Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is pobA [H]

Identifier: 89056652

GI number: 89056652

Start: 4271607

End: 4272776

Strand: Direct

Name: pobA [H]

Synonym: Jann_4161

Alternate gene names: 89056652

Gene position: 4271607-4272776 (Clockwise)

Preceding gene: 89056650

Following gene: 89056653

Centisome position: 98.93

GC content: 61.03

Gene sequence:

>1170_bases
ATGAAGACCCAAGTTGCGATCATCGGCGGCGGGCCGTCCGGCCTGTTGCTGGCCCAACTTCTGCACAGACGCGGCATCGA
TAGCATCGTGTTGGAGCGCAAGACCAAAGACTACGTCCTGGGCCGGATTCGCGCGGGCGTGCTGGAACAAGGGCTTGTCG
GACTGCTGGAACAGGCGGGCTGCGCGGACCGCCTGCACGCAGAAGGGTTTACCCACGACGGCACGCTGATTTCCTACGGA
GATCAGATGTTTCGCGTGGACTTCACCGAACACGTGGGTCAGCCGGTGGTCGTCTATGGCCAAACGGAAGTGACCCAGGA
CCTTTACGCCGCCCGGGAGGCGTCGGGCGGGCAGATCGTCTACAACGTCGACGATGTGGAGATCCACGATGCCAAGAGCG
ACACGCCCTTTGTTACCTATCACGTAGACGGTCACGCTAAGCGCATCGATTGTGACTTCATTGCCGGGTGTGACGGCTTC
CACGGGATTAGCCGCAAGACCATCCCCGAAGACGCGCGGCGGGAGTTTGAGAAGATCTATCCGTTCGGCTGGCTCGGCAT
CCTGTCGGAAACGCCGCCTGTGAACCACGAGTTGATCTACGCCAACCATCCACGCGGCTTCGCGCTGTGTTCCATGCGGA
ACGCGCAGTTGAGCCGCTATTACATCCAATGCTCTCTCGATGATCATCCCGACAATTGGAGCGATCAGGCGTTTTGGGAG
GAGTTGAAGCGTCGCATCCCACCCGCGCAGGCGGATGCGCTTGTGACGGGCCCCAGTATCGAAAAATCCATCGCGCCGCT
GCGGTCCTTCGTGACCGAACCGATGCGGTGGGGGCGGCTGTTCCTGTGCGGCGACGCGGCCCATATCGTGCCACCCACCG
GGGCGAAAGGGCTCAACACCGCCGCGTCGGACGTCCATTATCTGTTCGAAGGGTTGAAGGCCTTCTACGCCGATGGGTCC
GACGAGGGCATCGACGCCTATTCCGAAAAAGCGCTCGCGCGGGTGTGGAAGGCCGAAAGGTTCTCATGGTGGTTCACGAC
GATGATGCACCGCTTCCCCGATCAGACCGCGTTTGACCTGAAAATGCAGGTGGCCGATCTGGAATTCCTGCGCGGCTCCG
CAAGTGCCCAGAAGGCCATGGCCGAAAACTACGTGGGCTTGCCCTATTGA

Upstream 100 bases:

>100_bases
GATCCATAACTTGTCCAAACTGACATCTATTCAGTGTGATACTTCATTTTTCATTGCCATTCCAGCATGGCAAACAGGGA
CAGACTTAGGTGAGGACGCC

Downstream 100 bases:

>100_bases
ACGCCCCACTGAAAGGATGTCCGATATGACGGAAAGATTTGAGACCGGCATGGCCACCCGTCGCACGGTTTTGGGGGATG
CCCATGTGGATCAGGCCACC

Product: 4-hydroxybenzoate 3-monooxygenase

Products: NA

Alternate protein names: PHBH; 4-hydroxybenzoate 3-monooxygenase [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKTQVAIIGGGPSGLLLAQLLHRRGIDSIVLERKTKDYVLGRIRAGVLEQGLVGLLEQAGCADRLHAEGFTHDGTLISYG
DQMFRVDFTEHVGQPVVVYGQTEVTQDLYAAREASGGQIVYNVDDVEIHDAKSDTPFVTYHVDGHAKRIDCDFIAGCDGF
HGISRKTIPEDARREFEKIYPFGWLGILSETPPVNHELIYANHPRGFALCSMRNAQLSRYYIQCSLDDHPDNWSDQAFWE
ELKRRIPPAQADALVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLFEGLKAFYADGS
DEGIDAYSEKALARVWKAERFSWWFTTMMHRFPDQTAFDLKMQVADLEFLRGSASAQKAMAENYVGLPY

Sequences:

>Translated_389_residues
MKTQVAIIGGGPSGLLLAQLLHRRGIDSIVLERKTKDYVLGRIRAGVLEQGLVGLLEQAGCADRLHAEGFTHDGTLISYG
DQMFRVDFTEHVGQPVVVYGQTEVTQDLYAAREASGGQIVYNVDDVEIHDAKSDTPFVTYHVDGHAKRIDCDFIAGCDGF
HGISRKTIPEDARREFEKIYPFGWLGILSETPPVNHELIYANHPRGFALCSMRNAQLSRYYIQCSLDDHPDNWSDQAFWE
ELKRRIPPAQADALVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLFEGLKAFYADGS
DEGIDAYSEKALARVWKAERFSWWFTTMMHRFPDQTAFDLKMQVADLEFLRGSASAQKAMAENYVGLPY
>Mature_389_residues
MKTQVAIIGGGPSGLLLAQLLHRRGIDSIVLERKTKDYVLGRIRAGVLEQGLVGLLEQAGCADRLHAEGFTHDGTLISYG
DQMFRVDFTEHVGQPVVVYGQTEVTQDLYAAREASGGQIVYNVDDVEIHDAKSDTPFVTYHVDGHAKRIDCDFIAGCDGF
HGISRKTIPEDARREFEKIYPFGWLGILSETPPVNHELIYANHPRGFALCSMRNAQLSRYYIQCSLDDHPDNWSDQAFWE
ELKRRIPPAQADALVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLFEGLKAFYADGS
DEGIDAYSEKALARVWKAERFSWWFTTMMHRFPDQTAFDLKMQVADLEFLRGSASAQKAMAENYVGLPY

Specific function: Unknown

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012733
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.2 [H]

Molecular weight: Translated: 43422; Mature: 43422

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQVAIIGGGPSGLLLAQLLHRRGIDSIVLERKTKDYVLGRIRAGVLEQGLVGLLEQAG
CCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
CADRLHAEGFTHDGTLISYGDQMFRVDFTEHVGQPVVVYGQTEVTQDLYAAREASGGQIV
CHHHHHCCCCCCCCEEEECCCEEEEEEHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEE
YNVDDVEIHDAKSDTPFVTYHVDGHAKRIDCDFIAGCDGFHGISRKTIPEDARREFEKIY
EECCCEEEECCCCCCCEEEEEECCCCEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHC
PFGWLGILSETPPVNHELIYANHPRGFALCSMRNAQLSRYYIQCSLDDHPDNWSDQAFWE
CCCEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHH
ELKRRIPPAQADALVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNT
HHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCHHHHCEEEEECCCCEEECCCCCCCCCH
AASDVHYLFEGLKAFYADGSDEGIDAYSEKALARVWKAERFSWWFTTMMHRFPDQTAFDL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
KMQVADLEFLRGSASAQKAMAENYVGLPY
EEEEHHHHHHHCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKTQVAIIGGGPSGLLLAQLLHRRGIDSIVLERKTKDYVLGRIRAGVLEQGLVGLLEQAG
CCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
CADRLHAEGFTHDGTLISYGDQMFRVDFTEHVGQPVVVYGQTEVTQDLYAAREASGGQIV
CHHHHHCCCCCCCCEEEECCCEEEEEEHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEE
YNVDDVEIHDAKSDTPFVTYHVDGHAKRIDCDFIAGCDGFHGISRKTIPEDARREFEKIY
EECCCEEEECCCCCCCEEEEEECCCCEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHC
PFGWLGILSETPPVNHELIYANHPRGFALCSMRNAQLSRYYIQCSLDDHPDNWSDQAFWE
CCCEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHH
ELKRRIPPAQADALVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNT
HHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCHHHHCEEEEECCCCEEECCCCCCCCCH
AASDVHYLFEGLKAFYADGSDEGIDAYSEKALARVWKAERFSWWFTTMMHRFPDQTAFDL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
KMQVADLEFLRGSASAQKAMAENYVGLPY
EEEEHHHHHHHCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2465205; 10984043; 7939628; 8555229; 8312276 [H]