Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054929

Identifier: 89054929

GI number: 89054929

Start: 2430998

End: 2431540

Strand: Direct

Name: 89054929

Synonym: Jann_2438

Alternate gene names: NA

Gene position: 2430998-2431540 (Clockwise)

Preceding gene: 89054925

Following gene: 89054933

Centisome position: 56.3

GC content: 63.9

Gene sequence:

>543_bases
TTGGGCGCCATCGGCAACGGTGTCGAGCTTCTGGAAATGACAGGAAAGGCCGATGGGCCGGAGGTGGATCTGATCCGCGA
TGCCGTGCGCGCGGCTGAGGCACGCATTCGTCTGTTCCGCCTTGCCTTTGGCGGCGCCAGTTCCGGTCAGGTCACCAGCC
TGCGGGAGGCCAAGACAGTGGTGGAGGGGTATTTCCACCAAAGCCGCGTGGCCGTGGTCTGGATGGCCAACTCTGATCGG
TCGCGTCAGGAAACCAAAATGGCGCTTCTCATGCTGCTCTGCGCGGAAACCGCCCTGCCGATGGGCGGCACGGTGCGCAT
CGGTCCGGACCCGACAGGCCATTGGCAGTTGGAGGCCACCGGCCCGCGTCTGAACATGGTGGACGCGGTTTGGGATGTTC
TGCGCACGGGCACGGCCCCTCCCGATGAGCCGCTCAGACCGGCAGATGTGCAATTTCCCATGCTGTTTCAGGCCGCCCAA
AGCCTGGGCCTGACCTTGAACTATGTCGCGGATGGAGAGACGTTTCGGATGTCGACCGCCTGA

Upstream 100 bases:

>100_bases
GATGAAAGGCCTTGTGTAAATGCGGGACGAACGGGTTGAACCGGTGACTAGTCTGGCTGATCTGGTGGCATCGCGCCTGT
GTCATGACTTAGTTAACCCA

Downstream 100 bases:

>100_bases
CGCGCCAGCAATTCAGGTCCGACAGAGTCTAGGCCGGGCGCAGGTCAGATCGGGCACAAATCGGGTCGGGCGCAGCTCAG
ACCGCGCGCAATCCGGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MGAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTVVEGYFHQSRVAVVWMANSDR
SRQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEATGPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQ
SLGLTLNYVADGETFRMSTA

Sequences:

>Translated_180_residues
MGAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTVVEGYFHQSRVAVVWMANSDR
SRQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEATGPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQ
SLGLTLNYVADGETFRMSTA
>Mature_179_residues
GAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTVVEGYFHQSRVAVVWMANSDRS
RQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEATGPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQS
LGLTLNYVADGETFRMSTA

Specific function: Unknown

COG id: COG5385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19446; Mature: 19314

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTV
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHH
VEGYFHQSRVAVVWMANSDRSRQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEAT
HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEC
GPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQSLGLTLNYVADGETFRMSTA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEEECC
>Mature Secondary Structure 
GAIGNGVELLEMTGKADGPEVDLIRDAVRAAEARIRLFRLAFGGASSGQVTSLREAKTV
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHH
VEGYFHQSRVAVVWMANSDRSRQETKMALLMLLCAETALPMGGTVRIGPDPTGHWQLEAT
HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEC
GPRLNMVDAVWDVLRTGTAPPDEPLRPADVQFPMLFQAAQSLGLTLNYVADGETFRMSTA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA