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The map label for this gene is ocd2 [H]

Identifier: 91787900

GI number: 91787900

Start: 2094723

End: 2095721

Strand: Direct

Name: ocd2 [H]

Synonym: Bpro_2024

Alternate gene names: 91787900

Gene position: 2094723-2095721 (Clockwise)

Preceding gene: 91787899

Following gene: 91787901

Centisome position: 40.28

GC content: 68.57

Gene sequence:

>999_bases
ATGGAAAATTCTGCAACCACGATTTCCCCGGTTTTTGTCGATGCCGCCAGTGTGGCCAGCCACTTGCCCTGGCCGGAACT
GCTGCAGGCCCTGCACAGCGCCTTTGCCGCGACTGACCTGAGCACGCCCACGCGGGGCCATTACCACATGGAGGGCATGG
GCAGCGCCGGCACACCGGTGTTGCTTTCCATGCCGGCCTGGAGCCCCGGTTTGGGGGTGGGGGTCAAGCTGGTGGCGGTT
TATCCCGATAACGCCATCCTCAATTTGCCATCCATTCACGGGCTTTACGTGTTGATGGAGGGCGCCAGCGGCCGTCCGCA
GGCGGTGCTGGACGCTGGCGAGCTGACGGCGCGCCGCACGGCGGCGGCCTCGGCCCTGGCCAGCCGGTTTCTCTCGCGCC
CCGACAGCCGCACGCTACTGATGGTCGGGACGGGGCGACTGTCGCAGTACCTGCCCCTGGCCCATGCCCAGGTGCGACCG
ATTGAGCGCGTGCTGGTGTGGGGCAGGTCACCGGCCAAGGCGCAGGAGAGTGCGGACGCCTTGCGGGCGCAGGGCGTGAA
TGCAGAACCTGTCACCGCGCTGGAAGAGGCTAGCGCGCAGGCCGACATCATCAGCTGCGCCACGCTGTCGAAAACCTCGC
TGTTGCGCGGTGAGTGGCTGCGTCCCGGCACGCATGTGGACCTGGTTGGCGCCTTCACGCCGCAGATGCGCGAGGCCGAT
GACCAGGTGTTCCTGCGCGCAGCCTCGGTCTGGTGCGACACCACCGCCGGCGGCCTGGCGGAGGCGGGCGACTTGATCCA
GGCGCTGGCGTCCGGTGCCCTGGTGCGCAACCGTATTCGGGGCGAGTTGGCTGACCTGTGCCGGGCGGGCGCACCCATTG
CGCGCCGCGACACCGATATCACCGTCTTCAAATCCGTCGGAGCGGCACTTGAAGACCTTGCCGCTGCGCGGCTGTGCCTG
GACCGGCTGTCGCGCGGCAGCGCGGCGCCGCAGGCGTGA

Upstream 100 bases:

>100_bases
GCGATGCCCAGTTTCAAAGCGCGCGCTGCGGGCAGCGTGTGAATGTGCTGATCGATGCCGAACGCTGTTCGGTGTTCGCG
ACTTGAGCGGGGAGGGCGCC

Downstream 100 bases:

>100_bases
GCGGCGGCAGCCCGATTTTTTCCAACATGAACCATTCCATGCATTCCATGACTACCAACGCAGAACATTTGGCCAGGTTG
CGGGCCCGTTATGCCGGCGC

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MENSATTISPVFVDAASVASHLPWPELLQALHSAFAATDLSTPTRGHYHMEGMGSAGTPVLLSMPAWSPGLGVGVKLVAV
YPDNAILNLPSIHGLYVLMEGASGRPQAVLDAGELTARRTAAASALASRFLSRPDSRTLLMVGTGRLSQYLPLAHAQVRP
IERVLVWGRSPAKAQESADALRAQGVNAEPVTALEEASAQADIISCATLSKTSLLRGEWLRPGTHVDLVGAFTPQMREAD
DQVFLRAASVWCDTTAGGLAEAGDLIQALASGALVRNRIRGELADLCRAGAPIARRDTDITVFKSVGAALEDLAAARLCL
DRLSRGSAAPQA

Sequences:

>Translated_332_residues
MENSATTISPVFVDAASVASHLPWPELLQALHSAFAATDLSTPTRGHYHMEGMGSAGTPVLLSMPAWSPGLGVGVKLVAV
YPDNAILNLPSIHGLYVLMEGASGRPQAVLDAGELTARRTAAASALASRFLSRPDSRTLLMVGTGRLSQYLPLAHAQVRP
IERVLVWGRSPAKAQESADALRAQGVNAEPVTALEEASAQADIISCATLSKTSLLRGEWLRPGTHVDLVGAFTPQMREAD
DQVFLRAASVWCDTTAGGLAEAGDLIQALASGALVRNRIRGELADLCRAGAPIARRDTDITVFKSVGAALEDLAAARLCL
DRLSRGSAAPQA
>Mature_332_residues
MENSATTISPVFVDAASVASHLPWPELLQALHSAFAATDLSTPTRGHYHMEGMGSAGTPVLLSMPAWSPGLGVGVKLVAV
YPDNAILNLPSIHGLYVLMEGASGRPQAVLDAGELTARRTAAASALASRFLSRPDSRTLLMVGTGRLSQYLPLAHAQVRP
IERVLVWGRSPAKAQESADALRAQGVNAEPVTALEEASAQADIISCATLSKTSLLRGEWLRPGTHVDLVGAFTPQMREAD
DQVFLRAASVWCDTTAGGLAEAGDLIQALASGALVRNRIRGELADLCRAGAPIARRDTDITVFKSVGAALEDLAAARLCL
DRLSRGSAAPQA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=266, Percent_Identity=34.9624060150376, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI4503065, Length=265, Percent_Identity=35.0943396226415, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24642678, Length=356, Percent_Identity=26.4044943820225, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34812; Mature: 34812

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSATTISPVFVDAASVASHLPWPELLQALHSAFAATDLSTPTRGHYHMEGMGSAGTPV
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCE
LLSMPAWSPGLGVGVKLVAVYPDNAILNLPSIHGLYVLMEGASGRPQAVLDAGELTARRT
EEECCCCCCCCCCCEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCEEEEHHHHHHHHH
AAASALASRFLSRPDSRTLLMVGTGRLSQYLPLAHAQVRPIERVLVWGRSPAKAQESADA
HHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHEECCCCCHHHHHHHH
LRAQGVNAEPVTALEEASAQADIISCATLSKTSLLRGEWLRPGTHVDLVGAFTPQMREAD
HHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHCCH
DQVFLRAASVWCDTTAGGLAEAGDLIQALASGALVRNRIRGELADLCRAGAPIARRDTDI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
TVFKSVGAALEDLAAARLCLDRLSRGSAAPQA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MENSATTISPVFVDAASVASHLPWPELLQALHSAFAATDLSTPTRGHYHMEGMGSAGTPV
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCE
LLSMPAWSPGLGVGVKLVAVYPDNAILNLPSIHGLYVLMEGASGRPQAVLDAGELTARRT
EEECCCCCCCCCCCEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCEEEEHHHHHHHHH
AAASALASRFLSRPDSRTLLMVGTGRLSQYLPLAHAQVRPIERVLVWGRSPAKAQESADA
HHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHEECCCCCHHHHHHHH
LRAQGVNAEPVTALEEASAQADIISCATLSKTSLLRGEWLRPGTHVDLVGAFTPQMREAD
HHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHCCH
DQVFLRAASVWCDTTAGGLAEAGDLIQALASGALVRNRIRGELADLCRAGAPIARRDTDI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
TVFKSVGAALEDLAAARLCLDRLSRGSAAPQA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]