Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is exoU [H]

Identifier: 91785600

GI number: 91785600

Start: 4657676

End: 4658482

Strand: Reverse

Name: exoU [H]

Synonym: Bxe_A0177

Alternate gene names: 91785600

Gene position: 4658482-4657676 (Counterclockwise)

Preceding gene: 91785602

Following gene: 91785599

Centisome position: 95.15

GC content: 66.42

Gene sequence:

>807_bases
ATGACGCCCATTTCGATCATCATTCCCTGCTACAACGGCGCGGCGACGCTCGTCCGTGCTTTGCAAAGCTGCCGGATCCA
GCCGGAGGCCGCGCAGATCATCGTGGTGGACGACGGTTCGTCCGACGCCTCCGCGGACATCGCGGCGCAGTGCGGCAGCC
TCGATTCGCGCGTGTGTCTGCTGCGAATGCCATACAACGGCGGCGCGGCGCGTGCGCGCAACTGGGCTGCGATGCACGCG
TCGCACGACCTGCTCGCCTTTCTCGACGCCGACGACGAATACCTGCCCGGCGCCCTCGGCGCGGCGAGCGCGTTCCTCGC
GCAACATCCCGACGAAGTGTCCGTGCGGCTCGACGTCGAGTACACGGATTTTCCCCGCGAGCTCACCGCTCATCCCGACT
TCGCCGCGCATGCGGCAACGCTCAGCAACACCGTGCCGAGCAGCCTGCTGATTCGCCGTACGGCTTTTCTCGCGCTCGGC
GGCTTTCCGATGGACGACGCGTTCCGCCGCATTGGCGGCGAGGACGGCGCGTTTTCCTGGGCGCTGCGCGACATCTTCGG
CAATCCGCGCCTGGAAGATGCGAAGCGCGTGCGCATGCATTACCACGCAGGCATCCACGCGGAGCGCTACTTTCGCATCG
CGCTCGGCCTGCAGGCCGCCGACCCCGACGATACAGCCGATGCGTTTCGCTTCTCCCGGCAGTTCCTCGATATGGCGCGT
GCGGGGATCGCGCAATTGCGCGCGGCAAAAGTGATGGTTCAGGTTCCGGCACAAAACGCACCGGCCGCGCCAGGGAGTCT
TCCATAA

Upstream 100 bases:

>100_bases
TCGCCGAAAGCGCCCCACCCATTTCAAGATGCGCCTGGCGGCAAGCGGAATAACATCGTCGGTTCTTCACCGTTGACCCG
CCCCGCGCGCCCGTTCATTC

Downstream 100 bases:

>100_bases
GCCTGGGCGGCGGCCGCATCGGAGCAGGCCGCGCCGGTTCTCCTCATACTCGCAGGCCGGCAAATACGAACCCGAACCGC
GCCCCGAAGCCATCTCGATT

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCLLRMPYNGGAARARNWAAMHA
SHDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVEYTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALG
GFPMDDAFRRIGGEDGAFSWALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMAR
AGIAQLRAAKVMVQVPAQNAPAAPGSLP

Sequences:

>Translated_268_residues
MTPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCLLRMPYNGGAARARNWAAMHA
SHDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVEYTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALG
GFPMDDAFRRIGGEDGAFSWALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMAR
AGIAQLRAAKVMVQVPAQNAPAAPGSLP
>Mature_267_residues
TPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCLLRMPYNGGAARARNWAAMHAS
HDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVEYTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALGG
FPMDDAFRRIGGEDGAFSWALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMARA
GIAQLRAAKVMVQVPAQNAPAAPGSLP

Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the sixth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fifth and sixth sugar [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 28861; Mature: 28730

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCL
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEE
LRMPYNGGAARARNWAAMHASHDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVE
EEECCCCCCHHHCCCHHEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEE
YTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALGGFPMDDAFRRIGGEDGAFSW
ECCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
ALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMAR
HHHHHHCCCCCCHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
AGIAQLRAAKVMVQVPAQNAPAAPGSLP
HHHHHHHHHEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCL
CCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEE
LRMPYNGGAARARNWAAMHASHDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVE
EEECCCCCCHHHCCCHHEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEE
YTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALGGFPMDDAFRRIGGEDGAFSW
ECCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
ALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMAR
HHHHHHCCCCCCHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
AGIAQLRAAKVMVQVPAQNAPAAPGSLP
HHHHHHHHHEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226645; 8118055; 11481431 [H]