| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054929
Identifier: 89054929
GI number: 89054929
Start: 2430998
End: 2431540
Strand: Direct
Name: 89054929
Synonym: Jann_2438
Alternate gene names: NA
Gene position: 2430998-2431540 (Clockwise)
Preceding gene: 89054925
Following gene: 89054933
Centisome position: 56.3
GC content: 63.9
Gene sequence:
>543_bases TTGGGCGCCATCGGCAACGGTGTCGAGCTTCTGGAAATGACAGGAAAGGCCGATGGGCCGGAGGTGGATCTGATCCGCGA TGCCGTGCGCGCGGCTGAGGCACGCATTCGTCTGTTCCGCCTTGCCTTTGGCGGCGCCAGTTCCGGTCAGGTCACCAGCC TGCGGGAGGCCAAGACAGTGGTGGAGGGGTATTTCCACCAAAGCCGCGTGGCCGTGGTCTGGATGGCCAACTCTGATCGG TCGCGTCAGGAAACCAAAATGGCGCTTCTCATGCTGCTCTGCGCGGAAACCGCCCTGCCGATGGGCGGCACGGTGCGCAT CGGTCCGGACCCGACAGGCCATTGGCAGTTGGAGGCCACCGGCCCGCGTCTGAACATGGTGGACGCGGTTTGGGATGTTC TGCGCACGGGCACGGCCCCTCCCGATGAGCCGCTCAGACCGGCAGATGTGCAATTTCCCATGCTGTTTCAGGCCGCCCAA AGCCTGGGCCTGACCTTGAACTATGTCGCGGATGGAGAGACGTTTCGGATGTCGACCGCCTGA
Upstream 100 bases:
>100_bases GATGAAAGGCCTTGTGTAAATGCGGGACGAACGGGTTGAACCGGTGACTAGTCTGGCTGATCTGGTGGCATCGCGCCTGT GTCATGACTTAGTTAACCCA
Downstream 100 bases:
>100_bases CGCGCCAGCAATTCAGGTCCGACAGAGTCTAGGCCGGGCGCAGGTCAGATCGGGCACAAATCGGGTCGGGCGCAGCTCAG ACCGCGCGCAATCCGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MGAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTVVEGYFHQSRVAVVWMANSDR SRQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEATGPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQ SLGLTLNYVADGETFRMSTA
Sequences:
>Translated_180_residues MGAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTVVEGYFHQSRVAVVWMANSDR SRQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEATGPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQ SLGLTLNYVADGETFRMSTA >Mature_179_residues GAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTVVEGYFHQSRVAVVWMANSDRS RQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEATGPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQS LGLTLNYVADGETFRMSTA
Specific function: Unknown
COG id: COG5385
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19446; Mature: 19314
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTV CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHH VEGYFHQSRVAVVWMANSDRSRQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEAT HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEC GPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQSLGLTLNYVADGETFRMSTA CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEEECC >Mature Secondary Structure GAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTV CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHH VEGYFHQSRVAVVWMANSDRSRQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEAT HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEC GPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQSLGLTLNYVADGETFRMSTA CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA