Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789841

Identifier: 91789841

GI number: 91789841

Start: 4198376

End: 4200346

Strand: Direct

Name: 91789841

Synonym: Bpro_4001

Alternate gene names: NA

Gene position: 4198376-4200346 (Clockwise)

Preceding gene: 91789840

Following gene: 91789842

Centisome position: 80.73

GC content: 50.48

Gene sequence:

>1971_bases
ATGGCTGAGAGTTTCGTTCTGCCCGGGGGGCTGATTGGTCGCTTTGCCGTGGTCAAGTTGTGGCCAGCGATCAAGACGGC
AGAGGACGAATGCATAGCCCGGTTAAAAATCGCGGCAACTGCTCTTGGCCTGGATTGTGTCGAAGTTCATGCCAATGGCT
CACTCTTGAGTGACCCGGATACCGTGATAACCAAAAAAGATGTTGATTTTGTTTTGCATCTTCATTACGACACGCCCAAA
TTCTATGATGCATTTTCATTTGTAGCCCTGTGGAACCCGACTCAGTTCTACCATGAGTGGGGCTATCAACGTACCTCGCG
AAATTTGTTAACCCACGATGATTTCGTCAGTTGCAGTTCACCAGCAGCAGATGATCATGTAGGACGTATGGTGCGAAGTG
CTGCAACACATCTTCCCGCACTATTTAACCTTTACCACTCCACGGCCGATATTGTCCATCCGCCCTCACTGGGTGACCAC
AAGCTCTTTTACGCGGGGATTAACTGGGAAGCCATTAGTGGTGGCAAATCCCGCCATCAGGACGTACTCAAGCGCCTCGA
CCAGGCCGGGCTCATTCGCATCTATGGCCCAACAATATTTCAGAACGTGAAAGTCTGGGATGGGTACGCCAACTACGTGC
GAGAGATTCCGTTTGACGGGGTTTCCATGCTCGACGAAATAGCAAAGGCAGGTATTGCTCTGGTCTTATCCTCGCAAGCA
CACAAAAATTCAGAGCTGATGTCAAATCGACTGTTCGAAAGTGTGGCAGCCGGGGCATTGGTTATTTGCGACGAAAACAA
CTTTGCCAGAAGATTCTTTGGCGATTCCCTGCTCTATATTGACAGCCGCTGCTCCGTCGAGCAAATTTTTGAAGACATTC
AAAAGCACCTGACTTGGGCAAAAGCGAATCCAGGTGAAGCGCTTTCCTTGATCAAAAAAGCGCAGGGGATTTTCAGGGAA
AAATTCACGCTGAAGAAAAACCTGAGAGATCTTTATGCAGGCTTTCAAGACCGGAAAGCCAATTTACTAAAGAGACAAGG
ACTGGACGGCCAGGCACCACACATCAAGGTTGGCCTCTACCTTCTTCTGCCGGTGTATTCAGAGAAAGTTTTGCACGCAC
ACGTCGCCAGCGTCGTGGCTCAGGAATACAAAGAGTTTTCACCGGTTCTGGTTATCGACAAAGCCTTCTCGACGCAGAAT
CGATCTGATATTGCGCAAGTCCTTGAAAAGGCATCGGTACCAATTGAGTTAATTGCGGTCGACTTCTTTAACTACGGATC
TGTGGCCGACATCCAATACCCCCGTAAACTTGGTGCGGTTATTGCTGATGTGCTGAAAAACGCCCAGCAAGTAGAGGCCA
TCGTAGTTGTTGCACCCAATGAAGAGATTTTCTCAAATCACCTTCAGGTTCTTGCCTGCAGTTTGATACGCAACCCGGAC
GCAAACTGCGCGGCCACGGCTGCCATCATCAAACACGGAAACACCCCGGTGCACGGGATACATGAGCTATTGAACTTCGG
CTTCCTCAATCCGGCTGCTCCACACGGCTATGCACGCTTTATTTTCCGGACTTCAGCGCTCCCTGCTGATCTGGGTATAG
CCCTGCCTTATTTGGATAGAAAATCGCTGGCCGCCATGGTCGGTGAAAATGTTATCCATCAGGAAATTCCGGCAACACTG
GTCATTGATGTAGGGCAAGAGTTCCCCAATGGCCCATGGGACGAAGGGCAGGAAAATGAGTTGATAGGAGACTTTGCTCC
AAAGTCATTCACCATTTATAAAGGTTTCACCCGTGATTTGCCCTCGCTGGAACCTCGCATCGCAGCCCCTGCCCCGCCCC
CTCCTTACCCAAGGCTCAGTTGGCGCTGGTTGTCCCACCAAGTCAGAGCGCTGCGCGCGGACGGTTTATTGGCGCGGTTC
AGGGTTCTGAAAACCAGACTCGGGTTTGAACACGTTGACCATGCTGTTTAA

Upstream 100 bases:

>100_bases
CGGTCAATTTCCGGTCGTATCACTGCAATGGGCTACTAACCTCCGCTTGAGATTAATAGCGCCTGTTCGTTTCTATAAAT
AATCATGGGAAAGTAATAGC

Downstream 100 bases:

>100_bases
ACAGAAACAACATGGCTAAACGCTTTAGCTAAAGCCATCCAGTCAAATATGAATCCTCACGCCGCAAAACCAATCTCATT
GGCCTCACTTGCTCGAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 656; Mature: 655

Protein sequence:

>656_residues
MAESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPDTVITKKDVDFVLHLHYDTPK
FYDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSSPAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDH
KLFYAGINWEAISGGKSRHQDVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQA
HKNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWAKANPGEALSLIKKAQGIFRE
KFTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLYLLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQN
RSDIAQVLEKASVPIELIAVDFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPD
ANCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDRKSLAAMVGENVIHQEIPATL
VIDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDLPSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARF
RVLKTRLGFEHVDHAV

Sequences:

>Translated_656_residues
MAESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPDTVITKKDVDFVLHLHYDTPK
FYDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSSPAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDH
KLFYAGINWEAISGGKSRHQDVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQA
HKNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWAKANPGEALSLIKKAQGIFRE
KFTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLYLLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQN
RSDIAQVLEKASVPIELIAVDFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPD
ANCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDRKSLAAMVGENVIHQEIPATL
VIDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDLPSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARF
RVLKTRLGFEHVDHAV
>Mature_655_residues
AESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPDTVITKKDVDFVLHLHYDTPKF
YDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSSPAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDHK
LFYAGINWEAISGGKSRHQDVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQAH
KNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWAKANPGEALSLIKKAQGIFREK
FTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLYLLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQNR
SDIAQVLEKASVPIELIAVDFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPDA
NCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDRKSLAAMVGENVIHQEIPATLV
IDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDLPSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARFR
VLKTRLGFEHVDHAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72851; Mature: 72720

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPD
CCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
TVITKKDVDFVLHLHYDTPKFYDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSS
CEEEECCCEEEEEEECCCCHHHHHHHEEEECCCHHHHHHHCCHHHCCCCCCCCCCCCCCC
PAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDHKLFYAGINWEAISGGKSRHQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCHHHH
DVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQA
HHHHHHHHCCEEEEECCHHHCCCEEECHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCC
HKNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWA
CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEEC
KANPGEALSLIKKAQGIFREKFTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEHE
LLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQNRSDIAQVLEKASVPIELIAV
EEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE
DFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPD
EECCCCCEECCCCHHHHHHHHHHHHHCHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCC
ANCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDR
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCH
KSLAAMVGENVIHQEIPATLVIDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDL
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
PSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARFRVLKTRLGFEHVDHAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHCCC
>Mature Secondary Structure 
AESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPD
CCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
TVITKKDVDFVLHLHYDTPKFYDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSS
CEEEECCCEEEEEEECCCCHHHHHHHEEEECCCHHHHHHHCCHHHCCCCCCCCCCCCCCC
PAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDHKLFYAGINWEAISGGKSRHQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCHHHH
DVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQA
HHHHHHHHCCEEEEECCHHHCCCEEECHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCC
HKNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWA
CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEEC
KANPGEALSLIKKAQGIFREKFTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEHE
LLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQNRSDIAQVLEKASVPIELIAV
EEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE
DFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPD
EECCCCCEECCCCHHHHHHHHHHHHHCHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCC
ANCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDR
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCH
KSLAAMVGENVIHQEIPATLVIDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDL
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
PSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARFRVLKTRLGFEHVDHAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA