Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yurN [H]

Identifier: 91789382

GI number: 91789382

Start: 3730512

End: 3731384

Strand: Reverse

Name: yurN [H]

Synonym: Bpro_3528

Alternate gene names: 91789382

Gene position: 3731384-3730512 (Counterclockwise)

Preceding gene: 91789383

Following gene: 91789381

Centisome position: 71.75

GC content: 59.22

Gene sequence:

>873_bases
ATGAGCACTATCACTGTAGACCAGGTGCGCCCGTCCGCGGAGTCTGCCAGCAAGGGCATGACGTCGTGGGAACGATGGGG
GATGATCCTGGTCATTCCGTACTTGCTGATTTTTCTGGTGTTTGTGATTTACCCGGTGGGCTACGGTTTGTGGCTGGCGC
GGGAGCCACAAACCTACGTGCGACTTTTCGCCGATCCGATATTTTTCCGCACGATGGTCAACAGCGTCGTGTTCATCATC
GTCTCGGTGAATCTGAAGATGATTGTCGCGCTGTTTCTCTCGGGCTTCTTCCTGAATACACGCTGGTGGGTCAAGTGGCT
GTCGCTGGTGTTCATCCTGCCCTGGGCCGTACCCTCGATCCCGACCATCCTGTCGATGCGCTTCATGCTCAATCCCGAGT
GGGGCGTGATCAACACCCTGATCTTCAAGCTGACCGGCATCGACGGCCCGAACTGGCTCAACGACCCGACGCTGGCGCTG
TCGTTTTCCATGCTGGCCCACATCTGGAAATCGCTGCCCTTCTGGACCTTGATCCTGCTGGCCGGCCGCATGGCGATTCC
GGCCGAACAATACGAAGCGGCGTCGGTGGATGGCGCTTCGCACTGGCAGAAGTTCCGCTTCATCACCTGGCCGTCCATGC
GTTCGCTTTACCTGACGTCCACCATTTTGTCGATGATCTGGACGCTGGGCGACTTCAATAGCGTGTACCTGCTCACCGGC
GGTGGCCCGGCTGACCTGACGCACGTGCTGGCCACGCTGGGCATCCGCTACCTGCGGCTAGACCAGGTCGACCTGTCGCT
GGCCTCCATCGTCGTGGCGCTGCCGCTGGTGCTGCCGCTGGTCTATTTCATGATGAAACGGCTCTCGAAATGA

Upstream 100 bases:

>100_bases
CCCGCATCAAGACCGTCGCGAACTAAGAGCCAAGTCTGTTCATCAAAGAAAGCCGCGCAACCGTTCCCCTCGCGGGAGCG
GTTGCGCGAGGAGCGATGCC

Downstream 100 bases:

>100_bases
ACCTCTACGCTTGTCGCCGCGCGTACTGCGCTGCCTCCGAGGGCGTATTTGCTCTCCTGGATGCGGCTCGTCGGAGCTCC
AAATGAAACGTATCACCTTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSTITVDQVRPSAESASKGMTSWERWGMILVIPYLLIFLVFVIYPVGYGLWLAREPQTYVRLFADPIFFRTMVNSVVFII
VSVNLKMIVALFLSGFFLNTRWWVKWLSLVFILPWAVPSIPTILSMRFMLNPEWGVINTLIFKLTGIDGPNWLNDPTLAL
SFSMLAHIWKSLPFWTLILLAGRMAIPAEQYEAASVDGASHWQKFRFITWPSMRSLYLTSTILSMIWTLGDFNSVYLLTG
GGPADLTHVLATLGIRYLRLDQVDLSLASIVVALPLVLPLVYFMMKRLSK

Sequences:

>Translated_290_residues
MSTITVDQVRPSAESASKGMTSWERWGMILVIPYLLIFLVFVIYPVGYGLWLAREPQTYVRLFADPIFFRTMVNSVVFII
VSVNLKMIVALFLSGFFLNTRWWVKWLSLVFILPWAVPSIPTILSMRFMLNPEWGVINTLIFKLTGIDGPNWLNDPTLAL
SFSMLAHIWKSLPFWTLILLAGRMAIPAEQYEAASVDGASHWQKFRFITWPSMRSLYLTSTILSMIWTLGDFNSVYLLTG
GGPADLTHVLATLGIRYLRLDQVDLSLASIVVALPLVLPLVYFMMKRLSK
>Mature_289_residues
STITVDQVRPSAESASKGMTSWERWGMILVIPYLLIFLVFVIYPVGYGLWLAREPQTYVRLFADPIFFRTMVNSVVFIIV
SVNLKMIVALFLSGFFLNTRWWVKWLSLVFILPWAVPSIPTILSMRFMLNPEWGVINTLIFKLTGIDGPNWLNDPTLALS
FSMLAHIWKSLPFWTLILLAGRMAIPAEQYEAASVDGASHWQKFRFITWPSMRSLYLTSTILSMIWTLGDFNSVYLLTGG
GPADLTHVLATLGIRYLRLDQVDLSLASIVVALPLVLPLVYFMMKRLSK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=185, Percent_Identity=30.2702702702703, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790465, Length=202, Percent_Identity=30.6930693069307, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33036; Mature: 32905

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITVDQVRPSAESASKGMTSWERWGMILVIPYLLIFLVFVIYPVGYGLWLAREPQTYV
CCCEEHHCCCCCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH
RLFADPIFFRTMVNSVVFIIVSVNLKMIVALFLSGFFLNTRWWVKWLSLVFILPWAVPSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PTILSMRFMLNPEWGVINTLIFKLTGIDGPNWLNDPTLALSFSMLAHIWKSLPFWTLILL
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH
AGRMAIPAEQYEAASVDGASHWQKFRFITWPSMRSLYLTSTILSMIWTLGDFNSVYLLTG
HCCCCCCHHHHHHCCCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
GGPADLTHVLATLGIRYLRLDQVDLSLASIVVALPLVLPLVYFMMKRLSK
CCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STITVDQVRPSAESASKGMTSWERWGMILVIPYLLIFLVFVIYPVGYGLWLAREPQTYV
CCEEHHCCCCCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH
RLFADPIFFRTMVNSVVFIIVSVNLKMIVALFLSGFFLNTRWWVKWLSLVFILPWAVPSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PTILSMRFMLNPEWGVINTLIFKLTGIDGPNWLNDPTLALSFSMLAHIWKSLPFWTLILL
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH
AGRMAIPAEQYEAASVDGASHWQKFRFITWPSMRSLYLTSTILSMIWTLGDFNSVYLLTG
HCCCCCCHHHHHHCCCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
GGPADLTHVLATLGIRYLRLDQVDLSLASIVVALPLVLPLVYFMMKRLSK
CCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]