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The map label for this gene is ygdL [H]

Identifier: 91785038

GI number: 91785038

Start: 4059935

End: 4060792

Strand: Reverse

Name: ygdL [H]

Synonym: Bxe_A0742

Alternate gene names: 91785038

Gene position: 4060792-4059935 (Counterclockwise)

Preceding gene: 91785042

Following gene: 91785035

Centisome position: 82.94

GC content: 65.62

Gene sequence:

>858_bases
ATGTCCAGCACCACCGCGCCATCCGATCTTACTACCAGCCTCGACGGGAGTGAAACCGCCGACCGCGCGCGGCGCTTCGG
CGGCATTGCCCGCTTGTACGGCGCACCGGCGCTCGCTGCGTTCGAAGGCGCGCACGTGGCGGTCATCGGCATTGGCGGGG
TCGGGTCGTGGGTGGCCGAGGCGCTCGCGCGCAGCGCGCTCGGCACGCTGACGCTGATCGATCTCGACAACGTCGCCGAA
AGCAACACTAACCGGCAGATCCATGCGCTCGACGGCAACTACGGGAAACCGAAGGTCGAAGCGATGGCGGAGCGCATTGC
GGCGATCAATCCGTTTTGCGACGTGCGCCTGATCGAAGACTTCGTCGAGCCGGACAATTTCGAGGCTACGCTCGGCGGCG
GCTTCGATTACGTGGTCGATGCGATCGACAGCGTGCGCACCAAGACCGCGCTGATCGCATGGTGTGTGGAAAAGAAACAG
CCGTTGATCACGGTCGGCGGCGCGGGCGGCCAGCTCGACCCGACGCGCATTCGCATCGACGATCTCGCGCTGACCATTCA
GGACCCGCTGTTGTCGAAGGTGCGCGGCCAACTGCGCAAACAGCACGGCTTTCCGCGCGGGCCGAAGGCGAAGTTCAAGG
TGAGCGCGGTGTATTCCGACGAGCCGCTGATCTACCCGGAAGCCGCCGTCTGCGATATAGACATGGAAGCCGAGCACGTG
AGCACGTCGCCGGGTCACACGGGACCGGTCGGTCTGAACTGTGCGGGCTTTGGGTCGAGCGTGTGCGTGACGGCGAGCTT
CGGTTTTGCCGCGGCCGCGCATGTGCTGCGGGCGTTGGCGAAGCAGGCCACGGCTTGA

Upstream 100 bases:

>100_bases
CCACGGCGATGCAAGCTGATGCGTTCAGGCAGAATACGGGGTTGCGCACGCGTGAGCGTTGCCATCCTGTATTTTTGCCT
GATCAACGAGCCCTGCCATC

Downstream 100 bases:

>100_bases
GGTGAGTCAGGTTGCGGCAAACGCCGCGGCATATCCGGAAAGTCGCGTATTCAGGCGCGGCACACCGGCCGCGCCTGAAG
CCTGAATCCTGACTGGGCAG

Product: ThiF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSSTTAPSDLTTSLDGSETADRARRFGGIARLYGAPALAAFEGAHVAVIGIGGVGSWVAEALARSALGTLTLIDLDNVAE
SNTNRQIHALDGNYGKPKVEAMAERIAAINPFCDVRLIEDFVEPDNFEATLGGGFDYVVDAIDSVRTKTALIAWCVEKKQ
PLITVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRGQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDMEAEHV
STSPGHTGPVGLNCAGFGSSVCVTASFGFAAAAHVLRALAKQATA

Sequences:

>Translated_285_residues
MSSTTAPSDLTTSLDGSETADRARRFGGIARLYGAPALAAFEGAHVAVIGIGGVGSWVAEALARSALGTLTLIDLDNVAE
SNTNRQIHALDGNYGKPKVEAMAERIAAINPFCDVRLIEDFVEPDNFEATLGGGFDYVVDAIDSVRTKTALIAWCVEKKQ
PLITVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRGQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDMEAEHV
STSPGHTGPVGLNCAGFGSSVCVTASFGFAAAAHVLRALAKQATA
>Mature_284_residues
SSTTAPSDLTTSLDGSETADRARRFGGIARLYGAPALAAFEGAHVAVIGIGGVGSWVAEALARSALGTLTLIDLDNVAES
NTNRQIHALDGNYGKPKVEAMAERIAAINPFCDVRLIEDFVEPDNFEATLGGGFDYVVDAIDSVRTKTALIAWCVEKKQP
LITVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRGQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDMEAEHVS
TSPGHTGPVGLNCAGFGSSVCVTASFGFAAAAHVLRALAKQATA

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=263, Percent_Identity=52.4714828897338, Blast_Score=276, Evalue=1e-75,
Organism=Escherichia coli, GI1787048, Length=125, Percent_Identity=33.6, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082356, Length=131, Percent_Identity=32.824427480916, Blast_Score=66, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321790, Length=226, Percent_Identity=27.4336283185841, Blast_Score=97, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6322825, Length=143, Percent_Identity=34.965034965035, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24582879, Length=162, Percent_Identity=29.0123456790123, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 29879; Mature: 29748

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTTAPSDLTTSLDGSETADRARRFGGIARLYGAPALAAFEGAHVAVIGIGGVGSWVAE
CCCCCCCCCCEECCCCCHHHHHHHHHCCHHHHHCCCHHHHCCCCEEEEEEECCHHHHHHH
ALARSALGTLTLIDLDNVAESNTNRQIHALDGNYGKPKVEAMAERIAAINPFCDVRLIED
HHHHHHCCEEEEEECHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
FVEPDNFEATLGGGFDYVVDAIDSVRTKTALIAWCVEKKQPLITVGGAGGQLDPTRIRID
HCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEE
DLALTIQDPLLSKVRGQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDMEAEHV
HEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCEEEECCCCHHHC
STSPGHTGPVGLNCAGFGSSVCVTASFGFAAAAHVLRALAKQATA
CCCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSTTAPSDLTTSLDGSETADRARRFGGIARLYGAPALAAFEGAHVAVIGIGGVGSWVAE
CCCCCCCCCEECCCCCHHHHHHHHHCCHHHHHCCCHHHHCCCCEEEEEEECCHHHHHHH
ALARSALGTLTLIDLDNVAESNTNRQIHALDGNYGKPKVEAMAERIAAINPFCDVRLIED
HHHHHHCCEEEEEECHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
FVEPDNFEATLGGGFDYVVDAIDSVRTKTALIAWCVEKKQPLITVGGAGGQLDPTRIRID
HCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEE
DLALTIQDPLLSKVRGQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDMEAEHV
HEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCEEEECCCCHHHC
STSPGHTGPVGLNCAGFGSSVCVTASFGFAAAAHVLRALAKQATA
CCCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]