Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787552

Identifier: 91787552

GI number: 91787552

Start: 1724087

End: 1724854

Strand: Reverse

Name: 91787552

Synonym: Bpro_1670

Alternate gene names: NA

Gene position: 1724854-1724087 (Counterclockwise)

Preceding gene: 91787553

Following gene: 91787551

Centisome position: 33.17

GC content: 69.27

Gene sequence:

>768_bases
ATGGAATTCGGCACCCTCAGACCGCTGCTGGCCAGCCTGGCTTTGCCACCCGTGGCGCCTTTGCTGCTCGCCTTGCTCGG
TTTGCTGCTGGCCTTCCGGGGACGGCGCGGCGGCCTCTCGCTGGCGCTGGTGTCGGTGATGCTGCTGGGGCTGCTCAGCT
GTCATGGCACGTCGGTCTGGCTGGCGCGCACCATACTGCCGCAATTCGCCCCTCTCCCCGTGGCCGCGCTGAAAACCGGC
AAGGTGCAGGCTGTGGTCGTCTTGGGCGGCGGGGCGCTGCCGCAGGCGCCTGAATACGGCGAGGCCCAACCCAATGCACA
CACGGCGGCACGCCTGCGCTATGGCGTCTGGCTGGCACGCCAGTCCGGCTTGCCCCTCGGGTTCAGCGGAGGCATGGGCT
GGGCCGCCAGCGAGTCGCAGCGCGACTCTGAAGCCGAGGTGGCAAGGCGCATGGCCTTGCAGGACTACCGCCTCGCGCTG
CGCTGGAGTGAAGCCGAGGCGCGTGACACAGCGGGCAATGCACGCCTGCTGGCGCCCCTGCTCCGGCGTGATGGCGTGCA
GCGTATTGCCTTGGTCACCCACGCCTGGCACATGCCGCGCTCCGTCGCGGCGTTTGAGGCAGCCGGCCTCCAGGTCACAC
CGGCGCCCATGGGCTATGTGATTCCTCTGGAGCGCGACATCCTGGAATGGATGCCTTCTGCGCACGGGCTGATGGCTTCG
CGCAACGTACTGCGCGAGGGGCTGGCGCTGGCCCTGGCGCGCTTCTGA

Upstream 100 bases:

>100_bases
GTGCGCAAACCGGCCTGCAGGCTTTTTACTGATACTGAGCTTTCAGGTGCGGCCGCCCCGGCGCGCGGGGTACTATCAGT
TTCTTTTTTTATAGCAATTG

Downstream 100 bases:

>100_bases
AACCGGTTGGCACCCGCAGGGTGTGATGATCGGCCGGGGGCGCCAGGTACGGCCTCTGACCCACCCGGTTGACGGTCGGA
AAGCAAGGGGCTATATTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVWLARTILPQFAPLPVAALKTG
KVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLARQSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLAL
RWSEAEARDTAGNARLLAPLLRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS
RNVLREGLALALARF

Sequences:

>Translated_255_residues
MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVWLARTILPQFAPLPVAALKTG
KVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLARQSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLAL
RWSEAEARDTAGNARLLAPLLRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS
RNVLREGLALALARF
>Mature_255_residues
MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVWLARTILPQFAPLPVAALKTG
KVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLARQSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLAL
RWSEAEARDTAGNARLLAPLLRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS
RNVLREGLALALARF

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 27284; Mature: 27284

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVW
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHH
LARTILPQFAPLPVAALKTGKVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLAR
HHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEE
QSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLALRWSEAEARDTAGNARLLAPL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHCCCCCHHHHHHH
LRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS
HHHCCHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCCCEEEECHHHHHHHCCCHHHHHHH
RNVLREGLALALARF
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVW
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHH
LARTILPQFAPLPVAALKTGKVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLAR
HHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEE
QSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLALRWSEAEARDTAGNARLLAPL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHCCCCCHHHHHHH
LRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS
HHHCCHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCCCEEEECHHHHHHHCCCHHHHHHH
RNVLREGLALALARF
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]