| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is dctB [H]
Identifier: 91781650
GI number: 91781650
Start: 299563
End: 301563
Strand: Direct
Name: dctB [H]
Synonym: Bxe_A4196
Alternate gene names: 91781650
Gene position: 299563-301563 (Clockwise)
Preceding gene: 91781649
Following gene: 91781651
Centisome position: 6.12
GC content: 65.57
Gene sequence:
>2001_bases ATGAAACCGGTGTCCGCGCGCCGAACCTCCGTGCCGTCGGCCGACGAAGCTTGCGCCGACGGCACGTCGCCTTATGCCAC AATAAACGATCCTCACCGATCGGATATTGCCAACGTGACGCGCCGCCTGCTGATCCTCTTCGCGCTCGTCGCCGGGCTCG TGGCAGCGTGCGGGCTCACGTACAGCATCGCGTGGCAAAGCGGCATCGACCATTTGCGGCGCAACGCCGCGGTGCGAGTC GACCGTACCACGAGCGCGCTGAAGAGCACGCTCGAACGCTACGAATCGCTGCCTTATCTGCTGGCGGAACACCCTATCGT GCAGGACGTGCTGGTCGATCCCAGTGCGGCCAATGTCGCGCGCGCCAATCTTTATCTCGAAGACCTGAACCGCCACGCGC GCGCCACCGTCACGTACATCATTCCGCTCGACGGCTTTTGCGTTGCGGCGAGCAACTGGCGCGGGCCGGGCAGCTTCATC GGTGCCGGCTACCAGTTCCGGCCGTATTTTCTCGACGCGGTCAAAGGCGGCGTGGGCCGCTTCTTCGGCATTGGTACGAT TTCGCAGGCGCCGGGCTACTACATCTCGCAGCCGGTGCGGCGCGACGGCAGGATTGTCGGCGTGGCGGTCGTCAAACTCG ATCTCGAATGGTTTCAGGGCGCGGATGCGTCCGAGCCGCTCGTCGTGACCGACGACCACGGCGTGATTTTTCTGTCGTCG ATACCGGCGTGGAAATACCACACGATCCGGCCGCTGTCGGGGCCGGTCGCCGATTCCATCTACCAGGCGCGTCAATACGC GCAGCAGCCGATTCCGCCGCTGCCGGTGTCGATCGAACGCACGCTCGAAGGCAACGCGCAGATCGTGCGCATTGGCGGCG GCCGCTATGCGCCACGCTATCTCGCGTCGCGGCGCGGCATGGGTGAGCCGGACTGGCATCTGATCACCATGTCGCCCGTC GATCCGGTCGACGCCGACGCGCGCAAGGCGACCATCGTCACCGGGTTCGGCTACGTATCGCTGGTGTTGCTCGCGTTCTA CTGGAGAATGCGCCGTGCTCGCGTACGCGAAGTAATGCGCAGCCGCGCGCTGCTGCAAAAGGCGTACGCCGAACTGAACC GGCGCGTCGCCGAGCGCACCGCGGATCTCTCGCAGGCGAACGAACAGTTGCAGAAAGAAGTGGCCGAACGCACGCGCGCC GAACAGGAGTTGCGCGCCGCGCATGATGAACTGATCCAGGCGAGCAAGCTCGCCGCGCTCGGTCAGATGGCGGCCGGCAT TACGCATGAACTGAATCAGCCGCTCGCCGCGTTGCGCGGTTTCTCGGACAACACACGCGTGCTGCTCGAACGCGGCGACC AGGTGTCGGCGCGCGAAAATCTCGAAGCGATCGCGGCGCTCACTGAGCGCATGGGCAAGATCACCAATCAGCTGAAACTG TTCGTCGGGCGGGCGCGGCCGCGCAGTGCGCGTGCGCCGATCGTGCGGGCGTTGCGTAACGTCGTCGCGCTGCTGCAAAA GCGCTTGCAGGGCGTCGAGGTCGAACTCGTCCTGTTCGATGCGCAAAGCGGCACGCGTGCGCCGCTGAGTCTCGCCGACG ACCATCCCGAACTGGTCGCGCATTGCGACGATCTGCGCCTCGAACAGGTGCTGATCAACCTGCTCGGCAACGCGCTCGAT GCGACTGCCGACATCAACTCGCCGCGCATTTCGATCGAGATCGAAGTCGCCGACGCGAACCTGTCGTTCGCCGTCAGCGA CAACGGCCCCGGTATTGCCGACGACGTCCTGCCGCGCCTGTTCGAGCCGTTCTTCACCACCAAGGAAATGGGCCAGGGGC TGGGACTCGGGCTGGCGATATCGTCTTCGATCGCGCGCGATTGCGGCGGCTCGCTCGTGGCGCGCAACGCGCCGGGCGGC GGTGCATTATTCGTGTTGACGCTGCGCCGCGCGCGCGTGCAGACGAGCCACACACCGGACCCGCTGACAACGGGCTCCTG A
Upstream 100 bases:
>100_bases GCCTTGCGCGGCGACGTGGCGATCAAAGAGCCGGCCGGCGTTTAAACGGCGCATCGGCAACCCGCTCCAGCGCAACCCCG ACGGCCGCGGATACCAGCGT
Downstream 100 bases:
>100_bases ATCACACGGAAAACGCCATGCTGAATCACGGCCTGCAAGTGCTGTATATCGAAGACGACGAACTGGTGCGGCGCGCCAGC GTGCAGAGTCTGCAACTGGC
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 666; Mature: 666
Protein sequence:
>666_residues MKPVSARRTSVPSADEACADGTSPYATINDPHRSDIANVTRRLLILFALVAGLVAACGLTYSIAWQSGIDHLRRNAAVRV DRTTSALKSTLERYESLPYLLAEHPIVQDVLVDPSAANVARANLYLEDLNRHARATVTYIIPLDGFCVAASNWRGPGSFI GAGYQFRPYFLDAVKGGVGRFFGIGTISQAPGYYISQPVRRDGRIVGVAVVKLDLEWFQGADASEPLVVTDDHGVIFLSS IPAWKYHTIRPLSGPVADSIYQARQYAQQPIPPLPVSIERTLEGNAQIVRIGGGRYAPRYLASRRGMGEPDWHLITMSPV DPVDADARKATIVTGFGYVSLVLLAFYWRMRRARVREVMRSRALLQKAYAELNRRVAERTADLSQANEQLQKEVAERTRA EQELRAAHDELIQASKLAALGQMAAGITHELNQPLAALRGFSDNTRVLLERGDQVSARENLEAIAALTERMGKITNQLKL FVGRARPRSARAPIVRALRNVVALLQKRLQGVEVELVLFDAQSGTRAPLSLADDHPELVAHCDDLRLEQVLINLLGNALD ATADINSPRISIEIEVADANLSFAVSDNGPGIADDVLPRLFEPFFTTKEMGQGLGLGLAISSSIARDCGGSLVARNAPGG GALFVLTLRRARVQTSHTPDPLTTGS
Sequences:
>Translated_666_residues MKPVSARRTSVPSADEACADGTSPYATINDPHRSDIANVTRRLLILFALVAGLVAACGLTYSIAWQSGIDHLRRNAAVRV DRTTSALKSTLERYESLPYLLAEHPIVQDVLVDPSAANVARANLYLEDLNRHARATVTYIIPLDGFCVAASNWRGPGSFI GAGYQFRPYFLDAVKGGVGRFFGIGTISQAPGYYISQPVRRDGRIVGVAVVKLDLEWFQGADASEPLVVTDDHGVIFLSS IPAWKYHTIRPLSGPVADSIYQARQYAQQPIPPLPVSIERTLEGNAQIVRIGGGRYAPRYLASRRGMGEPDWHLITMSPV DPVDADARKATIVTGFGYVSLVLLAFYWRMRRARVREVMRSRALLQKAYAELNRRVAERTADLSQANEQLQKEVAERTRA EQELRAAHDELIQASKLAALGQMAAGITHELNQPLAALRGFSDNTRVLLERGDQVSARENLEAIAALTERMGKITNQLKL FVGRARPRSARAPIVRALRNVVALLQKRLQGVEVELVLFDAQSGTRAPLSLADDHPELVAHCDDLRLEQVLINLLGNALD ATADINSPRISIEIEVADANLSFAVSDNGPGIADDVLPRLFEPFFTTKEMGQGLGLGLAISSSIARDCGGSLVARNAPGG GALFVLTLRRARVQTSHTPDPLTTGS >Mature_666_residues MKPVSARRTSVPSADEACADGTSPYATINDPHRSDIANVTRRLLILFALVAGLVAACGLTYSIAWQSGIDHLRRNAAVRV DRTTSALKSTLERYESLPYLLAEHPIVQDVLVDPSAANVARANLYLEDLNRHARATVTYIIPLDGFCVAASNWRGPGSFI GAGYQFRPYFLDAVKGGVGRFFGIGTISQAPGYYISQPVRRDGRIVGVAVVKLDLEWFQGADASEPLVVTDDHGVIFLSS IPAWKYHTIRPLSGPVADSIYQARQYAQQPIPPLPVSIERTLEGNAQIVRIGGGRYAPRYLASRRGMGEPDWHLITMSPV DPVDADARKATIVTGFGYVSLVLLAFYWRMRRARVREVMRSRALLQKAYAELNRRVAERTADLSQANEQLQKEVAERTRA EQELRAAHDELIQASKLAALGQMAAGITHELNQPLAALRGFSDNTRVLLERGDQVSARENLEAIAALTERMGKITNQLKL FVGRARPRSARAPIVRALRNVVALLQKRLQGVEVELVLFDAQSGTRAPLSLADDHPELVAHCDDLRLEQVLINLLGNALD ATADINSPRISIEIEVADANLSFAVSDNGPGIADDVLPRLFEPFFTTKEMGQGLGLGLAISSSIARDCGGSLVARNAPGG GALFVLTLRRARVQTSHTPDPLTTGS
Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals [H]
COG id: COG4191
COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=32.2448979591837, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788549, Length=252, Percent_Identity=29.7619047619048, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1790861, Length=233, Percent_Identity=32.618025751073, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786912, Length=287, Percent_Identity=29.616724738676, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1789149, Length=290, Percent_Identity=26.8965517241379, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI48994928, Length=264, Percent_Identity=26.5151515151515, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI87081816, Length=286, Percent_Identity=29.3706293706294, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788393, Length=258, Percent_Identity=29.8449612403101, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI145693157, Length=266, Percent_Identity=27.8195488721804, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR017055 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 72549; Mature: 72549
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVSARRTSVPSADEACADGTSPYATINDPHRSDIANVTRRLLILFALVAGLVAACGLT CCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC YSIAWQSGIDHLRRNAAVRVDRTTSALKSTLERYESLPYLLAEHPIVQDVLVDPSAANVA EEEHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCHHHHH RANLYLEDLNRHARATVTYIIPLDGFCVAASNWRGPGSFIGAGYQFRPYFLDAVKGGVGR HHHHHHHHHCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCEECHHHHHHHHCCHHH FFGIGTISQAPGYYISQPVRRDGRIVGVAVVKLDLEWFQGADASEPLVVTDDHGVIFLSS HEECCCCCCCCCCHHCCCCCCCCCEEEEEEEEEEHHHHCCCCCCCCEEEECCCCEEEEEC IPAWKYHTIRPLSGPVADSIYQARQYAQQPIPPLPVSIERTLEGNAQIVRIGGGRYAPRY CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHH LASRRGMGEPDWHLITMSPVDPVDADARKATIVTGFGYVSLVLLAFYWRMRRARVREVMR HHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH SRALLQKAYAELNRRVAERTADLSQANEQLQKEVAERTRAEQELRAAHDELIQASKLAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQMAAGITHELNQPLAALRGFSDNTRVLLERGDQVSARENLEAIAALTERMGKITNQLKL HHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FVGRARPRSARAPIVRALRNVVALLQKRLQGVEVELVLFDAQSGTRAPLSLADDHPELVA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCHHHHH HCDDLRLEQVLINLLGNALDATADINSPRISIEIEVADANLSFAVSDNGPGIADDVLPRL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHH FEPFFTTKEMGQGLGLGLAISSSIARDCGGSLVARNAPGGGALFVLTLRRARVQTSHTPD HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEHHHHHHCCCCCCC PLTTGS CCCCCC >Mature Secondary Structure MKPVSARRTSVPSADEACADGTSPYATINDPHRSDIANVTRRLLILFALVAGLVAACGLT CCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC YSIAWQSGIDHLRRNAAVRVDRTTSALKSTLERYESLPYLLAEHPIVQDVLVDPSAANVA EEEHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCHHHHH RANLYLEDLNRHARATVTYIIPLDGFCVAASNWRGPGSFIGAGYQFRPYFLDAVKGGVGR HHHHHHHHHCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCEECHHHHHHHHCCHHH FFGIGTISQAPGYYISQPVRRDGRIVGVAVVKLDLEWFQGADASEPLVVTDDHGVIFLSS HEECCCCCCCCCCHHCCCCCCCCCEEEEEEEEEEHHHHCCCCCCCCEEEECCCCEEEEEC IPAWKYHTIRPLSGPVADSIYQARQYAQQPIPPLPVSIERTLEGNAQIVRIGGGRYAPRY CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHH LASRRGMGEPDWHLITMSPVDPVDADARKATIVTGFGYVSLVLLAFYWRMRRARVREVMR HHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH SRALLQKAYAELNRRVAERTADLSQANEQLQKEVAERTRAEQELRAAHDELIQASKLAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQMAAGITHELNQPLAALRGFSDNTRVLLERGDQVSARENLEAIAALTERMGKITNQLKL HHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FVGRARPRSARAPIVRALRNVVALLQKRLQGVEVELVLFDAQSGTRAPLSLADDHPELVA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCHHHHH HCDDLRLEQVLINLLGNALDATADINSPRISIEIEVADANLSFAVSDNGPGIADDVLPRL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHH FEPFFTTKEMGQGLGLGLAISSSIARDCGGSLVARNAPGGGALFVLTLRRARVQTSHTPD HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEHHHHHHCCCCCCC PLTTGS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3671068 [H]