Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is gbh [H]

Identifier: 91787901

GI number: 91787901

Start: 2095769

End: 2096830

Strand: Direct

Name: gbh [H]

Synonym: Bpro_2025

Alternate gene names: 91787901

Gene position: 2095769-2096830 (Clockwise)

Preceding gene: 91787900

Following gene: 91787902

Centisome position: 40.3

GC content: 65.35

Gene sequence:

>1062_bases
ATGACTACCAACGCAGAACATTTGGCCAGGTTGCGGGCCCGTTATGCCGGCGCTTCGGGCGCCGACATGTTTGACCCGGC
ATTCAAGGCCGTCGCTGAACAGATCTTCAGCAGCTCGGACCGCCGCAAGTGGCCGTTTGCCGACGTCCCCACATTTCTCG
ATGCCCCTTATCGCGCGGATGGCTTGGCCCAGCCCGAGCCGAATCTGGCGGGCCTCGATGTGGCCTTGATCGGCGTGCCG
ATGGACCTGGGCGTGACCAACCGCGCCGGGGCCCGCCTGGGGCCGCGGGCCGTGCGCAATGTGGAGCGTATCGGGCCTTA
CGAGCATGCGCTGGGCCTGGCGCCGGTGACCCGCTTGAAGATGGCTGACGTGGGCGATGTGCCCATGCGCAGCCGTTTCA
GCCTGGACGAATGCCATGCCGACATCGAGGCCTGCTTCAACCAGGTTGTGAACGCGGGTGTGATTCCGCTGGCTGTGGGC
GGTGACCATTCGATCACGGGCTCCATCCTGAAAGCGGTGGGACGCGACCGGCCGGTGGGCATGGTGCATATTGATGCCCA
CTGTGACACCGCCGGAACCTACGAGGGCTCCAAATTTCACCACGGCGGGCCCTTTCGGGAAGCGGTGCTGGCCGGCGTGC
TGGATCCGCGCCGCTGCATCCAGATTGGCATTCGGGGCGGGGCCGAGTATTTGTGGGAGTTTTCGTTTGACTCCGGAATG
ACCGTCATCCATGCCGAAGAGTTCTCCAAAATGGGCGTGGAAGCCGTGATCCGGCGCGCCCGCGAAGTGGTGGGCGACGG
CCCGACCTATGTGACGTTTGACGTGGACAGCCTGGACCCCGCGTATGCGCCGGGCACGGGCACGCCCGAGGTCGGCGGCC
TGAGCCCGCGCGAAGTGCTCACCTTGCTGCGCGGCCTGGCGGGCCTGAACATTGTCGGCGGTGACGTGATGGAGGTCGCT
CCACAGAACGACCCCTCCGGCAACACGGCCCTGGTGGGCGCGCAGATGCTGTTCGAGATACTGTGCCTGGTTGCATTGTC
GCCAGCCATGGCGAACCGATAA

Upstream 100 bases:

>100_bases
CGCGGCTGTGCCTGGACCGGCTGTCGCGCGGCAGCGCGGCGCCGCAGGCGTGAGCGGCGGCAGCCCGATTTTTTCCAACA
TGAACCATTCCATGCATTCC

Downstream 100 bases:

>100_bases
GCGGCTAGGCGTCACCTCCTTATTTATTTCTATTTCTATTTCTCTTTCTCTTTCTCTTTACTCTTTACTCTTTACTCTTC
AGGAACATCATGACCATCCA

Product: agmatinase

Products: NA

Alternate protein names: GBase; D-arginase [H]

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTTNAEHLARLRARYAGASGADMFDPAFKAVAEQIFSSSDRRKWPFADVPTFLDAPYRADGLAQPEPNLAGLDVALIGVP
MDLGVTNRAGARLGPRAVRNVERIGPYEHALGLAPVTRLKMADVGDVPMRSRFSLDECHADIEACFNQVVNAGVIPLAVG
GDHSITGSILKAVGRDRPVGMVHIDAHCDTAGTYEGSKFHHGGPFREAVLAGVLDPRRCIQIGIRGGAEYLWEFSFDSGM
TVIHAEEFSKMGVEAVIRRAREVVGDGPTYVTFDVDSLDPAYAPGTGTPEVGGLSPREVLTLLRGLAGLNIVGGDVMEVA
PQNDPSGNTALVGAQMLFEILCLVALSPAMANR

Sequences:

>Translated_353_residues
MTTNAEHLARLRARYAGASGADMFDPAFKAVAEQIFSSSDRRKWPFADVPTFLDAPYRADGLAQPEPNLAGLDVALIGVP
MDLGVTNRAGARLGPRAVRNVERIGPYEHALGLAPVTRLKMADVGDVPMRSRFSLDECHADIEACFNQVVNAGVIPLAVG
GDHSITGSILKAVGRDRPVGMVHIDAHCDTAGTYEGSKFHHGGPFREAVLAGVLDPRRCIQIGIRGGAEYLWEFSFDSGM
TVIHAEEFSKMGVEAVIRRAREVVGDGPTYVTFDVDSLDPAYAPGTGTPEVGGLSPREVLTLLRGLAGLNIVGGDVMEVA
PQNDPSGNTALVGAQMLFEILCLVALSPAMANR
>Mature_352_residues
TTNAEHLARLRARYAGASGADMFDPAFKAVAEQIFSSSDRRKWPFADVPTFLDAPYRADGLAQPEPNLAGLDVALIGVPM
DLGVTNRAGARLGPRAVRNVERIGPYEHALGLAPVTRLKMADVGDVPMRSRFSLDECHADIEACFNQVVNAGVIPLAVGG
DHSITGSILKAVGRDRPVGMVHIDAHCDTAGTYEGSKFHHGGPFREAVLAGVLDPRRCIQIGIRGGAEYLWEFSFDSGMT
VIHAEEFSKMGVEAVIRRAREVVGDGPTYVTFDVDSLDPAYAPGTGTPEVGGLSPREVLTLLRGLAGLNIVGGDVMEVAP
QNDPSGNTALVGAQMLFEILCLVALSPAMANR

Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family. Agmatinase subfamily [H]

Homologues:

Organism=Homo sapiens, GI37537722, Length=276, Percent_Identity=44.9275362318841, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI10947139, Length=303, Percent_Identity=25.7425742574257, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI4502215, Length=297, Percent_Identity=25.2525252525253, Blast_Score=72, Evalue=8e-13,
Organism=Escherichia coli, GI1789306, Length=265, Percent_Identity=39.622641509434, Blast_Score=175, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6325146, Length=199, Percent_Identity=35.1758793969849, Blast_Score=83, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005925
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.7; =3.5.3.10 [H]

Molecular weight: Translated: 37530; Mature: 37399

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNAEHLARLRARYAGASGADMFDPAFKAVAEQIFSSSDRRKWPFADVPTFLDAPYRAD
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCC
GLAQPEPNLAGLDVALIGVPMDLGVTNRAGARLGPRAVRNVERIGPYEHALGLAPVTRLK
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHH
MADVGDVPMRSRFSLDECHADIEACFNQVVNAGVIPLAVGGDHSITGSILKAVGRDRPVG
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCE
MVHIDAHCDTAGTYEGSKFHHGGPFREAVLAGVLDPRRCIQIGIRGGAEYLWEFSFDSGM
EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCC
TVIHAEEFSKMGVEAVIRRAREVVGDGPTYVTFDVDSLDPAYAPGTGTPEVGGLSPREVL
EEEEHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
TLLRGLAGLNIVGGDVMEVAPQNDPSGNTALVGAQMLFEILCLVALSPAMANR
HHHHHHHCCEEECCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure 
TTNAEHLARLRARYAGASGADMFDPAFKAVAEQIFSSSDRRKWPFADVPTFLDAPYRAD
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCC
GLAQPEPNLAGLDVALIGVPMDLGVTNRAGARLGPRAVRNVERIGPYEHALGLAPVTRLK
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHH
MADVGDVPMRSRFSLDECHADIEACFNQVVNAGVIPLAVGGDHSITGSILKAVGRDRPVG
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCE
MVHIDAHCDTAGTYEGSKFHHGGPFREAVLAGVLDPRRCIQIGIRGGAEYLWEFSFDSGM
EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCC
TVIHAEEFSKMGVEAVIRRAREVVGDGPTYVTFDVDSLDPAYAPGTGTPEVGGLSPREVL
EEEEHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
TLLRGLAGLNIVGGDVMEVAPQNDPSGNTALVGAQMLFEILCLVALSPAMANR
HHHHHHHCCEEECCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA