| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is eamA [H]
Identifier: 91785035
GI number: 91785035
Start: 4056936
End: 4057838
Strand: Reverse
Name: eamA [H]
Synonym: Bxe_A0745
Alternate gene names: 91785035
Gene position: 4057838-4056936 (Counterclockwise)
Preceding gene: 91785038
Following gene: 91785032
Centisome position: 82.88
GC content: 65.89
Gene sequence:
>903_bases ATGTCGCCCAGGGATTTGCTGCTCGCGCTGGTCGTCGTCGTGGCATGGGGCATCAACTTCGTCGTGATCAAGGTGGGTCT GCATGGCGTGCCGCCGATGCTGCTCGGCGCGCTGCGCTTCACGCTCGCCGCGGTGCCGGCGGTGTTTTTCATCAAACGGC CCAACCTGCCGTGGCGCTGGCTGCTCGCCTACGGCGCGACGATCTCGTTCGGGCAGTTCGCTTTTCTGTTCTCGGCCATG TATGTCGGCATGCCGGCCGGACTCGCGTCGCTGGTGTTGCAGGCGCAGGCGTTCTTTACGCTGATCTTCGCGGCTATCTT CCTGCATGAGCGGTTCCGCTTGCCGAATGTCGCGGGATTGGCGATCGCGGCGGCCGGGCTTGCCGTGATCGGCATGCAAG GGGGGCGTGCCATGACGCTGGCCGGTTTCGTCCTCACGCTGTGCGCCGCGTGTTCGTGGGCGCTCGGCAACATCGTCACG AAGAAGGTCGGCAAGGTCGATCTCGTCGGACTCGTGGTGTGGGGCAGCCTGATTCCGCCGCTGCCGTTTTTTGCGCTGTC GTACGCGTTCGAGGGCCCGCAGCGGATCGCCGCGGCGCTCGCCGGCATCAGCGCGATGTCGATCTTCGCGATCGTGTATC TCGCGTTCATTGCCACGCTGCTCGGCTACGGCTTGTGGAGCCGGCTGCTGTCGCGCTACCCGGCAAGCCAGGTCGCGCCG TTTTCGCTGCTGGTGCCGATTGTCGGGCTCGCGTCGGCGTCGCTGTTTCTCGACGAGCAACTGTCCTCGGCGCAGATCGC CGGTGCGTTGCTGGTGATGGCGGGGTTGGCCGTGAACGTGTTCGGCGGCTGGGTGGTGCAGCGGTTTTCGCCGGCGCGTC GGGCAACTGACGCGTCTGATTGA
Upstream 100 bases:
>100_bases CGGCGTTCCGGGAATCCGTAATGCGGTCCATCGGGCGGTCCATCGCCCGCTTCTGCCGGCTCCGCTAAACTGCCGGATCG AACAATCAATTGGAGAGCGC
Downstream 100 bases:
>100_bases GCACGAAAGACGCGCGCGAAAACGCGCACCACGACGACGAAAATACGGCCGCATCGAGCGGCCGTATTTCATTGTGTTGC TGCAAGCGAAGTCATCACGT
Product: DMT superfamily drug/metabolite efflux pump
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSPRDLLLALVVVVAWGINFVVIKVGLHGVPPMLLGALRFTLAAVPAVFFIKRPNLPWRWLLAYGATISFGQFAFLFSAM YVGMPAGLASLVLQAQAFFTLIFAAIFLHERFRLPNVAGLAIAAAGLAVIGMQGGRAMTLAGFVLTLCAACSWALGNIVT KKVGKVDLVGLVVWGSLIPPLPFFALSYAFEGPQRIAAALAGISAMSIFAIVYLAFIATLLGYGLWSRLLSRYPASQVAP FSLLVPIVGLASASLFLDEQLSSAQIAGALLVMAGLAVNVFGGWVVQRFSPARRATDASD
Sequences:
>Translated_300_residues MSPRDLLLALVVVVAWGINFVVIKVGLHGVPPMLLGALRFTLAAVPAVFFIKRPNLPWRWLLAYGATISFGQFAFLFSAM YVGMPAGLASLVLQAQAFFTLIFAAIFLHERFRLPNVAGLAIAAAGLAVIGMQGGRAMTLAGFVLTLCAACSWALGNIVT KKVGKVDLVGLVVWGSLIPPLPFFALSYAFEGPQRIAAALAGISAMSIFAIVYLAFIATLLGYGLWSRLLSRYPASQVAP FSLLVPIVGLASASLFLDEQLSSAQIAGALLVMAGLAVNVFGGWVVQRFSPARRATDASD >Mature_299_residues SPRDLLLALVVVVAWGINFVVIKVGLHGVPPMLLGALRFTLAAVPAVFFIKRPNLPWRWLLAYGATISFGQFAFLFSAMY VGMPAGLASLVLQAQAFFTLIFAAIFLHERFRLPNVAGLAIAAAGLAVIGMQGGRAMTLAGFVLTLCAACSWALGNIVTK KVGKVDLVGLVVWGSLIPPLPFFALSYAFEGPQRIAAALAGISAMSIFAIVYLAFIATLLGYGLWSRLLSRYPASQVAPF SLLVPIVGLASASLFLDEQLSSAQIAGALLVMAGLAVNVFGGWVVQRFSPARRATDASD
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=288, Percent_Identity=52.7777777777778, Blast_Score=270, Evalue=8e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31717; Mature: 31586
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRDLLLALVVVVAWGINFVVIKVGLHGVPPMLLGALRFTLAAVPAVFFIKRPNLPWRW CCHHHHHHHHHHHHHHCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHH LLAYGATISFGQFAFLFSAMYVGMPAGLASLVLQAQAFFTLIFAAIFLHERFRLPNVAGL HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AIAAAGLAVIGMQGGRAMTLAGFVLTLCAACSWALGNIVTKKVGKVDLVGLVVWGSLIPP HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC LPFFALSYAFEGPQRIAAALAGISAMSIFAIVYLAFIATLLGYGLWSRLLSRYPASQVAP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH FSLLVPIVGLASASLFLDEQLSSAQIAGALLVMAGLAVNVFGGWVVQRFSPARRATDASD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure SPRDLLLALVVVVAWGINFVVIKVGLHGVPPMLLGALRFTLAAVPAVFFIKRPNLPWRW CHHHHHHHHHHHHHHCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHH LLAYGATISFGQFAFLFSAMYVGMPAGLASLVLQAQAFFTLIFAAIFLHERFRLPNVAGL HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AIAAAGLAVIGMQGGRAMTLAGFVLTLCAACSWALGNIVTKKVGKVDLVGLVVWGSLIPP HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC LPFFALSYAFEGPQRIAAALAGISAMSIFAIVYLAFIATLLGYGLWSRLLSRYPASQVAP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH FSLLVPIVGLASASLFLDEQLSSAQIAGALLVMAGLAVNVFGGWVVQRFSPARRATDASD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]