Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yjeS [H]

Identifier: 91785032

GI number: 91785032

Start: 4053427

End: 4054683

Strand: Reverse

Name: yjeS [H]

Synonym: Bxe_A0748

Alternate gene names: 91785032

Gene position: 4054683-4053427 (Counterclockwise)

Preceding gene: 91785035

Following gene: 91785031

Centisome position: 82.82

GC content: 65.0

Gene sequence:

>1257_bases
ATGAACCGAAGTCCGGAGTCCCCTGTTTCCTGCCCGCCTGCGTCTGACGACGATGCGCGTGCCGAGCGTCATTTCAATGA
AACGGCGCTGAACGCGCTCGCGCTGAACATCAAAACGTGGGGCCGTGAACTGGGTTTCGGAGCGATCGGCATTAGCGACA
CCGATCTCTCCGCCGCCGAAGCGCCGCTTGCAGCCTGGCTGGAAGCGGGTTGCCACGGCGAGATGGATTATATGGCGAAA
CACGGCATGAAACGCGCGCGGCCCGCCGAGCTTGTGGCCGGCACGCGACGTGTGATCACCGCGCGCGTCGCTTATCTGCC
TGCGGGGACAATGAGTGGAAAGGCGCATGAAAGCGCTTTGCAGGACGGCCCGCTCGCGCTGGAGAAGCAGGCGAGGCAGG
ACTGGCGCGCGGTTGAGCACGCGCGGCTCGCGGACCCGTGCGCAGCGGTGGTGTCGATCTATGCGCGCGGCCGCGACTAT
CACAAGGTCATGCGTAACCGTCTGCAACATCTCGCCGAAAAAATCGAGGCGGAGATCGGCGCGTTCGGCTACCGCGTATT
TACCGATTCGGCGCCGGTGCTGGAGGTAGAACTTGCCCAGAAGGCCGGCATCGGCTGGCGCGGCAAGCACACGCTGCTGT
TGCAGCGCGACGCCGGGTCGCTGTTTTTCCTCGGTGAAATCTATGTCGACGTGCCGTTGCCGACGGATGCCGAAACCTCG
CCCGAGCGCGCGCCCGAAACGCCGGGCTCGCATTGCGGCAGTTGCACGCGCTGCATCGGCGCGTGTCCGACCGGTGCGAT
CGTCGCGCCTTACAAGGTCGATGCACGCCTGTGCATCTCCTATCTCACGATCGAGTTGAAGGGCAGCATTCCGCTGGAAA
TGCGGCCGCTGATCGGCAATCGCGTGTATGGCTGCGACGATTGTCAGCTCGTGTGCCCGTGGAACAAGTTCGCGCAGGCC
GCGCCGGTCGCCGATTTCGACGTGCGGCATGGGCTCGATCGCGCGTCGCTCGTCGAGCTTTTCTCGTGGAGCGCGGACGA
CTTCGAGACGCGCATGCAGGGCAGCGCGATTCGCCGGATCGGCTACGAGAGCTGGCTGCGCAATCTCGCGGTGGGCATGG
GCAATGCGCTGCGCGCGTCGCCCGACAGTTTGAGCGAAGCGGCGCGTGACGCAATCGTGCAGGCGCTCAGAGCGCGTGCC
GGCGACGCTTCGGCAGTTGTGCGCGAGCATGTGGAATGGGCGTTGGAAGCGGCGTAA

Upstream 100 bases:

>100_bases
GCGGCTTCGTCCGCGAACGCGAAGGTGCGTTCGAGCAGGACGTTGGCGGGCGGTTGGATCGCGAGATCGGGATTGACAGG
CATTCTCGTAAAATGGCGTG

Downstream 100 bases:

>100_bases
AGTAGCGGCAATCTATGGGGCACTGGCGTGCGCCGCGCATCTGCGCGATATGCAGGTGCGCCAGCTTGTGAGGCGGAACG
TCGCGCCAGTGAGGAGCAGG

Product: 4Fe-4S cluster binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAEAPLAAWLEAGCHGEMDYMAK
HGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESALQDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDY
HKVMRNRLQHLAEKIEAEIGAFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS
PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGNRVYGCDDCQLVCPWNKFAQA
APVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRIGYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARA
GDASAVVREHVEWALEAA

Sequences:

>Translated_418_residues
MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAEAPLAAWLEAGCHGEMDYMAK
HGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESALQDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDY
HKVMRNRLQHLAEKIEAEIGAFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS
PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGNRVYGCDDCQLVCPWNKFAQA
APVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRIGYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARA
GDASAVVREHVEWALEAA
>Mature_418_residues
MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAEAPLAAWLEAGCHGEMDYMAK
HGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESALQDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDY
HKVMRNRLQHLAEKIEAEIGAFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS
PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGNRVYGCDDCQLVCPWNKFAQA
APVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRIGYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARA
GDASAVVREHVEWALEAA

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=386, Percent_Identity=50, Blast_Score=377, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 45390; Mature: 45390

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHCCCCEECCCCCCCCHHH
APLAAWLEAGCHGEMDYMAKHGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESAL
HHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
QDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDYHKVMRNRLQHLAEKIEAEIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS
HCEEEEEECCCCEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCC
PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGN
CCCCCCCCCCCCCHHHHHHHCCCCCCEECCEECHHHHEEEEEEEEECCCCCCEECCCCCC
RVYGCDDCQLVCPWNKFAQAAPVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRI
CCCCCCCCEEECCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
GYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARAGDASAVVREHVEWALEAA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHCCCCEECCCCCCCCHHH
APLAAWLEAGCHGEMDYMAKHGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESAL
HHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
QDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDYHKVMRNRLQHLAEKIEAEIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS
HCEEEEEECCCCEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCC
PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGN
CCCCCCCCCCCCCHHHHHHHCCCCCCEECCEECHHHHEEEEEEEEECCCCCCEECCCCCC
RVYGCDDCQLVCPWNKFAQAAPVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRI
CCCCCCCCEEECCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
GYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARAGDASAVVREHVEWALEAA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]