| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yjeS [H]
Identifier: 91785032
GI number: 91785032
Start: 4053427
End: 4054683
Strand: Reverse
Name: yjeS [H]
Synonym: Bxe_A0748
Alternate gene names: 91785032
Gene position: 4054683-4053427 (Counterclockwise)
Preceding gene: 91785035
Following gene: 91785031
Centisome position: 82.82
GC content: 65.0
Gene sequence:
>1257_bases ATGAACCGAAGTCCGGAGTCCCCTGTTTCCTGCCCGCCTGCGTCTGACGACGATGCGCGTGCCGAGCGTCATTTCAATGA AACGGCGCTGAACGCGCTCGCGCTGAACATCAAAACGTGGGGCCGTGAACTGGGTTTCGGAGCGATCGGCATTAGCGACA CCGATCTCTCCGCCGCCGAAGCGCCGCTTGCAGCCTGGCTGGAAGCGGGTTGCCACGGCGAGATGGATTATATGGCGAAA CACGGCATGAAACGCGCGCGGCCCGCCGAGCTTGTGGCCGGCACGCGACGTGTGATCACCGCGCGCGTCGCTTATCTGCC TGCGGGGACAATGAGTGGAAAGGCGCATGAAAGCGCTTTGCAGGACGGCCCGCTCGCGCTGGAGAAGCAGGCGAGGCAGG ACTGGCGCGCGGTTGAGCACGCGCGGCTCGCGGACCCGTGCGCAGCGGTGGTGTCGATCTATGCGCGCGGCCGCGACTAT CACAAGGTCATGCGTAACCGTCTGCAACATCTCGCCGAAAAAATCGAGGCGGAGATCGGCGCGTTCGGCTACCGCGTATT TACCGATTCGGCGCCGGTGCTGGAGGTAGAACTTGCCCAGAAGGCCGGCATCGGCTGGCGCGGCAAGCACACGCTGCTGT TGCAGCGCGACGCCGGGTCGCTGTTTTTCCTCGGTGAAATCTATGTCGACGTGCCGTTGCCGACGGATGCCGAAACCTCG CCCGAGCGCGCGCCCGAAACGCCGGGCTCGCATTGCGGCAGTTGCACGCGCTGCATCGGCGCGTGTCCGACCGGTGCGAT CGTCGCGCCTTACAAGGTCGATGCACGCCTGTGCATCTCCTATCTCACGATCGAGTTGAAGGGCAGCATTCCGCTGGAAA TGCGGCCGCTGATCGGCAATCGCGTGTATGGCTGCGACGATTGTCAGCTCGTGTGCCCGTGGAACAAGTTCGCGCAGGCC GCGCCGGTCGCCGATTTCGACGTGCGGCATGGGCTCGATCGCGCGTCGCTCGTCGAGCTTTTCTCGTGGAGCGCGGACGA CTTCGAGACGCGCATGCAGGGCAGCGCGATTCGCCGGATCGGCTACGAGAGCTGGCTGCGCAATCTCGCGGTGGGCATGG GCAATGCGCTGCGCGCGTCGCCCGACAGTTTGAGCGAAGCGGCGCGTGACGCAATCGTGCAGGCGCTCAGAGCGCGTGCC GGCGACGCTTCGGCAGTTGTGCGCGAGCATGTGGAATGGGCGTTGGAAGCGGCGTAA
Upstream 100 bases:
>100_bases GCGGCTTCGTCCGCGAACGCGAAGGTGCGTTCGAGCAGGACGTTGGCGGGCGGTTGGATCGCGAGATCGGGATTGACAGG CATTCTCGTAAAATGGCGTG
Downstream 100 bases:
>100_bases AGTAGCGGCAATCTATGGGGCACTGGCGTGCGCCGCGCATCTGCGCGATATGCAGGTGCGCCAGCTTGTGAGGCGGAACG TCGCGCCAGTGAGGAGCAGG
Product: 4Fe-4S cluster binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAEAPLAAWLEAGCHGEMDYMAK HGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESALQDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDY HKVMRNRLQHLAEKIEAEIGAFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGNRVYGCDDCQLVCPWNKFAQA APVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRIGYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARA GDASAVVREHVEWALEAA
Sequences:
>Translated_418_residues MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAEAPLAAWLEAGCHGEMDYMAK HGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESALQDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDY HKVMRNRLQHLAEKIEAEIGAFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGNRVYGCDDCQLVCPWNKFAQA APVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRIGYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARA GDASAVVREHVEWALEAA >Mature_418_residues MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAEAPLAAWLEAGCHGEMDYMAK HGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESALQDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDY HKVMRNRLQHLAEKIEAEIGAFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGNRVYGCDDCQLVCPWNKFAQA APVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRIGYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARA GDASAVVREHVEWALEAA
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=386, Percent_Identity=50, Blast_Score=377, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 45390; Mature: 45390
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHCCCCEECCCCCCCCHHH APLAAWLEAGCHGEMDYMAKHGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESAL HHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH QDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDYHKVMRNRLQHLAEKIEAEIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS HCEEEEEECCCCEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCC PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGN CCCCCCCCCCCCCHHHHHHHCCCCCCEECCEECHHHHEEEEEEEEECCCCCCEECCCCCC RVYGCDDCQLVCPWNKFAQAAPVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRI CCCCCCCCEEECCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH GYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARAGDASAVVREHVEWALEAA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRSPESPVSCPPASDDDARAERHFNETALNALALNIKTWGRELGFGAIGISDTDLSAAE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHCCCCEECCCCCCCCHHH APLAAWLEAGCHGEMDYMAKHGMKRARPAELVAGTRRVITARVAYLPAGTMSGKAHESAL HHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH QDGPLALEKQARQDWRAVEHARLADPCAAVVSIYARGRDYHKVMRNRLQHLAEKIEAEIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AFGYRVFTDSAPVLEVELAQKAGIGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAETS HCEEEEEECCCCEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCC PERAPETPGSHCGSCTRCIGACPTGAIVAPYKVDARLCISYLTIELKGSIPLEMRPLIGN CCCCCCCCCCCCCHHHHHHHCCCCCCEECCEECHHHHEEEEEEEEECCCCCCEECCCCCC RVYGCDDCQLVCPWNKFAQAAPVADFDVRHGLDRASLVELFSWSADDFETRMQGSAIRRI CCCCCCCCEEECCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH GYESWLRNLAVGMGNALRASPDSLSEAARDAIVQALRARAGDASAVVREHVEWALEAA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]