| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is hemK [H]
Identifier: 92113654
GI number: 92113654
Start: 1743165
End: 1744025
Strand: Direct
Name: hemK [H]
Synonym: Csal_1530
Alternate gene names: 92113654
Gene position: 1743165-1744025 (Clockwise)
Preceding gene: 92113653
Following gene: 92113655
Centisome position: 47.16
GC content: 71.08
Gene sequence:
>861_bases ATGACCTTCGATGCCTTGCTGGCACGCGCGACGATGCGGCTGCAGGCCTCGGGGAGCCCCTCGCCGCGTCTGGACGCTGA GGTGCTGATGATGCATGCCGCGGACGTCACGCGAGCCTGGCTGTATACCTGGGGCGACCGCGAGATTGTGCCTCCGGCAT GGGCCCGGTTCGACGCCCTGATCGCGGCGCGGTCGCTGGGGCATCCCGTGGCGCACCTGACCGGGGAGCGTGAATTCTGG GGGCTCGTGCTGCGTGTCGACGACACGACGCTCATTCCGCGCCCCGACACCGAATGCCTGGTCGAAGCGCTGCTGGCTCG CATGCCGCATGCCACCGGGCGCGCGCTCGATCTGGGCACGGGATCGGGTGCCATCGCGCTGGCGCTCGCCTCGGAGCGAC CGGCGTGGCATGTCGTCGGGGTCGACAAGGTACCCGGCGCCGTACGCCTGGCGACGGCCAATGCGGAGCGCCTGGCACTG AGCAACGCCACCTTCCTGGTCAGCGACTGGTTCTCTGCCCTCGGCAACGAGACGTTCGACGTGATCGCGGCCAACCCGCC CTATATCGCCGAGGACGACCCGCATCTCGCCCAGGGCGACGTGCGTTTCGAGCCCCGCTCGGCCCTGGTGGCGGAAGACG CCGGGCTTGCCGACCTGTGTCACCTCGCGCTGACCGCGCGGGCCCATCTCGCTGGGGGCGGCTGGCTGGCCATGGAGCAC GGCATGACGCAGGCGGCGCGGGTGCGCGAGATCCTGACGAGTGCCGGTTATCGCGATGTCGCCAGTGTCGCGGACCTCGG GGCCCGCGAGCGCGTCACTCTGGGGCGTGCGCCCGATGCGGCGGGGCACGGCGCTCGTTGA
Upstream 100 bases:
>100_bases ACAAGCTCGGCGACGTGATGGCGGGTGAGCTCGGCGAGGTGATCGATCCCTTGATCCACGAGTACCAGGCCGAGCAACTG TCGGCCCTGCAGGCCTCGTG
Downstream 100 bases:
>100_bases TTCGACGCACGTGGGGACAGACTCGATGCGCGTGGAGGAAGGCGCGGCGCGTCTGGAGGCGCGGGCGGCGAATGTGGTAG TAATACGCCTCGCACTCGAC
Product: HemK family modification methylase
Products: NA
Alternate protein names: M.EcoKHemKP; Protein-(glutamine-N(5)) MTase hemK; Protein-glutamine N-methyltransferase hemK [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTFDALLARATMRLQASGSPSPRLDAEVLMMHAADVTRAWLYTWGDREIVPPAWARFDALIAARSLGHPVAHLTGEREFW GLVLRVDDTTLIPRPDTECLVEALLARMPHATGRALDLGTGSGAIALALASERPAWHVVGVDKVPGAVRLATANAERLAL SNATFLVSDWFSALGNETFDVIAANPPYIAEDDPHLAQGDVRFEPRSALVAEDAGLADLCHLALTARAHLAGGGWLAMEH GMTQAARVREILTSAGYRDVASVADLGARERVTLGRAPDAAGHGAR
Sequences:
>Translated_286_residues MTFDALLARATMRLQASGSPSPRLDAEVLMMHAADVTRAWLYTWGDREIVPPAWARFDALIAARSLGHPVAHLTGEREFW GLVLRVDDTTLIPRPDTECLVEALLARMPHATGRALDLGTGSGAIALALASERPAWHVVGVDKVPGAVRLATANAERLAL SNATFLVSDWFSALGNETFDVIAANPPYIAEDDPHLAQGDVRFEPRSALVAEDAGLADLCHLALTARAHLAGGGWLAMEH GMTQAARVREILTSAGYRDVASVADLGARERVTLGRAPDAAGHGAR >Mature_285_residues TFDALLARATMRLQASGSPSPRLDAEVLMMHAADVTRAWLYTWGDREIVPPAWARFDALIAARSLGHPVAHLTGEREFWG LVLRVDDTTLIPRPDTECLVEALLARMPHATGRALDLGTGSGAIALALASERPAWHVVGVDKVPGAVRLATANAERLALS NATFLVSDWFSALGNETFDVIAANPPYIAEDDPHLAQGDVRFEPRSALVAEDAGLADLCHLALTARAHLAGGGWLAMEHG MTQAARVREILTSAGYRDVASVADLGARERVTLGRAPDAAGHGAR
Specific function: Methylates the translation termination release factor RF1/PrfA on 'Gln-235' and RF2/PrfB on 'Gln-252' [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=187, Percent_Identity=34.2245989304813, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1787463, Length=276, Percent_Identity=52.536231884058, Blast_Score=281, Evalue=4e-77, Organism=Escherichia coli, GI87082085, Length=175, Percent_Identity=33.7142857142857, Blast_Score=77, Evalue=1e-15, Organism=Drosophila melanogaster, GI24582226, Length=276, Percent_Identity=25, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 30485; Mature: 30354
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDALLARATMRLQASGSPSPRLDAEVLMMHAADVTRAWLYTWGDREIVPPAWARFDAL CCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHH IAARSLGHPVAHLTGEREFWGLVLRVDDTTLIPRPDTECLVEALLARMPHATGRALDLGT HHHHHCCCCHHHHCCCCCEEEEEEEECCCEECCCCCHHHHHHHHHHHCCCCCCCEEEECC GSGAIALALASERPAWHVVGVDKVPGAVRLATANAERLALSNATFLVSDWFSALGNETFD CCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCHHEEECCCEEHHHHHHHHHCCCCEE VIAANPPYIAEDDPHLAQGDVRFEPRSALVAEDAGLADLCHLALTARAHLAGGGWLAMEH EEECCCCCCCCCCCCCCCCCEEECCCHHEEECCCCHHHHHHHHHHHHHHCCCCCEEEECC GMTQAARVREILTSAGYRDVASVADLGARERVTLGRAPDAAGHGAR CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure TFDALLARATMRLQASGSPSPRLDAEVLMMHAADVTRAWLYTWGDREIVPPAWARFDAL CHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHH IAARSLGHPVAHLTGEREFWGLVLRVDDTTLIPRPDTECLVEALLARMPHATGRALDLGT HHHHHCCCCHHHHCCCCCEEEEEEEECCCEECCCCCHHHHHHHHHHHCCCCCCCEEEECC GSGAIALALASERPAWHVVGVDKVPGAVRLATANAERLALSNATFLVSDWFSALGNETFD CCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCHHEEECCCEEHHHHHHHHHCCCCEE VIAANPPYIAEDDPHLAQGDVRFEPRSALVAEDAGLADLCHLALTARAHLAGGGWLAMEH EEECCCCCCCCCCCCCCCCCEEECCCHHEEECCCCHHHHHHHHHHHHHHCCCCCEEEECC GMTQAARVREILTSAGYRDVASVADLGARERVTLGRAPDAAGHGAR CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7883187; 7543480; 11805295; 8905232; 9278503 [H]