| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is thiE [H]
Identifier: 89054925
GI number: 89054925
Start: 2428213
End: 2428842
Strand: Direct
Name: thiE [H]
Synonym: Jann_2434
Alternate gene names: 89054925
Gene position: 2428213-2428842 (Clockwise)
Preceding gene: 89054921
Following gene: 89054929
Centisome position: 56.23
GC content: 65.87
Gene sequence:
>630_bases ATGGACGACGCAACCGCCCCCGAGACCCCGCAACTCTACCTCATCACGCCCACAGCGTTTGAGCCGGAGGTCTTTGCACC GCACCTGGCGACGGTTCTGGATGCCGTCGACATCGCCTGCATTCGCCTGGCCCTCGTCACGGAGGATGAGGCCGCCCTGT CACGCGCCGCCGACCAGTGCCGCGATGTGGCCCACGCCCGGGACGTGCCGCTGGTGATCGACCGGCATATCCAATTGGTG GAGCGGTTGGGCCTTGACGGCGTGCATCTGACCGACGGCGCGCGATCCGTCCGGGACACGCGCAAAGCCCTCGGCGCTGA CGCCATTATTGGCGCCTATTGCGGGAACTCTCGCCACGACGGCATGTCCGCCGGAGAGGCCGGCGCGGATTATGTCAGCT TCGGACCTGTGGGTGAGAACGCCCTCGGCGATGGCACCCGCGCGGAGCATGACTTGTTCGCCTGGTGGTCGCAGATGATT GAAGTGCCCGTCGTGGCCGAAGGCGCTTTGGACGCTGCTCTGGTGGAGACCTTCGCGCCGGTCACAGATTTCTTCGCCAT CGGGCCGGAGATCTGGCGGCATGACGATCCTCTGGCAGCGTTGCAAGGGGTGACGGCTTCGATCCTGTAG
Upstream 100 bases:
>100_bases TACCCAGCGGCGCGTGACGGCGCAAGATGTGCGCCGATTGCCTTGGCCGCAAAGGGACGGTATCAGCGCCGCACTGACCC TTTGCCGCCAGGATCCCCCG
Downstream 100 bases:
>100_bases GCTGCCCCTTGATGCGTCCGACCGCCGCAGATCGTGTGCGGACGGAACTTTCCCGCGACGCATCACGGTGACGGAAGCGC CTCCACATCCAGGCCGCCGC
Product: thiamine monophosphate synthase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MDDATAPETPQLYLITPTAFEPEVFAPHLATVLDAVDIACIRLALVTEDEAALSRAADQCRDVAHARDVPLVIDRHIQLV ERLGLDGVHLTDGARSVRDTRKALGADAIIGAYCGNSRHDGMSAGEAGADYVSFGPVGENALGDGTRAEHDLFAWWSQMI EVPVVAEGALDAALVETFAPVTDFFAIGPEIWRHDDPLAALQGVTASIL
Sequences:
>Translated_209_residues MDDATAPETPQLYLITPTAFEPEVFAPHLATVLDAVDIACIRLALVTEDEAALSRAADQCRDVAHARDVPLVIDRHIQLV ERLGLDGVHLTDGARSVRDTRKALGADAIIGAYCGNSRHDGMSAGEAGADYVSFGPVGENALGDGTRAEHDLFAWWSQMI EVPVVAEGALDAALVETFAPVTDFFAIGPEIWRHDDPLAALQGVTASIL >Mature_209_residues MDDATAPETPQLYLITPTAFEPEVFAPHLATVLDAVDIACIRLALVTEDEAALSRAADQCRDVAHARDVPLVIDRHIQLV ERLGLDGVHLTDGARSVRDTRKALGADAIIGAYCGNSRHDGMSAGEAGADYVSFGPVGENALGDGTRAEHDLFAWWSQMI EVPVVAEGALDAALVETFAPVTDFFAIGPEIWRHDDPLAALQGVTASIL
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 22239; Mature: 22239
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDATAPETPQLYLITPTAFEPEVFAPHLATVLDAVDIACIRLALVTEDEAALSRAADQC CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RDVAHARDVPLVIDRHIQLVERLGLDGVHLTDGARSVRDTRKALGADAIIGAYCGNSRHD HHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCCC GMSAGEAGADYVSFGPVGENALGDGTRAEHDLFAWWSQMIEVPVVAEGALDAALVETFAP CCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VTDFFAIGPEIWRHDDPLAALQGVTASIL HHHHHHHCHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MDDATAPETPQLYLITPTAFEPEVFAPHLATVLDAVDIACIRLALVTEDEAALSRAADQC CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RDVAHARDVPLVIDRHIQLVERLGLDGVHLTDGARSVRDTRKALGADAIIGAYCGNSRHD HHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCCC GMSAGEAGADYVSFGPVGENALGDGTRAEHDLFAWWSQMIEVPVVAEGALDAALVETFAP CCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VTDFFAIGPEIWRHDDPLAALQGVTASIL HHHHHHHCHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA