Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787998

Identifier: 91787998

GI number: 91787998

Start: 2215770

End: 2216864

Strand: Reverse

Name: 91787998

Synonym: Bpro_2125

Alternate gene names: NA

Gene position: 2216864-2215770 (Counterclockwise)

Preceding gene: 91787999

Following gene: 91787997

Centisome position: 42.63

GC content: 64.38

Gene sequence:

>1095_bases
ATGGACATGACACCTCCCCCCAAACCAGGCCAGCCGGCCCGCGCCGACAACGCGGCGCGCAAGGCCTTCTATGACGCCAT
CTCGTCCCACAGCATGACGCCGCTGTGGGAGGTGCTGCACGCGCTGGTGCCACCGTCCCCCACGACGCCATGCCAGCCCG
CGCTCTGGAAATACGCCGAGGTACACCCGTTCCTGATGCAGGCGGGCCAGCTTATCACCGCCGAAGAGGCGGTGCGCCGG
GTGCTGATCCTGGAAAACCCCGGCCTGCGCGGGCAGTCTTGCGTGACCCAGTCGCTTTATGCCGGCCTGCAGGTCATCAT
GCCGGGCGAAGTCGCGCCCAGCCACCGGCACACGCAAAGCGCACTGCGCTTTGTCGTCGAAGGCCAGGGCGCCTACACCG
CGGTAGACGGCGAGCGCACACAGATGAAGCCAGGCGATTTCATCATCACCCCGAGCTGGACATGGCACGACCATGGCCAC
CCCGGCCATGTGGAATCGGATGCACCCGTGGTCTGGCTGGATGGCCTGGACATCCCCATGCTGCGCTTCTTTGACGCCGG
CTTTGCGGAAAACGGCAGCGCCAAACAGCAAGCCGTGACCAAGGCTGAAGGCATCAGCTACCAGCGCTACGGCGCCAACA
TGCTGCCGGTGCGCTACGACGCGCCCTTTGGCCAGACCTCTCCGATCTTCAGCTACCCCTATGAGCGCACACGCGAGGCC
CTGCACCAGCTGGAAGCCCATGCCGAGATCGATGCCTGGGACGGCACCAAGCTGCGCTATGTCAATCCGGCCACGGGCGG
CTCGCCCATGCCGACCATGGCCACCTTCATGCAGCGCCTGCCGGCGGGCTTTGAAGGCAAGCCCTGGCGCCAGACCGATG
GGGCCGTATTCAGCGTGGTGGAAGGCCACGGCAGCGTCACCATCGAGCGCAATGGCCAATCCTGGACATTCGACTTTGGC
CCGCGCGACCATTTTGTGATTCCGTCGTGGCACACTGCCCAACTGCACTCGCAGCAAGGTTGTGTGCTGTTCAGTTTTTC
AGACCGCCCGGTGCATCAGGCCTTGGGCATACACAAAGAGGAAAGGTTGTCATGA

Upstream 100 bases:

>100_bases
CAACTGCTCAGGCAGGACGGCGTTTACCTCGACGAAAGCGCCGACTGAGCGGCCATCGGCCAGAGAGTCAACAGGATTAA
ATCAGCGGCGGAACCCCCTC

Downstream 100 bases:

>100_bases
GTTTTGTATTTACCCCGCCCGCCACGGTTTCCGTACCCGTTGTGGGAGTCAAAGAACGCTTTCCCGTCCACCGCATTTAC
TGCGTGGGCCGCAACTACGA

Product: gentisate 1,2-dioxygenase

Products: maleylpyruvate

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Gentisate 1 2-Dioxygenase Oxidoreductase; Cupin 2 Conserved Barrel Domain-Containing Protein; 1 2-Dioxygenase; Dioxygenase Oxidoreductase Protein; Gentisate 1 2-Dioxygenase Oxidoreductase Protein; Dioxygenase; Cupin 2 Protein; 1-Hydroxy-2-Naphthoate Dioxygenase

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAEVHPFLMQAGQLITAEEAVRR
VLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQSALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGH
PGHVESDAPVVWLDGLDIPMLRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA
LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVVEGHGSVTIERNGQSWTFDFG
PRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKEERLS

Sequences:

>Translated_364_residues
MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAEVHPFLMQAGQLITAEEAVRR
VLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQSALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGH
PGHVESDAPVVWLDGLDIPMLRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA
LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVVEGHGSVTIERNGQSWTFDFG
PRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKEERLS
>Mature_364_residues
MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAEVHPFLMQAGQLITAEEAVRR
VLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQSALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGH
PGHVESDAPVVWLDGLDIPMLRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA
LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVVEGHGSVTIERNGQSWTFDFG
PRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKEERLS

Specific function: Unknown

COG id: COG3435

COG function: function code Q; Gentisate 1,2-dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.13.11.4

Molecular weight: Translated: 40332; Mature: 40332

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
VHPFLMQAGQLITAEEAVRRVLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQS
CCHHHHHCCCEEEHHHHHCEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHH
ALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGHPGHVESDAPVVWLDGLDIPM
HHEEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHH
LRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA
HHHHCCCCCCCCCHHHHHHHHHHCCEEHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHH
LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVV
HHHHHHCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
EGHGSVTIERNGQSWTFDFGPRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKE
ECCCEEEEEECCCEEEEECCCCCCEEECCCCHHHHHCCCCEEEEEECCCCHHHHHCCCHH
ERLS
HHCC
>Mature Secondary Structure
MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
VHPFLMQAGQLITAEEAVRRVLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQS
CCHHHHHCCCEEEHHHHHCEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHH
ALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGHPGHVESDAPVVWLDGLDIPM
HHEEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHH
LRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA
HHHHCCCCCCCCCHHHHHHHHHHCCEEHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHH
LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVV
HHHHHHCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
EGHGSVTIERNGQSWTFDFGPRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKE
ECCCEEEEEECCCEEEEECCCCCCEEECCCCHHHHHCCCCEEEEEECCCCHHHHHCCCHH
ERLS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2,5-dihydroxybenzoate; O2

Specific reaction: 2,5-dihydroxybenzoate + O2 = maleylpyruvate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA