Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91786955

Identifier: 91786955

GI number: 91786955

Start: 1084572

End: 1085117

Strand: Reverse

Name: 91786955

Synonym: Bpro_1057

Alternate gene names: NA

Gene position: 1085117-1084572 (Counterclockwise)

Preceding gene: 91786959

Following gene: 91786953

Centisome position: 20.87

GC content: 64.84

Gene sequence:

>546_bases
ATGCGCATTCCCGAATGGAGCCCCAGCCTCAAGGCCCAACCGCAGGATCTGGTGGACGCCATCCTGGCGCGCCGGGGCGG
CACCATGATCAACCTCGACAAGGCGCTGCTGTGGAGCGAGCCGCTGGCGCGGGCCTGGAACATCTACCTGGGCGCGGTGC
GCACCGGGCTGCCAACCAGCCGCAAGCTGCGCGAACTGGGCATTTGCACCGTGGCACTGCTGACCGGCGCCGACTACGAA
TACCGTCACCATGCACCGGACTTCCTGGCCGCCGGTGGCAGCCAGTCCGAGCTGGATGCACTCCAGGCCCTGGTCAAAAG
CGATGCGCGCCAAACCACGGCGCATCCGGCGCTGGGTGCGGTGGAGCAGTTGTTGATTCAATACGCCGCGCAAATGACGC
TGGACGTCAAGGTCAGCGACCAGGTGTTCGCGGCACTGCGCGAGCATTTTGACAACACGGAACTGGTCGAACTGACCAGC
GCGATTGCCACCTACAACATGGTGGCGCGTTTTCTGGTGGCGCTGGGCGTATCGCCGGAGGAATGA

Upstream 100 bases:

>100_bases
CGCCATTATCCGCCGACCTCATCCGCCAACCTTACCCGCCGACGCTGCGCCTTGCCGCTTTGCGGCGCCGACCACCGCCC
CTCAACCACGAAAGACAAGC

Downstream 100 bases:

>100_bases
ATCGGGTCACGGCGAGATACCAGGCCGCGCACACACTGAAAGCGCGGGGCCGACAATTTCCCGCCGTGCCGCCCCAAGGC
GCAACAGCCCACTCAGGGGC

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: Carboxymuconolactone Decarboxylase Family; Alkylhydroperoxidase AhpD Family Core Domain-Containing

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTSRKLRELGICTVALLTGADYE
YRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGAVEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTS
AIATYNMVARFLVALGVSPEE

Sequences:

>Translated_181_residues
MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTSRKLRELGICTVALLTGADYE
YRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGAVEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTS
AIATYNMVARFLVALGVSPEE
>Mature_181_residues
MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTSRKLRELGICTVALLTGADYE
YRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGAVEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTS
AIATYNMVARFLVALGVSPEE

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19800; Mature: 19800

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTS
CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RKLRELGICTVALLTGADYEYRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGA
HHHHHHHHHHHHHHHCCCCCHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
VEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTSAIATYNMVARFLVALGVSPE
HHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
E
C
>Mature Secondary Structure
MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTS
CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RKLRELGICTVALLTGADYEYRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGA
HHHHHHHHHHHHHHHCCCCCHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
VEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTSAIATYNMVARFLVALGVSPE
HHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA