Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is sam [H]

Identifier: 89055134

GI number: 89055134

Start: 2656651

End: 2657520

Strand: Direct

Name: sam [H]

Synonym: Jann_2643

Alternate gene names: 89055134

Gene position: 2656651-2657520 (Clockwise)

Preceding gene: 89055133

Following gene: 89055138

Centisome position: 61.53

GC content: 64.6

Gene sequence:

>870_bases
GTGAGCAAACTCACCCCGACCACCCAGGGCATCGTGCTGTTCCTGTCGGCGATCTTTCTGTTCTCGGCCATGGACGCCGT
GGCCAAGACATTGACGACGCGTTTTGATGTGATGCAGGTGGTCTGGGCGCGGTATGCGGGGCAAATGGTCGTTGTTGCCC
TGATCCTCTGGCCCCGCCTGTTCCGATTGATCCGCACGGCGCATCCGGGCCTGCAACTGCTCCGCTCAGCATTGCTCTTT
GCGGCAACCTGGTGCTTCTTCACGTCGCTGTCGTTCATGGAGATCGCGTCGGCCACGGCGGTGATGAACATTCACCCGGT
GCTGCTCACCCTCGGAGCGGCGCTAGTTTTGGGAGAGCGTCTGGGGGCACGGCGCATCATTGGCATCGCGCTGGCCCTCA
CGGGGGCGCTGATCATCCTGCGCCCGGGCACGGAGGTCCTGTCGTGGTCCGCGCTTCTGCCGCTGGCGGCGGGGTTCTGC
TATGCGTCCTACGCGCTGACCACCCGGTTTTTGGGCCGGGATGAGCCGATTCTGACGTCGTTCCTCTATACCGCCATCAT
CGGGACCGTCGCCGCCTCGGCCCTTGTGGTGCCCGTGTGGGACGCGCCCGCGCCCACCGATTGGGCGATTTTTCTTGGTA
TCGGGATCCTGGGGGCCGCCGGGCAGTTTCTGTTTATCCGCGCGATGATTGTGGCCGAGGCCGGGGCGATTGCGCCGTTT
GGCTATTCCGGGGTGGTCTTTTCGACGATCTGGGGCCTTGTCGTGTTCTCGGAAGTGCCGGACGGCCCGACGCTCCTCGG
GGCGATGGTGATTGTGGGGGCCGGCGTCTATGTCTGGTATCGCGAAAACCGCGCGACCGCGGCCGGTTAG

Upstream 100 bases:

>100_bases
TGGATGACATCATCGCGCTGGCCCAATCCCACGGCTACCCGTTCGAACAGCTGCGCCCCGCGTTGGAGGCCGCCGCCGCC
CGCAACACATCAACCGCTGA

Downstream 100 bases:

>100_bases
ACGCGGTCCGGGCCTCAGTCGAGCCGGGCGGCTCCCAGGATCGCGCCGTGACCATCGGTCTGCACGATCACCACATGGGC
CATATCGGCGACGGGCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRLFRLIRTAHPGLQLLRSALLF
AATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGERLGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFC
YASYALTTRFLGRDEPILTSFLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPF
GYSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG

Sequences:

>Translated_289_residues
MSKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRLFRLIRTAHPGLQLLRSALLF
AATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGERLGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFC
YASYALTTRFLGRDEPILTSFLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPF
GYSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG
>Mature_288_residues
SKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRLFRLIRTAHPGLQLLRSALLFA
ATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGERLGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFCY
ASYALTTRFLGRDEPILTSFLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPFG
YSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG

Specific function: Transports S-adenosylmethionine [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30832; Mature: 30701

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FRLIRTAHPGLQLLRSALLFAATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGER
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFCYASYALTTRFLGRDEPILTS
HCHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
FLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPF
HHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC
GYSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC
>Mature Secondary Structure 
SKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FRLIRTAHPGLQLLRSALLFAATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGER
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFCYASYALTTRFLGRDEPILTS
HCHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
FLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPF
HHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC
GYSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA