Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056650

Identifier: 89056650

GI number: 89056650

Start: 4270276

End: 4270623

Strand: Direct

Name: 89056650

Synonym: Jann_4159

Alternate gene names: NA

Gene position: 4270276-4270623 (Clockwise)

Preceding gene: 89056649

Following gene: 89056652

Centisome position: 98.9

GC content: 65.52

Gene sequence:

>348_bases
ATGAGCGACCAGAGGTTCATCATCGAAATGGGCATGGGCAATGACCAATACGGCCAAGACTATACCAAGGCCGCAGCCCG
CGCGATTGAGGACGCTATCCGCCATTCGGCCATCCCGATGTTCGAGGCGACGGGCCTGACCCACGATCAGATGCGCGTGC
AGGTCACGATCGGCGTGCAGGACCCCGATGCGGTGGACTGCGCCGCGTTGGCGGACGCGTTGCCCCGGGGCCGCGCGACG
GTGACGGCCGTTCACGGCGGCCTGGACGTGACCAACCCTGACACCGGCAAAACACTCGTCATTGCCTCTGCCGCCGTGGA
AGCCTTCTTGCCACGCCAGCCGGGCTAG

Upstream 100 bases:

>100_bases
CGCGAAATGGCGGGCTCGATGTGCCGCGCACCGACGGCGGCAATCCGACGGTTATTGCCAATGTTGCCATCTCGGTGGCC
CTCGACCTGGAGCACGCACA

Downstream 100 bases:

>100_bases
GCCTCCGCCAACGCTTTCATAAATCCGCGGGCCGCGCTGGTGGCGATGTCATCGGAGCGGGTCATGATCCCCACGGCCCC
TGCCGTTTGCTCAAGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSDQRFIIEMGMGNDQYGQDYTKAAARAIEDAIRHSAIPMFEATGLTHDQMRVQVTIGVQDPDAVDCAALADALPRGRAT
VTAVHGGLDVTNPDTGKTLVIASAAVEAFLPRQPG

Sequences:

>Translated_115_residues
MSDQRFIIEMGMGNDQYGQDYTKAAARAIEDAIRHSAIPMFEATGLTHDQMRVQVTIGVQDPDAVDCAALADALPRGRAT
VTAVHGGLDVTNPDTGKTLVIASAAVEAFLPRQPG
>Mature_114_residues
SDQRFIIEMGMGNDQYGQDYTKAAARAIEDAIRHSAIPMFEATGLTHDQMRVQVTIGVQDPDAVDCAALADALPRGRATV
TAVHGGLDVTNPDTGKTLVIASAAVEAFLPRQPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12181; Mature: 12050

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQRFIIEMGMGNDQYGQDYTKAAARAIEDAIRHSAIPMFEATGLTHDQMRVQVTIGVQ
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECC
DPDAVDCAALADALPRGRATVTAVHGGLDVTNPDTGKTLVIASAAVEAFLPRQPG
CCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHCCCCCC
>Mature Secondary Structure 
SDQRFIIEMGMGNDQYGQDYTKAAARAIEDAIRHSAIPMFEATGLTHDQMRVQVTIGVQ
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECC
DPDAVDCAALADALPRGRATVTAVHGGLDVTNPDTGKTLVIASAAVEAFLPRQPG
CCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA