| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is sgaA [H]
Identifier: 91786454
GI number: 91786454
Start: 546707
End: 547918
Strand: Reverse
Name: sgaA [H]
Synonym: Bpro_0548
Alternate gene names: 91786454
Gene position: 547918-546707 (Counterclockwise)
Preceding gene: 91786455
Following gene: 91786451
Centisome position: 10.54
GC content: 64.85
Gene sequence:
>1212_bases ATGAACCTGAATTTCCATCCCGCCGGACGCCATTTCCTGCAAATCCCCGGACCCAGCCCGGTGCCGGATCGCCTGCTGCG CGCCATGAGCTACCCCACCATCGACCACCGCGGACCCGAATTCGGCGCCCTCGGGCGCAAGGTGCTCTCCGGCATCAAGG ACATCTTCAAGACGCGCCACCCCGTGGTCATCTATCCCGCCTCCGGCACCGGCGCGTGGGAGGCTGCACTGGTGAATACG CTGAGCCCGGGAGATGCCGTTCTCATGTTCGAGACCGGCCACTTCGCCAGTCTCTGGAACAAGATGGCGCTGCGGCTGGG CCTGAAGCCGGAATTCATCGGCCTGCCGGGCACCGAGGGCTGGCGAAACGGCGTGCAGGCCGACATGATCGAGCAACGGC TTCGCAACGACGCGCAGCATCAAATCAAGGCTGTTTGCGTGGTCCACAACGAGACCTCCACCGGCGTCACCTCCAACATC GCGGCCGTGCGCCGCGCCATCGATGCGGCCAAGCATCCCGCCCTGCTGCTGGTCGACACCATTTCTGGCCTGGCCTCAGC CGACTACCGCCATGACGAATGGGGTGTCGATGTCACCATCAGCGGCTCGCAAAAGGGTCTGATGCTGCCGCCGGGCATCA GCTTTAACGCGCTGTCGCCCAAAGCCGTTGCCGCCAGCCGCGATGCCCTGCTGCCCAAGTCCTTCTGGGCCTGGGACGAG ATTGTTGAAATGAATCAGACGGGCTACTGGCCCTACACGCCGAATACCAACCTGCTGTATGCCCTGAGCGAGGCGCTGGA CATGATTTCGGCCGAGGGACTGCCCCAGGTTTTTGCCCGCCACGAACGCCTGGGCAAGGCCTGCCGCAATGCCGTAGAGG CCTGGGGGCTGGAAATCCAGTGCGCCGATCCGGCGGTCTACTCCCCGGTGCTGACGGGCGTGATGATGCCCGAGGGTGTG GATGCCGACCGGGTACGGCAAATCGTTTACCAGCACTTCAACATGTCGCTGGGCGCGGGGCTCGGCAAGGTGAAGGGCCG CATGTTCCGCATCGGCCATCTCGGCGAATGCAATGACCTCACCCTGCTGGCCGCGCTTGCGGGCTGTGAGATGGGCCTGA AACTCGCAGGCGTGCGTCTGCGCGAGAGCGGCACCTCGGCGGCCATGGAGTTTCTGGCAGCCTCGGCGCAGCCCACAGCG ACACTGGGCTAG
Upstream 100 bases:
>100_bases AAAAGTTCAGACTACTTCAGCCAACAAGCCCATTCTCTTATAGCTTCAAGGCTCGTACAGTCTCAATAAATTGTATGCAA TTTATTGAAGGAGAACCCTG
Downstream 100 bases:
>100_bases CTCCGCAGAAAAACGTGCATCTCGGCCGCAATCTCTTCAACGTGCGTCTCCAGCGCGAAATGGCTGGCGTCGAGGAGCTT GACAACGGCGTTGGGGTTGT
Product: Serine--glyoxylate transaminase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRHPVVIYPASGTGAWEAALVNT LSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEGWRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNI AAVRRAIDAAKHPALLLVDTISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQCADPAVYSPVLTGVMMPEGV DADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDLTLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTA TLG
Sequences:
>Translated_403_residues MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRHPVVIYPASGTGAWEAALVNT LSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEGWRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNI AAVRRAIDAAKHPALLLVDTISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQCADPAVYSPVLTGVMMPEGV DADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDLTLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTA TLG >Mature_403_residues MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRHPVVIYPASGTGAWEAALVNT LSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEGWRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNI AAVRRAIDAAKHPALLLVDTISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQCADPAVYSPVLTGVMMPEGV DADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDLTLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTA TLG
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=358, Percent_Identity=31.5642458100559, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17536281, Length=353, Percent_Identity=29.7450424929178, Blast_Score=131, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6321079, Length=389, Percent_Identity=26.4781491002571, Blast_Score=108, Evalue=1e-24, Organism=Drosophila melanogaster, GI17530823, Length=352, Percent_Identity=30.1136363636364, Blast_Score=141, Evalue=9e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 43542; Mature: 43542
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRH CCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC PVVIYPASGTGAWEAALVNTLSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEG CEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCHH WRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNIAAVRRAIDAAKHPALLLVDT HHCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEH ISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE HHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQ HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE CADPAVYSPVLTGVMMPEGVDADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDL ECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHCCEEEEECCCCCCCCH TLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTATLG HHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRH CCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC PVVIYPASGTGAWEAALVNTLSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEG CEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCHH WRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNIAAVRRAIDAAKHPALLLVDT HHCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEH ISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE HHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQ HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE CADPAVYSPVLTGVMMPEGVDADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDL ECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHCCEEEEECCCCCCCCH TLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTATLG HHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8144463 [H]