Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056649

Identifier: 89056649

GI number: 89056649

Start: 4269929

End: 4270279

Strand: Direct

Name: 89056649

Synonym: Jann_4158

Alternate gene names: NA

Gene position: 4269929-4270279 (Clockwise)

Preceding gene: 89056647

Following gene: 89056650

Centisome position: 98.89

GC content: 60.4

Gene sequence:

>351_bases
ATGGCCGTCAAGCGTTTGCTGACTGAATTTGGCATGGGCAGCTCACTGCGCCGCCAGGACTATACAGAAGCCGCGACGCG
GGCCGTGAAGGACGCTTTGTGGCACAACTCGATCAATCTTGCGGAGCTCTTCGGCAAGCAGAAGGAAGAGATGCAGATCA
CGGTGGAGGTCGGCGTGCAGAACCCCGACGCGCTGGACACTGACAAGATCGCAGCGATCTTTCCCTATGGTCAGGTGACC
GTCGTGCCGCGAAATGGCGGGCTCGATGTGCCGCGCACCGACGGCGGCAATCCGACGGTTATTGCCAATGTTGCCATCTC
GGTGGCCCTCGACCTGGAGCACGCACAATGA

Upstream 100 bases:

>100_bases
AACAGTTAACACGTGGCCAAACGGGAATGTGACTGCGGCATTGCAGGACCGCGCACCTTGCCGCACATAAGATTGGACTG
ATTATCGGAGGGATAGGGCA

Downstream 100 bases:

>100_bases
GCGACCAGAGGTTCATCATCGAAATGGGCATGGGCAATGACCAATACGGCCAAGACTATACCAAGGCCGCAGCCCGCGCG
ATTGAGGACGCTATCCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQNPDALDTDKIAAIFPYGQVT
VVPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ

Sequences:

>Translated_116_residues
MAVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQNPDALDTDKIAAIFPYGQVT
VVPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ
>Mature_115_residues
AVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQNPDALDTDKIAAIFPYGQVTV
VPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12576; Mature: 12445

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQ
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCC
NPDALDTDKIAAIFPYGQVTVVPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ
CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCC
>Mature Secondary Structure 
AVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQ
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCC
NPDALDTDKIAAIFPYGQVTVVPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ
CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA