Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is nagA [H]

Identifier: 91781691

GI number: 91781691

Start: 340510

End: 341613

Strand: Direct

Name: nagA [H]

Synonym: Bxe_A4155

Alternate gene names: 91781691

Gene position: 340510-341613 (Clockwise)

Preceding gene: 91781690

Following gene: 91781692

Centisome position: 6.96

GC content: 66.67

Gene sequence:

>1104_bases
ATGCTGACCGGAAACATACTCACCACCGATGGGTGGATTCACGGCACGCTCGAATACGAAAACGGCCGCATCACGGCGCT
CGCCGGCGACCGCGTCGATCCGTCGACCAACGACGCGCCGTACATCCTGCCCGGCTTCATCGATCTGCACGTGCATGGCG
GCGGCGGCGCCGACGTGATGGAAGGCGACCGCGCGATCGAAACCATCACCCGCACGCATGCGCGCTACGGCACGACAAGC
CTGCTCGCCACCACCATGACCGCGCCGCGCGACGAATTGATGAGCGTCGTTGCGGGGCTCGGCCACAACGCGCGGATCCG
CACGCCGGGCGGCGCGCGCGTGCTCGGCGTGCATCTGGAAGGGCCGTACATCAATCCCGGCAAGCTCGGCGCGCAACCGG
ACGCGGCGGTCTCGGCGGTAATGGACGAAGTGCTGAAGTATCTGTCCATCGCGCCGATTCGCGTGGTCACGCTGGCGCCG
GAGATTGCCGGCCATATGGAGATCATCTCCGAGATGGCGGCGCGCGGCGTGCGCGTGCAACTGGGCCATTCGCTCGGCAC
CTACGACGACGCCGTCGCCGCGCTCAAGCACGGCGCCTGCGGCTTCACGCATCTGTTCAACGCGATGTCGCCGCTGCACC
ATCGCAATCCCGGACTCGTCGGCGCGGCGCTCGCGCACGCCGAGTTCGCCGAAATCATTCCCGATCTGCTGCACGTGCAT
CCGGGTGCGATCCGCGCGGCGTTGCGCGCGATTCCGCGTCTCTACGTGGTCACGGACAGCACCTCGGCCACCGGCATGCC
CGACGGCGAATACCGCCTCGGCAGCCAGCATGTGACGAAGTGCCTCGGCGGCGTGCGTCTCGCCGACGGCACGCTCGCCG
GCAGCACCCTGACGATGGATCAGGCGCTGCGCAATCTCGTGTCGATCGGCTTGCCGATCGCCGATGTATCGAACCGTTTG
TCGCGCTACGCCGCCGACTACCTGGGCATCGAAGACCGCGGCCGCATCGCGCGCGGTGCATGGGCCGACGTGGTCGTGTT
CGATCGTGAACTGGCGTTGAGCGCGACTTACGTCGAAGGAGAAGCAATTGTCGAATATGCTTAA

Upstream 100 bases:

>100_bases
AGCGCTCGAAGCCTGCAACTCAAGCTGCGCAGCCAGCGTGCGCAGCCGCCCTCAGGCGCCATTCAGTCACGCCCCGTATC
ACGCCTCACCAGAGAGACTC

Downstream 100 bases:

>100_bases
AGAGGCGCTGGCGTCCGCTGAAACGGTCGCCGCGCAACTCATGGATACCTCGCGCGTCGAGGCATTGGCGGCGAAGCTTG
CGCAGCAGCCGCGTCATGTC

Product: N-acetylglucosamine 6-phosphate deacetylase

Products: NA

Alternate protein names: GlcNAc 6-P deacetylase [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVMEGDRAIETITRTHARYGTTS
LLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLEGPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAP
EIAGHMEIISEMAARGVRVQLGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMDQALRNLVSIGLPIADVSNRL
SRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEGEAIVEYA

Sequences:

>Translated_367_residues
MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVMEGDRAIETITRTHARYGTTS
LLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLEGPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAP
EIAGHMEIISEMAARGVRVQLGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMDQALRNLVSIGLPIADVSNRL
SRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEGEAIVEYA
>Mature_367_residues
MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVMEGDRAIETITRTHARYGTTS
LLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLEGPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAP
EIAGHMEIISEMAARGVRVQLGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMDQALRNLVSIGLPIADVSNRL
SRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEGEAIVEYA

Specific function: N-acetylglucosamine utilization. [C]

COG id: COG1820

COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nagA family [H]

Homologues:

Organism=Homo sapiens, GI21361513, Length=418, Percent_Identity=33.0143540669856, Blast_Score=168, Evalue=9e-42,
Organism=Homo sapiens, GI224922791, Length=416, Percent_Identity=33.1730769230769, Blast_Score=164, Evalue=9e-41,
Organism=Escherichia coli, GI1786892, Length=337, Percent_Identity=34.1246290801187, Blast_Score=144, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17553768, Length=344, Percent_Identity=32.8488372093023, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI19920392, Length=340, Percent_Identity=35.2941176470588, Blast_Score=178, Evalue=5e-45,
Organism=Drosophila melanogaster, GI281361140, Length=354, Percent_Identity=33.8983050847458, Blast_Score=172, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR003764
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.1.25 [H]

Molecular weight: Translated: 38826; Mature: 38826

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVM
CCCCCEEEECCEEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCHH
EGDRAIETITRTHARYGTTSLLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLE
CCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEEEC
GPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAPEIAGHMEIISEMAARGVRVQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCEEEE
LGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH
ECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMD
CHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEHH
QALRNLVSIGLPIADVSNRLSRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEG
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHEEEEEEECC
EAIVEYA
CEEEECC
>Mature Secondary Structure
MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVM
CCCCCEEEECCEEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCHH
EGDRAIETITRTHARYGTTSLLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLE
CCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEEEC
GPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAPEIAGHMEIISEMAARGVRVQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCEEEE
LGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH
ECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMD
CHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEHH
QALRNLVSIGLPIADVSNRLSRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEG
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHEEEEEEECC
EAIVEYA
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA