| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fdx4 [H]
Identifier: 91788628
GI number: 91788628
Start: 2909231
End: 2909584
Strand: Reverse
Name: fdx4 [H]
Synonym: Bpro_2766
Alternate gene names: 91788628
Gene position: 2909584-2909231 (Counterclockwise)
Preceding gene: 91788629
Following gene: 91788627
Centisome position: 55.95
GC content: 62.71
Gene sequence:
>354_bases ATGAGCGAAGCGGTGGTCAAACCCAAAATTGGCGCTTACAAACGCCATTTGCTGATCTGCACCGGCCCGCGCTGTACGCA GGATGGTGCGTCGCAGGAGCTGTTCGACAGCCTGGGCGACAAGTTCAAGGCGGCCGGGCTGCACGACGGTGAGATGCGCG TCAAGCGCAGCCGGGTGAGCTGCTTTGCCGCCTGCAAGGGCGGGCCGGTCATGTGCGTGCAGCCTGATGGCACCTGGTAT TACAACGTCACGCCCGCCAACATGGACCGCATCATTGACCAGCATCTGGTGGGCGGGCAGCCCGTGGCTGATCTGGTGTT CCATCAGGGTCCGGGGGACTGCCATGACGTTTGA
Upstream 100 bases:
>100_bases GCCACAAGCTGCCTGCGGACTACATCGAGGCAGTGCTGACCGCGCCGATTGAAGAAGAGGCCGTCAAGGAAGAAACGGCC AGTGCCGAGGAATCGGAAGC
Downstream 100 bases:
>100_bases GGCACAGGAGCACACCGGCCGCGGATTCGTGTCCATCGTGGGTGCAGGCCCGGGCCCGGTCGATTTGATGACGCTGCGGG CATTCGACCGGCTTCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: AaFd4 [H]
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVSCFAACKGGPVMCVQPDGTWY YNVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV
Sequences:
>Translated_117_residues MSEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVSCFAACKGGPVMCVQPDGTWY YNVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV >Mature_116_residues SEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVSCFAACKGGPVMCVQPDGTWYY NVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG3411
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002023 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01257 Complex1_24kDa [H]
EC number: NA
Molecular weight: Translated: 12718; Mature: 12586
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVS CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHHHHHHH CFAACKGGPVMCVQPDGTWYYNVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV EEEECCCCCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHEEECCCCCCCCC >Mature Secondary Structure SEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVS CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHHHHHHH CFAACKGGPVMCVQPDGTWYYNVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV EEEECCCCCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320; 10441520; 10884354; 12089152 [H]