Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yjeP [C]

Identifier: 91786541

GI number: 91786541

Start: 643273

End: 644367

Strand: Direct

Name: yjeP [C]

Synonym: Bpro_0636

Alternate gene names: 91786541

Gene position: 643273-644367 (Clockwise)

Preceding gene: 91786540

Following gene: 91786542

Centisome position: 12.37

GC content: 66.76

Gene sequence:

>1095_bases
ATGAACCTGTCTGAGCTCGTCGCCTGGATGGACGACTCGTCGCTGCGCATCGTGCTGGCAGCCGGTGTCAGCGTTGTGCT
GGCGCTGGTGGTGGCCCGCATCGGTGCCGCCATCGTGCTGCGCGTGACGCGTTCCATGCCGGTGCTGGCCAAGGTGGCGG
AGCAATGCCGGTCCCCTGCACAGTTCCTGCTGCCATTGATTGCCTTGCAGGCCGTGTGGCACAGCGCACCCGATGCCTTC
CCGCTGATCGGCGGAATACGCCATGCCAATGGCCTGTTGCTGCTGGCAACCCTGACCTGGGCGGGCATGCGCGCGGCACG
CGGGGCAGCGCTGGGTGTGATCGGCTTGCACCCGGTCGATGTGGCTGACAACCTCAACGCCCGCCGCATCCACACGCAAA
CCCGCATGCTGGCTCGCACCCTCATGTTCGTCGTGCTGCTGGCCGGGCTGGCCCTGATGTTGATGACCTTTCCCGGCGCC
CGGCAGTTTGGGGCCAGCCTGCTGGCATCGGCCGGTGTGGCGGGGCTGGTGGTCGGCATTGCCGCGCGCCCCGTCTTCAG
CAACCTGATCGCCGGCTTGCAGATTGCGCTGGCGCAGCCCATCCGCATTGACGACGTCCTGATCGTTCAGGGCGAGTGGG
GGCGGGTCGAGGAAATCACCGGTGCCTATGTGGTGCTGAAGATCTGGGATGAGCGGCGCATGATCGTTCCGCTGCAATGG
TTTATTGAAAACCCCTTCCAGAACTGGACGCGCAGCAGCGCGCAAATCATCGGCACCGTGCTGCTCTGGGTGGATTACCG
CATGCCGATGGAGCCGCTGCGCCACGCCGCACTGCGGGCCTGCGAAGCGGCCCCTGAATGGGACAAGCGGCTGTGCCTGC
TGCAGGTGGTGGAGGCGGGCGAGCACAGCATGCAGTTGCGCCTGCTGGTCACGTCGGCCAACTCCAGCCTGAACTGGGAT
TTGCGCTGCAAGGTGCGCGAGGCGCTGGTGGATTTCATGCAGCGCGAGTACCCGCAATACCTGCCCCGCATGCGGGCAGA
GCTGGCGCAAGCGCCGCAGCCCGGGCAGAACGCGGCGGGCGGGCTGGCCGGCTGA

Upstream 100 bases:

>100_bases
AGGTGGCGCGTGCCAACGCCAAGCTGGCCGCGTCCCGGGTCAAGCCCCGGGTGGCGAAGGGCTGATGCATGCTGACAGGG
CTGCGGTATGAGGCTGCGGT

Downstream 100 bases:

>100_bases
GCCAAAGCCCGCGGGCCCGCAGCCCAAGGCAGGCAAAGCGGGCAGGCAGGGTGCGCATGCGATGATCAGGGGCATCACGA
AAGGTGATGGTTGAACCTAG

Product: mechanosensitive ion channel protein MscS

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel Family Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel MscS; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Domain-Containing Protein; MscS Family Transporter; Mechanosensitive Ion Channel Protein; MscS Mechanosensitive Ion Channel Protein; Transporter MscS Family; Small-Conductance Mechanosensitive Channel-Like Protein; Mechanosensitive Channel Protein

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MNLSELVAWMDDSSLRIVLAAGVSVVLALVVARIGAAIVLRVTRSMPVLAKVAEQCRSPAQFLLPLIALQAVWHSAPDAF
PLIGGIRHANGLLLLATLTWAGMRAARGAALGVIGLHPVDVADNLNARRIHTQTRMLARTLMFVVLLAGLALMLMTFPGA
RQFGASLLASAGVAGLVVGIAARPVFSNLIAGLQIALAQPIRIDDVLIVQGEWGRVEEITGAYVVLKIWDERRMIVPLQW
FIENPFQNWTRSSAQIIGTVLLWVDYRMPMEPLRHAALRACEAAPEWDKRLCLLQVVEAGEHSMQLRLLVTSANSSLNWD
LRCKVREALVDFMQREYPQYLPRMRAELAQAPQPGQNAAGGLAG

Sequences:

>Translated_364_residues
MNLSELVAWMDDSSLRIVLAAGVSVVLALVVARIGAAIVLRVTRSMPVLAKVAEQCRSPAQFLLPLIALQAVWHSAPDAF
PLIGGIRHANGLLLLATLTWAGMRAARGAALGVIGLHPVDVADNLNARRIHTQTRMLARTLMFVVLLAGLALMLMTFPGA
RQFGASLLASAGVAGLVVGIAARPVFSNLIAGLQIALAQPIRIDDVLIVQGEWGRVEEITGAYVVLKIWDERRMIVPLQW
FIENPFQNWTRSSAQIIGTVLLWVDYRMPMEPLRHAALRACEAAPEWDKRLCLLQVVEAGEHSMQLRLLVTSANSSLNWD
LRCKVREALVDFMQREYPQYLPRMRAELAQAPQPGQNAAGGLAG
>Mature_364_residues
MNLSELVAWMDDSSLRIVLAAGVSVVLALVVARIGAAIVLRVTRSMPVLAKVAEQCRSPAQFLLPLIALQAVWHSAPDAF
PLIGGIRHANGLLLLATLTWAGMRAARGAALGVIGLHPVDVADNLNARRIHTQTRMLARTLMFVVLLAGLALMLMTFPGA
RQFGASLLASAGVAGLVVGIAARPVFSNLIAGLQIALAQPIRIDDVLIVQGEWGRVEEITGAYVVLKIWDERRMIVPLQW
FIENPFQNWTRSSAQIIGTVLLWVDYRMPMEPLRHAALRACEAAPEWDKRLCLLQVVEAGEHSMQLRLLVTSANSSLNWD
LRCKVREALVDFMQREYPQYLPRMRAELAQAPQPGQNAAGGLAG

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39745; Mature: 39745

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSELVAWMDDSSLRIVLAAGVSVVLALVVARIGAAIVLRVTRSMPVLAKVAEQCRSPA
CCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHH
QFLLPLIALQAVWHSAPDAFPLIGGIRHANGLLLLATLTWAGMRAARGAALGVIGLHPVD
HHHHHHHHHHHHHHCCCCCCHHHHCHHHCCCEEEEEHHHHHHHHHHCCCEEEEEECCCCC
VADNLNARRIHTQTRMLARTLMFVVLLAGLALMLMTFPGARQFGASLLASAGVAGLVVGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH
AARPVFSNLIAGLQIALAQPIRIDDVLIVQGEWGRVEEITGAYVVLKIWDERRMIVPLQW
HHHHHHHHHHHHHHHHHCCCCEECCEEEEECCCCCHHHHCCCEEEEEEECCCCEEEEHHH
FIENPFQNWTRSSAQIIGTVLLWVDYRMPMEPLRHAALRACEAAPEWDKRLCLLQVVEAG
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
EHSMQLRLLVTSANSSLNWDLRCKVREALVDFMQREYPQYLPRMRAELAQAPQPGQNAAG
CCCEEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GLAG
CCCC
>Mature Secondary Structure
MNLSELVAWMDDSSLRIVLAAGVSVVLALVVARIGAAIVLRVTRSMPVLAKVAEQCRSPA
CCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHH
QFLLPLIALQAVWHSAPDAFPLIGGIRHANGLLLLATLTWAGMRAARGAALGVIGLHPVD
HHHHHHHHHHHHHHCCCCCCHHHHCHHHCCCEEEEEHHHHHHHHHHCCCEEEEEECCCCC
VADNLNARRIHTQTRMLARTLMFVVLLAGLALMLMTFPGARQFGASLLASAGVAGLVVGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH
AARPVFSNLIAGLQIALAQPIRIDDVLIVQGEWGRVEEITGAYVVLKIWDERRMIVPLQW
HHHHHHHHHHHHHHHHHCCCCEECCEEEEECCCCCHHHHCCCEEEEEEECCCCEEEEHHH
FIENPFQNWTRSSAQIIGTVLLWVDYRMPMEPLRHAALRACEAAPEWDKRLCLLQVVEAG
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
EHSMQLRLLVTSANSSLNWDLRCKVREALVDFMQREYPQYLPRMRAELAQAPQPGQNAAG
CCCEEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GLAG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA