Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053706

Identifier: 89053706

GI number: 89053706

Start: 1175195

End: 1176097

Strand: Direct

Name: 89053706

Synonym: Jann_1215

Alternate gene names: NA

Gene position: 1175195-1176097 (Clockwise)

Preceding gene: 89053705

Following gene: 89053707

Centisome position: 27.22

GC content: 64.45

Gene sequence:

>903_bases
ATGAGTGCTTGGATCACCTCCATCGAAGGGACGCCAGCGGGGGCGCAGGCGGCCCTGATCCTGGCGCTGTCGGCTGCCGT
TCTGCACGCCGTCTTTGGCGCATTGCAGAAGGGCCGCCACGATCCGCTTTTGGCGCGCGGGGCGATTGATGCGAGCTACG
GTCTTATGGCCGCACCCATCGCCATCTTCGTCGTACCCTGGCCCGAGCCGCATATGTGGCCGATCTTCGCGGGCGCGTTC
GTCATCCACGCGGGCTACAAATTCGCGGTCTTGGGGGCGTTTCGCCGGGGCGCGTTCACGGTCGTCTATCCGGTCATGCG
GGGGACCGGGCCGCTCTTTACGGTCATCGGTGCGTGGCTGATCTTTGGTGAGACCTTCAACGGCATCCAATGGCTTGGCG
TGGCCGTCCTGCTGGCGGGCCTCTATGGCCTCGCGGCTTACAACATGTCCCGGATCACCGTCGCGCGGGACACGTTGGTC
AACGCACTTCTTTTTGCCGTCCTCACCGGGCTCTTCGTCGCCGTCTACACCACCTATGACGCCTATGGCATCCGCGCGAC
GGCGGACCCGTTCACCTTTCTTGCGTGGTTTTTCTTCATCGACGGGTTGCTCTTCCCTGTCCTTGCCATACGCTTCTACG
CCCGGATGCCCGATAAACCGACGCTCGCGCCCCTTGCGCTGCGGGGCATTGTGGGGGGCTTCATCGCGTTTGCGTCCTTC
GGATCCATCATGCTGGCCACACGTCTGGACCAGGTCGGCGAAGCGGCGGTCCTGCGCGAAACCTCCACCGTGTTCGCGGC
CCTCATCGGCTGGCTGTTCCTGCGTGAACCGGTCGGGCCCGCCCGCGCGGCTTTGATGGGTTTGATCGCGCTCGGTGCGG
TGATAGTGGAAGCCGGAGGATAG

Upstream 100 bases:

>100_bases
GCAGATTGATGATCTGCAACCTTTCGATCCCGAAGAATTTGCCGATGCCCTTGTTGGGCTTGATCGTTCCTGATGCTTAT
CCACACGCCTTGTGGATAGA

Downstream 100 bases:

>100_bases
GAGCGCGCAATGGCCGAGAAGCAAATAAACCCGTGGCTGAAGAATGGCTTGGAACTGGGCCCGCCGATCCTATTCTTCAT
CGCATACCTGTACTTGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Integral Membrane; Transporter DME Family DMT Superfamily; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; Transporter Dme Family; DMT Family Permease

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSAWITSIEGTPAGAQAALILALSAAVLHAVFGALQKGRHDPLLARGAIDASYGLMAAPIAIFVVPWPEPHMWPIFAGAF
VIHAGYKFAVLGAFRRGAFTVVYPVMRGTGPLFTVIGAWLIFGETFNGIQWLGVAVLLAGLYGLAAYNMSRITVARDTLV
NALLFAVLTGLFVAVYTTYDAYGIRATADPFTFLAWFFFIDGLLFPVLAIRFYARMPDKPTLAPLALRGIVGGFIAFASF
GSIMLATRLDQVGEAAVLRETSTVFAALIGWLFLREPVGPARAALMGLIALGAVIVEAGG

Sequences:

>Translated_300_residues
MSAWITSIEGTPAGAQAALILALSAAVLHAVFGALQKGRHDPLLARGAIDASYGLMAAPIAIFVVPWPEPHMWPIFAGAF
VIHAGYKFAVLGAFRRGAFTVVYPVMRGTGPLFTVIGAWLIFGETFNGIQWLGVAVLLAGLYGLAAYNMSRITVARDTLV
NALLFAVLTGLFVAVYTTYDAYGIRATADPFTFLAWFFFIDGLLFPVLAIRFYARMPDKPTLAPLALRGIVGGFIAFASF
GSIMLATRLDQVGEAAVLRETSTVFAALIGWLFLREPVGPARAALMGLIALGAVIVEAGG
>Mature_299_residues
SAWITSIEGTPAGAQAALILALSAAVLHAVFGALQKGRHDPLLARGAIDASYGLMAAPIAIFVVPWPEPHMWPIFAGAFV
IHAGYKFAVLGAFRRGAFTVVYPVMRGTGPLFTVIGAWLIFGETFNGIQWLGVAVLLAGLYGLAAYNMSRITVARDTLVN
ALLFAVLTGLFVAVYTTYDAYGIRATADPFTFLAWFFFIDGLLFPVLAIRFYARMPDKPTLAPLALRGIVGGFIAFASFG
SIMLATRLDQVGEAAVLRETSTVFAALIGWLFLREPVGPARAALMGLIALGAVIVEAGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31860; Mature: 31729

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAWITSIEGTPAGAQAALILALSAAVLHAVFGALQKGRHDPLLARGAIDASYGLMAAPI
CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCE
AIFVVPWPEPHMWPIFAGAFVIHAGYKFAVLGAFRRGAFTVVYPVMRGTGPLFTVIGAWL
EEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHEEEHHHHCCCHHHHHHHHHH
IFGETFNGIQWLGVAVLLAGLYGLAAYNMSRITVARDTLVNALLFAVLTGLFVAVYTTYD
HHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGIRATADPFTFLAWFFFIDGLLFPVLAIRFYARMPDKPTLAPLALRGIVGGFIAFASF
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GSIMLATRLDQVGEAAVLRETSTVFAALIGWLFLREPVGPARAALMGLIALGAVIVEAGG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAWITSIEGTPAGAQAALILALSAAVLHAVFGALQKGRHDPLLARGAIDASYGLMAAPI
CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCE
AIFVVPWPEPHMWPIFAGAFVIHAGYKFAVLGAFRRGAFTVVYPVMRGTGPLFTVIGAWL
EEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHEEEHHHHCCCHHHHHHHHHH
IFGETFNGIQWLGVAVLLAGLYGLAAYNMSRITVARDTLVNALLFAVLTGLFVAVYTTYD
HHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGIRATADPFTFLAWFFFIDGLLFPVLAIRFYARMPDKPTLAPLALRGIVGGFIAFASF
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GSIMLATRLDQVGEAAVLRETSTVFAALIGWLFLREPVGPARAALMGLIALGAVIVEAGG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA