| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is frzE [H]
Identifier: 91788331
GI number: 91788331
Start: 2573944
End: 2576262
Strand: Direct
Name: frzE [H]
Synonym: Bpro_2466
Alternate gene names: 91788331
Gene position: 2573944-2576262 (Clockwise)
Preceding gene: 91788330
Following gene: 91788332
Centisome position: 49.5
GC content: 61.97
Gene sequence:
>2319_bases ATGAGCACCAAGGAAGACAACTTTCTCCTGCAACTCCGCGCGACCTTCAAGGTCGAAGCCGAAGAGCATCTGCAGACGAT CGCGGACGGTTTGCTGGAGCTGGAAAGCACGCCTTCCGCGCAGGCCAAAGGCCAGATCGTGGAGACGGTGTTCCGCGCCG CGCACAGTCTGAAGGGGGCGGCACGGGCGGTGGGTTTCTCCGAGATCGAGTTGCTGTGCCAGTCGATGGAAGACGTGTTT GCCAGCTGGAAGCGACAGGAAAGCCTGCCGTCGCCCGATGCACTCGACACACTGCATCGCGTACTCGATGCCATCGCCTC GGCGCAGGCCGCGCCCGTCGGTTCCGACGGCACCGGTGACCAGCCCGCCTTGTCGTCGTTGCGCCAGGCCTTGCGCCAGT TGGGAATCGACTCCTCTTTGAGTCCCCGGGAGTCCGCTGCTACCGGGCTGTCGTCCAGCGCCGACGACGCAGCGATGGCA CCGCCGGTGATCGAAGTTGCGAAGCCTGCTTTACCTTTACCGGTCGCGCCGGAAATCGGCCCCCAGGAAACAGTGCGCGT CACTGTCTCGAAACTGGAGGCGCGACTACTGGAGGCGGAGGAAATGCTCATGGCCAAACTGACCGTCGGCCAGCGGGTGA CCGATTTGCGCGAACTGTCTGGCCGCTTTGACGCCTGGCGCAATGCCTGGGGGGAGGTTGAGCCGGAAGCACGCCAGTTG CGCCTGCTATCCGATCAGCCGGGCTCCCCGACACAGCGGCATTCCTCCGAGGGGCTGGCCCAGGTGCTGGATTTCTTTGA CTGGAGCATGGACTACGTCAAAATCATGGAGAGCGAGGCCGTGGCACTGGAGCGGACGGCGCAGCACGACCGCTTTGCCA TTGGCAAACTGGTGGATGACCTGCTGGAGGATTCGAAGCAACTGCTCATGTTGCCGTTTGCCTCGATTTCGGCATCGTTC CAGAGGCTGGTGCGCGATTTGTGCCGCGATCAGGGCAAGGAGGCTGAGCTCAAGATCTACGGCGAAAACACCGAGATCGA CAAACGTATTCTGGAGGAGATGAAAGACCCGCTCATTCATTTGCTGCGCAACAGCCTGGATCATGGCATCGAAACCGCGG CCGAACGCAGGCGGCGCGGCAAACCATCGCGTGCGACGATCGAGCTGGCGGTGACCCAAATCAGCGGCAACAAAGTGCGG CTGATGCTGTCCGACAACGGCGCCGGCATCGATACCGGGAAGGTCAAAGCGTCGGCAATCAAGCTCGGGCTGATCTCGCC AGAAGAAGCGGCGCAGCTCAGCGAGCCTGAATCGCAGGCGCTGATTTTCCGCTCCGAAGTGTCTACCAGTCCGATCATCA CGCAGCTGTCGGGCCGCGGACTGGGACTGGCCATCGTGCGGGAGAAAACCACCAAACTGGGCGGGGAGGTAACGGTTGAC AGTCAGGCGGGCCTTGGAACCGTTTTCCAGATTGAATTGCCGGCGACGCGTGCAACCTTTCGCGGCATCCTGGTCAAAGC TGCCGGTCGGCTACTGGTGCTGCCGACCGCCCAGGTTGAGCGCGCCGCGCGCGCCACGCCCGACGACACCCGAACCGTCG AAGGGCGGGAGACCATCACGTTCGACGGGCGGGCTGTGTCCCTTGTGCGACTGGCCGACGTACTGGAATTGCCGTATGTT GAGCGCAAGGACATGTTCCCCAGCGGCATACCGGTACTCATTCTCGGCAGCGTCGACCAGCGTGTTGCATTCGCCGTGGA CGAGGTTCTGGATGAGCAGGAAATTTTAGTCAAGCCGCTGCTCAAGCCCCTGTCACGCGTGCGCAACGTCGCCGCCGCCG CAGTCCTCAGTAACGGCAAGATCGCAACCATACTCAATGTGGACGACCTGCTTAAATCTGCCAGAAAGGTCGCCCGCACG GCACCACGGGCAGCCACGGGAACGAAGGCGGTAGAGGCCGGGATGGTACTCATCGCCGAGGACTCCATCACCTCCCGGAT GCTACTCAAAAGTATCCTGGAATCCGCCGGCTACGACGTCAAAACAGCGGTGGACGGGATGGATGCGTTCACCCTGTTGC GCGCCGAAAAGTTCGACCTGCTTGTTTCCGATGTTGAAATGCCGCGGCTCAACGGCTTCGACCTGACGGCGAAGATACGC GCCGACAAAAGACTGGCCGAGCTTCCGGTGGTGCTGGTGACGGCGCTGGAAACGCGGGAGGACCGCGAGCGCGGCATCGA CGCTGGCGCCAATGCGTATATTGTCAAGAGCAGCTTCGACCAGAGCAACCTGATCGAGGCAGTACGGCGGCTGATTTAA
Upstream 100 bases:
>100_bases GCGCCAGGCAGTTGGAGGTTGCGGCGCGCAACCTGGATGAGCTGGGCCAGCGGCTCAAGCAGATGGCTGAGCGCTACAAG GTGTAATCAAAAAGGTCGTC
Downstream 100 bases:
>100_bases CCGGGTGAACCTTTCATGACCGATGGCAAGATCAACGTACTGGTGGCGGAAGACTCGGCGATCGCACGCGTGCTTCTCGT GCGCCTGCTCGAATCGGATC
Product: CheA signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 772; Mature: 771
Protein sequence:
>772_residues MSTKEDNFLLQLRATFKVEAEEHLQTIADGLLELESTPSAQAKGQIVETVFRAAHSLKGAARAVGFSEIELLCQSMEDVF ASWKRQESLPSPDALDTLHRVLDAIASAQAAPVGSDGTGDQPALSSLRQALRQLGIDSSLSPRESAATGLSSSADDAAMA PPVIEVAKPALPLPVAPEIGPQETVRVTVSKLEARLLEAEEMLMAKLTVGQRVTDLRELSGRFDAWRNAWGEVEPEARQL RLLSDQPGSPTQRHSSEGLAQVLDFFDWSMDYVKIMESEAVALERTAQHDRFAIGKLVDDLLEDSKQLLMLPFASISASF QRLVRDLCRDQGKEAELKIYGENTEIDKRILEEMKDPLIHLLRNSLDHGIETAAERRRRGKPSRATIELAVTQISGNKVR LMLSDNGAGIDTGKVKASAIKLGLISPEEAAQLSEPESQALIFRSEVSTSPIITQLSGRGLGLAIVREKTTKLGGEVTVD SQAGLGTVFQIELPATRATFRGILVKAAGRLLVLPTAQVERAARATPDDTRTVEGRETITFDGRAVSLVRLADVLELPYV ERKDMFPSGIPVLILGSVDQRVAFAVDEVLDEQEILVKPLLKPLSRVRNVAAAAVLSNGKIATILNVDDLLKSARKVART APRAATGTKAVEAGMVLIAEDSITSRMLLKSILESAGYDVKTAVDGMDAFTLLRAEKFDLLVSDVEMPRLNGFDLTAKIR ADKRLAELPVVLVTALETREDRERGIDAGANAYIVKSSFDQSNLIEAVRRLI
Sequences:
>Translated_772_residues MSTKEDNFLLQLRATFKVEAEEHLQTIADGLLELESTPSAQAKGQIVETVFRAAHSLKGAARAVGFSEIELLCQSMEDVF ASWKRQESLPSPDALDTLHRVLDAIASAQAAPVGSDGTGDQPALSSLRQALRQLGIDSSLSPRESAATGLSSSADDAAMA PPVIEVAKPALPLPVAPEIGPQETVRVTVSKLEARLLEAEEMLMAKLTVGQRVTDLRELSGRFDAWRNAWGEVEPEARQL RLLSDQPGSPTQRHSSEGLAQVLDFFDWSMDYVKIMESEAVALERTAQHDRFAIGKLVDDLLEDSKQLLMLPFASISASF QRLVRDLCRDQGKEAELKIYGENTEIDKRILEEMKDPLIHLLRNSLDHGIETAAERRRRGKPSRATIELAVTQISGNKVR LMLSDNGAGIDTGKVKASAIKLGLISPEEAAQLSEPESQALIFRSEVSTSPIITQLSGRGLGLAIVREKTTKLGGEVTVD SQAGLGTVFQIELPATRATFRGILVKAAGRLLVLPTAQVERAARATPDDTRTVEGRETITFDGRAVSLVRLADVLELPYV ERKDMFPSGIPVLILGSVDQRVAFAVDEVLDEQEILVKPLLKPLSRVRNVAAAAVLSNGKIATILNVDDLLKSARKVART APRAATGTKAVEAGMVLIAEDSITSRMLLKSILESAGYDVKTAVDGMDAFTLLRAEKFDLLVSDVEMPRLNGFDLTAKIR ADKRLAELPVVLVTALETREDRERGIDAGANAYIVKSSFDQSNLIEAVRRLI >Mature_771_residues STKEDNFLLQLRATFKVEAEEHLQTIADGLLELESTPSAQAKGQIVETVFRAAHSLKGAARAVGFSEIELLCQSMEDVFA SWKRQESLPSPDALDTLHRVLDAIASAQAAPVGSDGTGDQPALSSLRQALRQLGIDSSLSPRESAATGLSSSADDAAMAP PVIEVAKPALPLPVAPEIGPQETVRVTVSKLEARLLEAEEMLMAKLTVGQRVTDLRELSGRFDAWRNAWGEVEPEARQLR LLSDQPGSPTQRHSSEGLAQVLDFFDWSMDYVKIMESEAVALERTAQHDRFAIGKLVDDLLEDSKQLLMLPFASISASFQ RLVRDLCRDQGKEAELKIYGENTEIDKRILEEMKDPLIHLLRNSLDHGIETAAERRRRGKPSRATIELAVTQISGNKVRL MLSDNGAGIDTGKVKASAIKLGLISPEEAAQLSEPESQALIFRSEVSTSPIITQLSGRGLGLAIVREKTTKLGGEVTVDS QAGLGTVFQIELPATRATFRGILVKAAGRLLVLPTAQVERAARATPDDTRTVEGRETITFDGRAVSLVRLADVLELPYVE RKDMFPSGIPVLILGSVDQRVAFAVDEVLDEQEILVKPLLKPLSRVRNVAAAAVLSNGKIATILNVDDLLKSARKVARTA PRAATGTKAVEAGMVLIAEDSITSRMLLKSILESAGYDVKTAVDGMDAFTLLRAEKFDLLVSDVEMPRLNGFDLTAKIRA DKRLAELPVVLVTALETREDRERGIDAGANAYIVKSSFDQSNLIEAVRRLI
Specific function: FrzE is involved in a sensory transduction pathway that controls the frequency at which cells reverse their gliding direction. FrzE seems to be capable of autophosphorylating itself on an histidine residue and then to transfer that group to an aspartate r
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=678, Percent_Identity=27.5811209439528, Blast_Score=195, Evalue=1e-50, Organism=Escherichia coli, GI1788713, Length=140, Percent_Identity=34.2857142857143, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI145693157, Length=102, Percent_Identity=38.2352941176471, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=34.1880341880342, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1786784, Length=117, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI87082012, Length=114, Percent_Identity=32.4561403508772, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790863, Length=101, Percent_Identity=33.6633663366337, Blast_Score=63, Evalue=7e-11, Organism=Escherichia coli, GI1787487, Length=121, Percent_Identity=33.8842975206612, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR005467 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF02518 HATPase_c; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 83870; Mature: 83739
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKEDNFLLQLRATFKVEAEEHLQTIADGLLELESTPSAQAKGQIVETVFRAAHSLKGA CCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ARAVGFSEIELLCQSMEDVFASWKRQESLPSPDALDTLHRVLDAIASAQAAPVGSDGTGD HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC QPALSSLRQALRQLGIDSSLSPRESAATGLSSSADDAAMAPPVIEVAKPALPLPVAPEIG CHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC PQETVRVTVSKLEARLLEAEEMLMAKLTVGQRVTDLRELSGRFDAWRNAWGEVEPEARQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RLLSDQPGSPTQRHSSEGLAQVLDFFDWSMDYVKIMESEAVALERTAQHDRFAIGKLVDD EECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LLEDSKQLLMLPFASISASFQRLVRDLCRDQGKEAELKIYGENTEIDKRILEEMKDPLIH HHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH LLRNSLDHGIETAAERRRRGKPSRATIELAVTQISGNKVRLMLSDNGAGIDTGKVKASAI HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEEEE KLGLISPEEAAQLSEPESQALIFRSEVSTSPIITQLSGRGLGLAIVREKTTKLGGEVTVD EEECCCCHHHHHCCCCCHHEEEEECCCCCCCHHEEECCCCCEEEEEEHHHHHCCCEEEEC SQAGLGTVFQIELPATRATFRGILVKAAGRLLVLPTAQVERAARATPDDTRTVEGRETIT CCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCEECCCEEEE FDGRAVSLVRLADVLELPYVERKDMFPSGIPVLILGSVDQRVAFAVDEVLDEQEILVKPL ECCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHHHHHH LKPLSRVRNVAAAAVLSNGKIATILNVDDLLKSARKVARTAPRAATGTKAVEAGMVLIAE HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEC DSITSRMLLKSILESAGYDVKTAVDGMDAFTLLRAEKFDLLVSDVEMPRLNGFDLTAKIR CCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC ADKRLAELPVVLVTALETREDRERGIDAGANAYIVKSSFDQSNLIEAVRRLI CCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHC >Mature Secondary Structure STKEDNFLLQLRATFKVEAEEHLQTIADGLLELESTPSAQAKGQIVETVFRAAHSLKGA CCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ARAVGFSEIELLCQSMEDVFASWKRQESLPSPDALDTLHRVLDAIASAQAAPVGSDGTGD HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC QPALSSLRQALRQLGIDSSLSPRESAATGLSSSADDAAMAPPVIEVAKPALPLPVAPEIG CHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC PQETVRVTVSKLEARLLEAEEMLMAKLTVGQRVTDLRELSGRFDAWRNAWGEVEPEARQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RLLSDQPGSPTQRHSSEGLAQVLDFFDWSMDYVKIMESEAVALERTAQHDRFAIGKLVDD EECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LLEDSKQLLMLPFASISASFQRLVRDLCRDQGKEAELKIYGENTEIDKRILEEMKDPLIH HHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH LLRNSLDHGIETAAERRRRGKPSRATIELAVTQISGNKVRLMLSDNGAGIDTGKVKASAI HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEEEE KLGLISPEEAAQLSEPESQALIFRSEVSTSPIITQLSGRGLGLAIVREKTTKLGGEVTVD EEECCCCHHHHHCCCCCHHEEEEECCCCCCCHHEEECCCCCEEEEEEHHHHHCCCEEEEC SQAGLGTVFQIELPATRATFRGILVKAAGRLLVLPTAQVERAARATPDDTRTVEGRETIT CCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCEECCCEEEE FDGRAVSLVRLADVLELPYVERKDMFPSGIPVLILGSVDQRVAFAVDEVLDEQEILVKPL ECCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHHHHHH LKPLSRVRNVAAAAVLSNGKIATILNVDDLLKSARKVARTAPRAATGTKAVEAGMVLIAE HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEC DSITSRMLLKSILESAGYDVKTAVDGMDAFTLLRAEKFDLLVSDVEMPRLNGFDLTAKIR CCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC ADKRLAELPVVLVTALETREDRERGIDAGANAYIVKSSFDQSNLIEAVRRLI CCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2165608; 2123853 [H]