| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789383
Identifier: 91789383
GI number: 91789383
Start: 3731459
End: 3732835
Strand: Reverse
Name: 91789383
Synonym: Bpro_3529
Alternate gene names: NA
Gene position: 3732835-3731459 (Counterclockwise)
Preceding gene: 91789384
Following gene: 91789382
Centisome position: 71.78
GC content: 59.99
Gene sequence:
>1377_bases ATGAAGTTCAAACTACTTGCCACAGCGGCGTTCATGACCACGGCGCTTTTAGCCGGCGGCCATGCAGCAGCCCAGGAGAA ACTCACCGTCTGGTGGGTCAAGGGCTTCTACAAGGCCGAAGACGATGCCCTGTTTGCGGCCATCAAGAAGTACGAAGACA AGCACAAGGGTGTCAAGATCGAGCTTTCGCAATACCCGATTCAGGACATGATTCCGAAGACCGTGGCGGCGCTCGACTCG GGCAACCCGCCCGACGTGGCTTATGCGGACGTCTATGACTTCCAGGTCACGGGCAAGTGGGCTTTCGACGGCAAGCTCGA AGACATCAGCAGCGTGATCAATCCCATGCGCGCCAAGTTCGCGCCCAACACGGTCGAGACCGCCTTCCTGTACAACGACC AGGCCAAGACGCGGGCGTACTACGCCTTCCCGATGAAGCAGCAGACCATGCACATCCAGTACTGGGCTGACATGCTGGCG GAGGCCGGGTTCAAGGAGTCGGACATTCCGACGGCCTGGAAGGACTACTGGTCCTTCTGGTGCGACAAGGTGCAGCCGGC CTATCGTCAGAAAAGCGGCAACCGCACTTTCGGCATCGGCCAGCCGCTGGGCGTGGATTCCAGCGACTCGTTCTACTCCT TCCTCACGTTCATGGACGCCTATAACGTGAGCCTGGTCAGCGACAGCGGCAAGCTGCTGGTGGATGATCCCAAGGTGCGC GCCGGCCTCATCGGCGCCCTGACCGATTACACCCAGATTTACGCCAGGGGCTGCACGCCACCGTCGTCGACCAGCTGGAA AGACCCGGACAACAACGTCGCCTTCCACAACAAAACGACCGTCCTCACCCACAATGCGACCATCTCGATCGCGGCCAAAT GGCTCGATGACATGAACAACGCCGCCTTGAAGCCCGAGGATCGGGAGATCGCGAAGAAGAACTACACGGAGCGCATCCGC ACCGCCGGTTTCCCGAGCAAGCCCGATGGCAGCAAGATGGTCTATCGTGCCGCGATCAAGACCGGCGTGGTTTTCAGCCA GGCCAAGAACAAGGCCCGCGCCAAGGAGTTTGTGGCCTTCCTGCTGCAGGATGAAAACCTCACGCCGTACGTCGAGGGCT CGCTGGGCCGCTGGTTCCCGGTGATGAAGGCGGCGCAGCAGCGCCCGTTCTGGAAAGCCGATCCGCATCGCACAGCCGTG TACAACCAGTTCACGGCCGGCACGGTGAATTTCGAGTTCACCAAGAACTACAAGTTCACCGTTCTCAACAACGAGAACGT CTGGGCCAAGGCCGCGAACCGGGTTCTCAACGAGAAAGTGCCGGTTGACAAGGCGGTCGACGAAATGATCGCCCGCATCA AGACCGTCGCGAACTAA
Upstream 100 bases:
>100_bases TCCCGCCGCCGCCTGCCCCGCGTCCACCGACCTGCTTTGCCGTTGAAGGCGGCCTGATTCCCGTAAGCTTTTCCTCACCA ACCAAAGAAGGAGACTGTCG
Downstream 100 bases:
>100_bases GAGCCAAGTCTGTTCATCAAAGAAAGCCGCGCAACCGTTCCCCTCGCGGGAGCGGTTGCGCGAGGAGCGATGCCATGAGC ACTATCACTGTAGACCAGGT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKFKLLATAAFMTTALLAGGHAAAQEKLTVWWVKGFYKAEDDALFAAIKKYEDKHKGVKIELSQYPIQDMIPKTVAALDS GNPPDVAYADVYDFQVTGKWAFDGKLEDISSVINPMRAKFAPNTVETAFLYNDQAKTRAYYAFPMKQQTMHIQYWADMLA EAGFKESDIPTAWKDYWSFWCDKVQPAYRQKSGNRTFGIGQPLGVDSSDSFYSFLTFMDAYNVSLVSDSGKLLVDDPKVR AGLIGALTDYTQIYARGCTPPSSTSWKDPDNNVAFHNKTTVLTHNATISIAAKWLDDMNNAALKPEDREIAKKNYTERIR TAGFPSKPDGSKMVYRAAIKTGVVFSQAKNKARAKEFVAFLLQDENLTPYVEGSLGRWFPVMKAAQQRPFWKADPHRTAV YNQFTAGTVNFEFTKNYKFTVLNNENVWAKAANRVLNEKVPVDKAVDEMIARIKTVAN
Sequences:
>Translated_458_residues MKFKLLATAAFMTTALLAGGHAAAQEKLTVWWVKGFYKAEDDALFAAIKKYEDKHKGVKIELSQYPIQDMIPKTVAALDS GNPPDVAYADVYDFQVTGKWAFDGKLEDISSVINPMRAKFAPNTVETAFLYNDQAKTRAYYAFPMKQQTMHIQYWADMLA EAGFKESDIPTAWKDYWSFWCDKVQPAYRQKSGNRTFGIGQPLGVDSSDSFYSFLTFMDAYNVSLVSDSGKLLVDDPKVR AGLIGALTDYTQIYARGCTPPSSTSWKDPDNNVAFHNKTTVLTHNATISIAAKWLDDMNNAALKPEDREIAKKNYTERIR TAGFPSKPDGSKMVYRAAIKTGVVFSQAKNKARAKEFVAFLLQDENLTPYVEGSLGRWFPVMKAAQQRPFWKADPHRTAV YNQFTAGTVNFEFTKNYKFTVLNNENVWAKAANRVLNEKVPVDKAVDEMIARIKTVAN >Mature_458_residues MKFKLLATAAFMTTALLAGGHAAAQEKLTVWWVKGFYKAEDDALFAAIKKYEDKHKGVKIELSQYPIQDMIPKTVAALDS GNPPDVAYADVYDFQVTGKWAFDGKLEDISSVINPMRAKFAPNTVETAFLYNDQAKTRAYYAFPMKQQTMHIQYWADMLA EAGFKESDIPTAWKDYWSFWCDKVQPAYRQKSGNRTFGIGQPLGVDSSDSFYSFLTFMDAYNVSLVSDSGKLLVDDPKVR AGLIGALTDYTQIYARGCTPPSSTSWKDPDNNVAFHNKTTVLTHNATISIAAKWLDDMNNAALKPEDREIAKKNYTERIR TAGFPSKPDGSKMVYRAAIKTGVVFSQAKNKARAKEFVAFLLQDENLTPYVEGSLGRWFPVMKAAQQRPFWKADPHRTAV YNQFTAGTVNFEFTKNYKFTVLNNENVWAKAANRVLNEKVPVDKAVDEMIARIKTVAN
Specific function: Unknown
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51510; Mature: 51510
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKLLATAAFMTTALLAGGHAAAQEKLTVWWVKGFYKAEDDALFAAIKKYEDKHKGVKI CCEEEHHHHHHHHHHHHHCCCHHHCCCEEEEEEECEEECCCHHHHHHHHHHHHHHCCEEE ELSQYPIQDMIPKTVAALDSGNPPDVAYADVYDFQVTGKWAFDGKLEDISSVINPMRAKF EECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHC APNTVETAFLYNDQAKTRAYYAFPMKQQTMHIQYWADMLAEAGFKESDIPTAWKDYWSFW CCCCEEEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH CDKVQPAYRQKSGNRTFGIGQPLGVDSSDSFYSFLTFMDAYNVSLVSDSGKLLVDDPKVR HHHCCHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEEECCCHH AGLIGALTDYTQIYARGCTPPSSTSWKDPDNNVAFHNKTTVLTHNATISIAAKWLDDMNN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEECCEEEEHHHHHHCCCC AALKPEDREIAKKNYTERIRTAGFPSKPDGSKMVYRAAIKTGVVFSQAKNKARAKEFVAF CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQDENLTPYVEGSLGRWFPVMKAAQQRPFWKADPHRTAVYNQFTAGTVNFEFTKNYKFT HHCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHEECEECCEEEEEEECCEEEE VLNNENVWAKAANRVLNEKVPVDKAVDEMIARIKTVAN EECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFKLLATAAFMTTALLAGGHAAAQEKLTVWWVKGFYKAEDDALFAAIKKYEDKHKGVKI CCEEEHHHHHHHHHHHHHCCCHHHCCCEEEEEEECEEECCCHHHHHHHHHHHHHHCCEEE ELSQYPIQDMIPKTVAALDSGNPPDVAYADVYDFQVTGKWAFDGKLEDISSVINPMRAKF EECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHC APNTVETAFLYNDQAKTRAYYAFPMKQQTMHIQYWADMLAEAGFKESDIPTAWKDYWSFW CCCCEEEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH CDKVQPAYRQKSGNRTFGIGQPLGVDSSDSFYSFLTFMDAYNVSLVSDSGKLLVDDPKVR HHHCCHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEEECCCHH AGLIGALTDYTQIYARGCTPPSSTSWKDPDNNVAFHNKTTVLTHNATISIAAKWLDDMNN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEECCEEEEHHHHHHCCCC AALKPEDREIAKKNYTERIRTAGFPSKPDGSKMVYRAAIKTGVVFSQAKNKARAKEFVAF CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQDENLTPYVEGSLGRWFPVMKAAQQRPFWKADPHRTAVYNQFTAGTVNFEFTKNYKFT HHCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHEECEECCEEEEEEECCEEEE VLNNENVWAKAANRVLNEKVPVDKAVDEMIARIKTVAN EECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA