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The map label for this gene is yoaB [C]

Identifier: 91787902

GI number: 91787902

Start: 2096920

End: 2097276

Strand: Direct

Name: yoaB [C]

Synonym: Bpro_2026

Alternate gene names: 91787902

Gene position: 2096920-2097276 (Clockwise)

Preceding gene: 91787901

Following gene: 91787903

Centisome position: 40.32

GC content: 68.07

Gene sequence:

>357_bases
ATGACCATCCAGCGCATTGAAACCGGCCCCCGCATGTCGCAAGCCGTTGTGCACCAGAAAACCGTTTACCTCGCCGGCCA
GGTAGCCGACCACGATGCCGGGCCCAGCGTCTACACCCAGACGCAGCAGGCCCTGGCGAGCATCGACCGCCTGCTGGCCG
CTGCCGGCAGCGACAAGACCCGCATACTGAGCGCCACCATCTGGCTGACCGACATGGACACCTTTGCCGACATGAACCGT
GCCTGGGAGGCCTGGGTCGTGCCCGGCAGCACCCCGGCACGCGCCACCGTGCACAGCGCCCGCCTGGCCGCGCAGGAATA
CCGGGTGGAGATCGGCGTGATTGCGGCGCAGGCCTGA

Upstream 100 bases:

>100_bases
CGAACCGATAAGCGGCTAGGCGTCACCTCCTTATTTATTTCTATTTCTATTTCTCTTTCTCTTTCTCTTTACTCTTTACT
CTTTACTCTTCAGGAACATC

Downstream 100 bases:

>100_bases
TTCTTTGTCCGGAATGCCGGCCGCCATGCCGGGTTGAGTCCCGTGGCGATGGCTCCAAAACGCCAGGCCCCAAGGCCGGG
AGCGCTGTGCGGACCGCCCA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTIQRIETGPRMSQAVVHQKTVYLAGQVADHDAGPSVYTQTQQALASIDRLLAAAGSDKTRILSATIWLTDMDTFADMNR
AWEAWVVPGSTPARATVHSARLAAQEYRVEIGVIAAQA

Sequences:

>Translated_118_residues
MTIQRIETGPRMSQAVVHQKTVYLAGQVADHDAGPSVYTQTQQALASIDRLLAAAGSDKTRILSATIWLTDMDTFADMNR
AWEAWVVPGSTPARATVHSARLAAQEYRVEIGVIAAQA
>Mature_117_residues
TIQRIETGPRMSQAVVHQKTVYLAGQVADHDAGPSVYTQTQQALASIDRLLAAAGSDKTRILSATIWLTDMDTFADMNRA
WEAWVVPGSTPARATVHSARLAAQEYRVEIGVIAAQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=116, Percent_Identity=46.551724137931, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12766; Mature: 12634

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQRIETGPRMSQAVVHQKTVYLAGQVADHDAGPSVYTQTQQALASIDRLLAAAGSDKT
CCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RILSATIWLTDMDTFADMNRAWEAWVVPGSTPARATVHSARLAAQEYRVEIGVIAAQA
EEEEEEEEEECCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEEEECC
>Mature Secondary Structure 
TIQRIETGPRMSQAVVHQKTVYLAGQVADHDAGPSVYTQTQQALASIDRLLAAAGSDKT
CCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RILSATIWLTDMDTFADMNRAWEAWVVPGSTPARATVHSARLAAQEYRVEIGVIAAQA
EEEEEEEEEECCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]