Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054800

Identifier: 89054800

GI number: 89054800

Start: 2312920

End: 2313642

Strand: Direct

Name: 89054800

Synonym: Jann_2309

Alternate gene names: NA

Gene position: 2312920-2313642 (Clockwise)

Preceding gene: 89054799

Following gene: 89054802

Centisome position: 53.56

GC content: 60.44

Gene sequence:

>723_bases
ATGCAATTGCCCCCTGCCCCTCCTCCTCCCCGCCGCGGGATCCTGTCGACCCTTCGGTCCAACTTTCTGACGGGGTTGAT
CGTTATCGCGCCGATCGGCATTACGATCTGGCTGATCTGGACGCTGACGGGCTGGATCGACAGCTGGGTGCTGCCATTTA
TTCCCGACGCCTATAACCCCTCGCTCCTGATCAATGACTGGACGGGCATCCAGATCAATATCCGGGGCATTGGCGTGGTG
ACCTTCCTGATTTTCACGATGTTTGTGGGGTGGGTGGCCAAGGGCCTGATCGGCCGGTCGATGATCCGGTGGGCGGAAAG
TCTTGTGCTGTCGATCCCGCTGATCCGCACGCTTTATTCCGGCCTCAAGCAAATCGCCGAAACGATCCTGCAACAGGGGC
AGCAGAACTTCGACAAGGCTTGCCTGGTGGAGTATCCGCGCAAGGGGATCTGGGCGATTGCGTTCATTTCCACGACGGCT
AAGGGGGAGATCGCCAAGCGTGCCCCCGAGGATATGGTGTCAGTTTTCCTGCCCACCACGCCGAACCCGACATCGGGCTT
CCTGCTGTTTGTGCCGGTGAAGGACGCGATTGTGCTGGATATGTCGGTGGAGGATGCGGCGAAGCTGATTATCTCGGCCG
GGCTCGTCTATCCCAACGGGCAAGACCCGACCCAACCCCCGACCCAAGGCCGGGCACCGGCGCCGGATATCTCGACCGTC
TAA

Upstream 100 bases:

>100_bases
TAAGCACACCAAATGCGGGCCTCACGGTGCCCGCGCTTGTGCGCAGCCTCTCTGCCGCCTAAATACCCCAAGACCCCTCC
GCCTGAGAGCCGCCGCCAAG

Downstream 100 bases:

>100_bases
GCGTCCCCTGCATAGGACAAGGCGCGGACCGGTCTGGCCCACGCCTCCCTTTTCACCTGGGCCTTACAACTCCGGGGGGA
GCGGCTTTTCCTTTGGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNPSLLINDWTGIQINIRGIGVV
TFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYSGLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTA
KGEIAKRAPEDMVSVFLPTTPNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV

Sequences:

>Translated_240_residues
MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNPSLLINDWTGIQINIRGIGVV
TFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYSGLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTA
KGEIAKRAPEDMVSVFLPTTPNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV
>Mature_240_residues
MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNPSLLINDWTGIQINIRGIGVV
TFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYSGLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTA
KGEIAKRAPEDMVSVFLPTTPNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26260; Mature: 26260

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC
SLLINDWTGIQINIRGIGVVTFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYS
CEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTAKGEIAKRAPEDMVSVFLPTT
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHCHHHHHEEECCCC
PNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV
CCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC
SLLINDWTGIQINIRGIGVVTFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYS
CEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTAKGEIAKRAPEDMVSVFLPTT
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHCHHHHHEEECCCC
PNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV
CCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA