCHHHHHHEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHC
SPDAQAHKQNPAVWGDKTVLVQSTLSAEQQALFKANKPHASALPFDAIKRTVSEPHPSWV
CCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHH
DAIMQGWQARYGVSE
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MQPPSLPAAFTIPKKLSRYSAFIIVLGICVGISASTASTPTAMDNKDTSQWQQTVQAGEN
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
QDVYFHTWGGDPQINAYIQWTAKAVDKKYNINLVHVKLSDTSEAVSRVLAEKSANNNKKG
CCEEEEECCCCCCEEEEEEEEEHHCCCEECEEEEEEEECCHHHHHHHHHHHHCCCCCCCC
SVDLIWINGANFAAMSENKLLLKDWASTLPNFALTDPDNNPSVTLDFGLPTDGMEAPWGQ
CEEEEEECCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCC
ASLTFYYDNLAIDKPPATLQQLSAWAQQNPGRFGYPKPPDFLGMSFLKYALVMLHEQNDS
CEEEEEEECEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
KNGTTLRAELNQPVNAQNKDLILNPLWDFLDELHPMLWRKGEQFLQSGAQMRRLVDDTEL
CCCCEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
SLAFTFSGPEIPAAVQRYDLPPSIRSYAMTDGSLSNTHFVAIPYNASHAAAAQLVANFLL
EEEEEECCCCCCHHHHHCCCCHHHHHHEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHC
SPDAQAHKQNPAVWGDKTVLVQSTLSAEQQALFKANKPHASALPFDAIKRTVSEPHPSWV
CCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHH
DAIMQGWQARYGVSE
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]