Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is tar [C]

Identifier: 91788330

GI number: 91788330

Start: 2572262

End: 2573929

Strand: Direct

Name: tar [C]

Synonym: Bpro_2465

Alternate gene names: 91788330

Gene position: 2572262-2573929 (Clockwise)

Preceding gene: 91788329

Following gene: 91788331

Centisome position: 49.46

GC content: 62.89

Gene sequence:

>1668_bases
ATGAAGATTTCAACCAGACTCAGTCTTGCCGGAATATTCTCCGTTGGAGTCGTTGCGGTCATCGGCTTCGTGCTGCTGTC
CGCAACGCATCAGGTGAGGCAAGAACTCACCAAGAACGAGACAGCCGGCGAAATTCTCAATGCAGCTACCGCCGTCAGAT
ACCTCACACTGGAGTATGTGGCGAGTCATGAGGATCGCGTGCGTGCCCAATGGGAACTGAGGCACGCATCGCTATCGAAG
CTGCTCGCGGGCGCGACGGAATTCACCGGCCAGGAGGAACAGTCCATCATAGAAGACCTCCGTCACACGCATCAAGGTGT
CAACACCCTGTTCACCGAGCTCGCCGCGAACCAGCAAAACAGGGAAGCAGAGAAGGGGAAAGGCGCGATCCTCAAAGACC
TGGAGAGCCGGTTGACCGGCCAGATCATGAACAAGGCTCAGGCCATGATTTCCGGCGCGCTAAGCCTTTCCGACCGAAGC
CGGACGGGGGTCCTGGATGCGCAACAACGGACAAGCGCCGCGGTAGTGACGTTCGGCGGTGTCGTCGTGTTTGTCATTGC
GGCGACGCTGTTTCTGGCGCTTGGAAGCGTGACCCGGCCGCTTGAGAAGCTGCGCGAAGGCATTGCAATCGTGGGTGCAG
GCAATCTGGATCACCGGCTCGCCATCACTGCGAAGGACGAAATAGGGAGTCTGTCGCGCGCGTTCGACGAGATGACGGAA
AAGTTGAAGGCGACAACTGTATCGCGTGACGAACTGGGGCAAGGCAACGCAGTCTTGCAGGCCGAAGTCGCCGAGCGCAA
GCGGGTAGAAGAGAACCTTCGCCTGTTGATGCAGGAAACGCAGGAAATAGTGAATGTGCTTTCCTCTTTCTCCAGCGAAA
TCGTTGCCTCGACCACTCAACTTGCCGCCAGCGCCAGCCAGTCGGCTGCGGCGGTGACCGAGACCACCACCACGGTGGAG
GAGGTTCGGCAAACGGCGCAGGTGGCCAGCCAGAAGGCCAGGCTGGTGTCCGACAGCGCGCAGAAAGCGGCACAGAGCTC
CCAGAACGGGCGCAAGTCCACCGAGGATGTGGGTGCCGGCATGACCAGGATCCGTCAGCAGATGGAGGCGATTGCCGCCA
GCATGACGCGACTGTCCGAGCAGAGCCGGGCGATCGGGCGGATCATGGCGAGCGTGGAAGACCTGGCCGCCCAGTCGAAC
CTGCTGGCCGTCAATGCCGCCATCGAGGCGGCCAGGGCGGGCGAGCACGGCAAGGGCTTTGGCGTGGTAGCGCAGGAAGT
CAAAAGCCTGGCGGAGCAGTCGCGCCAGGCGACCACCCAGGTGCGTACCATCCTGGGGGACATCCAGAAGGCGACGATCG
CGGCGGTGCTGGCGACCGAGCAAGGCAGCAAGGCGGTGGAGGCGGGGAGCCGGCAGACCGAAGTGGCGGGCGAGTCCATC
CAGGCGCTGGCCGGCAGCGTGACGGAGGCGGTGCAGGCGGCCACGCAGATTGCGGCGTCGAGCCAGCAGCAACTGGCGGG
GGTGGACCAGGTGGCGGGCGCGATGGAGAGCATCAGGCAGGCGAGCACGCAAAACGTGGCAAGCGCCAGGCAGTTGGAGG
TTGCGGCGCGCAACCTGGATGAGCTGGGCCAGCGGCTCAAGCAGATGGCTGAGCGCTACAAGGTGTAA

Upstream 100 bases:

>100_bases
GCAGGCGTACACATGCCCAATTACCTGAATTACGTCTCCCTCGACGCGCTCAAGGCAGTGTCGCCGGCGGCGGTAACGGT
CATTCATTGAGGACGCCAAA

Downstream 100 bases:

>100_bases
TCAAAAAGGTCGTCATGAGCACCAAGGAAGACAACTTTCTCCTGCAACTCCGCGCGACCTTCAAGGTCGAAGCCGAAGAG
CATCTGCAGACGATCGCGGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MKISTRLSLAGIFSVGVVAVIGFVLLSATHQVRQELTKNETAGEILNAATAVRYLTLEYVASHEDRVRAQWELRHASLSK
LLAGATEFTGQEEQSIIEDLRHTHQGVNTLFTELAANQQNREAEKGKGAILKDLESRLTGQIMNKAQAMISGALSLSDRS
RTGVLDAQQRTSAAVVTFGGVVVFVIAATLFLALGSVTRPLEKLREGIAIVGAGNLDHRLAITAKDEIGSLSRAFDEMTE
KLKATTVSRDELGQGNAVLQAEVAERKRVEENLRLLMQETQEIVNVLSSFSSEIVASTTQLAASASQSAAAVTETTTTVE
EVRQTAQVASQKARLVSDSAQKAAQSSQNGRKSTEDVGAGMTRIRQQMEAIAASMTRLSEQSRAIGRIMASVEDLAAQSN
LLAVNAAIEAARAGEHGKGFGVVAQEVKSLAEQSRQATTQVRTILGDIQKATIAAVLATEQGSKAVEAGSRQTEVAGESI
QALAGSVTEAVQAATQIAASSQQQLAGVDQVAGAMESIRQASTQNVASARQLEVAARNLDELGQRLKQMAERYKV

Sequences:

>Translated_555_residues
MKISTRLSLAGIFSVGVVAVIGFVLLSATHQVRQELTKNETAGEILNAATAVRYLTLEYVASHEDRVRAQWELRHASLSK
LLAGATEFTGQEEQSIIEDLRHTHQGVNTLFTELAANQQNREAEKGKGAILKDLESRLTGQIMNKAQAMISGALSLSDRS
RTGVLDAQQRTSAAVVTFGGVVVFVIAATLFLALGSVTRPLEKLREGIAIVGAGNLDHRLAITAKDEIGSLSRAFDEMTE
KLKATTVSRDELGQGNAVLQAEVAERKRVEENLRLLMQETQEIVNVLSSFSSEIVASTTQLAASASQSAAAVTETTTTVE
EVRQTAQVASQKARLVSDSAQKAAQSSQNGRKSTEDVGAGMTRIRQQMEAIAASMTRLSEQSRAIGRIMASVEDLAAQSN
LLAVNAAIEAARAGEHGKGFGVVAQEVKSLAEQSRQATTQVRTILGDIQKATIAAVLATEQGSKAVEAGSRQTEVAGESI
QALAGSVTEAVQAATQIAASSQQQLAGVDQVAGAMESIRQASTQNVASARQLEVAARNLDELGQRLKQMAERYKV
>Mature_555_residues
MKISTRLSLAGIFSVGVVAVIGFVLLSATHQVRQELTKNETAGEILNAATAVRYLTLEYVASHEDRVRAQWELRHASLSK
LLAGATEFTGQEEQSIIEDLRHTHQGVNTLFTELAANQQNREAEKGKGAILKDLESRLTGQIMNKAQAMISGALSLSDRS
RTGVLDAQQRTSAAVVTFGGVVVFVIAATLFLALGSVTRPLEKLREGIAIVGAGNLDHRLAITAKDEIGSLSRAFDEMTE
KLKATTVSRDELGQGNAVLQAEVAERKRVEENLRLLMQETQEIVNVLSSFSSEIVASTTQLAASASQSAAAVTETTTTVE
EVRQTAQVASQKARLVSDSAQKAAQSSQNGRKSTEDVGAGMTRIRQQMEAIAASMTRLSEQSRAIGRIMASVEDLAAQSN
LLAVNAAIEAARAGEHGKGFGVVAQEVKSLAEQSRQATTQVRTILGDIQKATIAAVLATEQGSKAVEAGSRQTEVAGESI
QALAGSVTEAVQAATQIAASSQQQLAGVDQVAGAMESIRQASTQNVASARQLEVAARNLDELGQRLKQMAERYKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=326, Percent_Identity=27.9141104294479, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI2367378, Length=345, Percent_Identity=27.2463768115942, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1787690, Length=394, Percent_Identity=27.6649746192893, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1788194, Length=370, Percent_Identity=26.4864864864865, Blast_Score=108, Evalue=8e-25,
Organism=Escherichia coli, GI1789453, Length=381, Percent_Identity=27.2965879265092, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58971; Mature: 58971

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISTRLSLAGIFSVGVVAVIGFVLLSATHQVRQELTKNETAGEILNAATAVRYLTLEYV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ASHEDRVRAQWELRHASLSKLLAGATEFTGQEEQSIIEDLRHTHQGVNTLFTELAANQQN
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
REAEKGKGAILKDLESRLTGQIMNKAQAMISGALSLSDRSRTGVLDAQQRTSAAVVTFGG
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
VVVFVIAATLFLALGSVTRPLEKLREGIAIVGAGNLDHRLAITAKDEIGSLSRAFDEMTE
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHH
KLKATTVSRDELGQGNAVLQAEVAERKRVEENLRLLMQETQEIVNVLSSFSSEIVASTTQ
HHHHHHCCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASASQSAAAVTETTTTVEEVRQTAQVASQKARLVSDSAQKAAQSSQNGRKSTEDVGAG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
MTRIRQQMEAIAASMTRLSEQSRAIGRIMASVEDLAAQSNLLAVNAAIEAARAGEHGKGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCH
GVVAQEVKSLAEQSRQATTQVRTILGDIQKATIAAVLATEQGSKAVEAGSRQTEVAGESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHH
QALAGSVTEAVQAATQIAASSQQQLAGVDQVAGAMESIRQASTQNVASARQLEVAARNLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELGQRLKQMAERYKV
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISTRLSLAGIFSVGVVAVIGFVLLSATHQVRQELTKNETAGEILNAATAVRYLTLEYV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ASHEDRVRAQWELRHASLSKLLAGATEFTGQEEQSIIEDLRHTHQGVNTLFTELAANQQN
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
REAEKGKGAILKDLESRLTGQIMNKAQAMISGALSLSDRSRTGVLDAQQRTSAAVVTFGG
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
VVVFVIAATLFLALGSVTRPLEKLREGIAIVGAGNLDHRLAITAKDEIGSLSRAFDEMTE
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHH
KLKATTVSRDELGQGNAVLQAEVAERKRVEENLRLLMQETQEIVNVLSSFSSEIVASTTQ
HHHHHHCCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASASQSAAAVTETTTTVEEVRQTAQVASQKARLVSDSAQKAAQSSQNGRKSTEDVGAG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
MTRIRQQMEAIAASMTRLSEQSRAIGRIMASVEDLAAQSNLLAVNAAIEAARAGEHGKGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCH
GVVAQEVKSLAEQSRQATTQVRTILGDIQKATIAAVLATEQGSKAVEAGSRQTEVAGESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHH
QALAGSVTEAVQAATQIAASSQQQLAGVDQVAGAMESIRQASTQNVASARQLEVAARNLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELGQRLKQMAERYKV
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA